Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124024191

Identifier: 124024191

GI number: 124024191

Start: 2199356

End: 2200072

Strand: Reverse

Name: 124024191

Synonym: P9303_25021

Alternate gene names: NA

Gene position: 2200072-2199356 (Counterclockwise)

Preceding gene: 124024192

Following gene: 124024190

Centisome position: 82.01

GC content: 53.56

Gene sequence:

>717_bases
ATGTTTTCAGCTCCGATGCGGTTGTTGTGCTCTCCCTTGATGGTTGGCTTGCTTGTTGGCTCTAGTGGATTGATGGGCTT
AGCAAGCTCGCCTGCTCATGCTGGTGAGCTTCGTTGTGATGGCACTTTGCTGCAGCTCAGTGTTCGGGAAAGTGGAGAGC
TGCGTTCAGATCGCTTTCGTTTTTCCTTGCAAGTTGAAGCCGAGGGGAAAACTTCATCGGCAGCAATGGATCAGCTCAAT
CAGCGCTTAGCCACAGTTCGCAGTCGCGTGCGGCCACTCATCCTTGATGATCTAAAGATTCCTGCTCCACGCAGTTATGC
CATGGATGGCACTAGCGACAAACCACGCTTGCAGCGTGCTTTTACCAGCGTCAGTGGTGAGGTGGGCCGATCCAATTACG
ACGCGTTGATTCAGATCGCAGGCAGGCTGCCTGGTGTTGATTTGCAAGGCATGTCTTCACGTGCTGATCTTGCCAGTGAA
CAGCAATTGAAGAATCAGTTGTTGCGTAGGGCTCTACAGCAGGGCAAGCATCGGGCTGAAACCACCTCTGATGCACTTGG
CCTCAAGCAGGTGAGATTGCTACGCATTGATCAGCGCGGTGATGGCTCGATACGCCCGCTCAGTTTTGCAAAAGCAGCAA
GCTCACGCTTCAATCCCGACGAAGCACCGCAGCCGCGCCAGTCGCTCACGCTGAATCTCGATTACTGCTTGTCTTGA

Upstream 100 bases:

>100_bases
CCAGTCATGTTTGGTTGTGAATTGGCGCCTTTGCTATGTAATTCATTCACACTTTGATGGCTCAAGGGTGCTAGATCTAA
ATTAGGAATCTACATGTTCA

Downstream 100 bases:

>100_bases
AGACAAACAGATTCGCAGCCAATACATTTTCCTGGATGTCTTCAATGACTTGATGCGCGATCGCTTGCTTTGGATCCTCA
GCCTGCTCTTCGTGGCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MFSAPMRLLCSPLMVGLLVGSSGLMGLASSPAHAGELRCDGTLLQLSVRESGELRSDRFRFSLQVEAEGKTSSAAMDQLN
QRLATVRSRVRPLILDDLKIPAPRSYAMDGTSDKPRLQRAFTSVSGEVGRSNYDALIQIAGRLPGVDLQGMSSRADLASE
QQLKNQLLRRALQQGKHRAETTSDALGLKQVRLLRIDQRGDGSIRPLSFAKAASSRFNPDEAPQPRQSLTLNLDYCLS

Sequences:

>Translated_238_residues
MFSAPMRLLCSPLMVGLLVGSSGLMGLASSPAHAGELRCDGTLLQLSVRESGELRSDRFRFSLQVEAEGKTSSAAMDQLN
QRLATVRSRVRPLILDDLKIPAPRSYAMDGTSDKPRLQRAFTSVSGEVGRSNYDALIQIAGRLPGVDLQGMSSRADLASE
QQLKNQLLRRALQQGKHRAETTSDALGLKQVRLLRIDQRGDGSIRPLSFAKAASSRFNPDEAPQPRQSLTLNLDYCLS
>Mature_238_residues
MFSAPMRLLCSPLMVGLLVGSSGLMGLASSPAHAGELRCDGTLLQLSVRESGELRSDRFRFSLQVEAEGKTSSAAMDQLN
QRLATVRSRVRPLILDDLKIPAPRSYAMDGTSDKPRLQRAFTSVSGEVGRSNYDALIQIAGRLPGVDLQGMSSRADLASE
QQLKNQLLRRALQQGKHRAETTSDALGLKQVRLLRIDQRGDGSIRPLSFAKAASSRFNPDEAPQPRQSLTLNLDYCLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25951; Mature: 25951

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAPMRLLCSPLMVGLLVGSSGLMGLASSPAHAGELRCDGTLLQLSVRESGELRSDRFR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCEEE
FSLQVEAEGKTSSAAMDQLNQRLATVRSRVRPLILDDLKIPAPRSYAMDGTSDKPRLQRA
EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHH
FTSVSGEVGRSNYDALIQIAGRLPGVDLQGMSSRADLASEQQLKNQLLRRALQQGKHRAE
HHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
TTSDALGLKQVRLLRIDQRGDGSIRPLSFAKAASSRFNPDEAPQPRQSLTLNLDYCLS
HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHEEEEEHEECC
>Mature Secondary Structure
MFSAPMRLLCSPLMVGLLVGSSGLMGLASSPAHAGELRCDGTLLQLSVRESGELRSDRFR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCEEE
FSLQVEAEGKTSSAAMDQLNQRLATVRSRVRPLILDDLKIPAPRSYAMDGTSDKPRLQRA
EEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHH
FTSVSGEVGRSNYDALIQIAGRLPGVDLQGMSSRADLASEQQLKNQLLRRALQQGKHRAE
HHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH
TTSDALGLKQVRLLRIDQRGDGSIRPLSFAKAASSRFNPDEAPQPRQSLTLNLDYCLS
HHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHEEEEEHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA