| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024034
Identifier: 124024034
GI number: 124024034
Start: 2057403
End: 2058290
Strand: Reverse
Name: 124024034
Synonym: P9303_23411
Alternate gene names: NA
Gene position: 2058290-2057403 (Counterclockwise)
Preceding gene: 124024037
Following gene: 124024033
Centisome position: 76.73
GC content: 55.29
Gene sequence:
>888_bases ATGGCGTTCTACCGCCCCGATAGTGCTATGCAGGCTCAGCTAACGGGGCTGTTAGATCGATTGGCGGCAGAGAGGCGCCC TGGCCTTCATAACAGCGTGGCGATCAGTTGGGTTCGTTATGACTGTTCTGATCCAACTCCCGGCAGTGGTTCGGGGGCCG GTTGGTCGGATCAGCGCATTCTTTTCCCTGCCAGTGTGGTCAAGCTTGTCTATGCCCTTGCTGCTGAGGCATGGCTCCAG CGGGACCTGTTGCCAGAGGCCGATGAGCTTCGTCGGGCGATGCGAGACATGATTGCTGATTCGAGTAATGACGCTACCAG CCTTGTGTTGGATTTGCTTACCGGCACGACAAGCGGCCCATCGCTGCTGGGAGAATCTTGGCAGACTTGGCAGCAGCAGC GGCACCTGGTGAACGACTGGCTTCAGGGGTTGGGCTGGGAAGAGTTGGAAAAGGTGAACTGTTGCCAGAAGACCTGGGGT GATGGACCTTATGGTCGAGAGCGAGATTTTTATGGCGAAGGTCTCGGTAATCGCAATGCGTTAACCACCGCAGCTACAGC TCGCCTGCTTGAGTCAGTGATGACTGATGCTTTGGTGTCTCCGTTGGCCTGCAAGCGCTTGCGTCAGCTTCTTTCAAGGT CTATTGATCTCATGCAGCGCAAGGCTGATCCAGAGAATCAGGTGGATGGATTTCTTGGAGAAGGTTTGCCGGAGGGATCC CGTTTGTGGAGTAAGGCTGGCTGGATGAGTCAGGCTCGTCATGATGCGGCTTGGTGGTCTTTACAAGGAGGCAGACCGAT GCTTTTGGTGGTCTTCACTCAAGGAAGGGAGCGAGCTAATGACACAACTCTCTTGCCGGCAATAGCTCGTGAACTCAGCA AGTTATAG
Upstream 100 bases:
>100_bases AACCGTTGACTCCCTTTTGCAGTTGCCAGCAGCTGCCTGGAGCAAGAAGGTCAGTGGTGATTGGGGTGCCTAGGGTCGGC ATTGCCTGAAGTGATTAGCA
Downstream 100 bases:
>100_bases GGTTAAAAGAATTGAGGCCTCTAATTAAACTAAACGATAAAAAGTTTAATTTGTTAGGTAGCCGTATTTTAAGGTGCATT GCCAAATGTGGAGTGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MAFYRPDSAMQAQLTGLLDRLAAERRPGLHNSVAISWVRYDCSDPTPGSGSGAGWSDQRILFPASVVKLVYALAAEAWLQ RDLLPEADELRRAMRDMIADSSNDATSLVLDLLTGTTSGPSLLGESWQTWQQQRHLVNDWLQGLGWEELEKVNCCQKTWG DGPYGRERDFYGEGLGNRNALTTAATARLLESVMTDALVSPLACKRLRQLLSRSIDLMQRKADPENQVDGFLGEGLPEGS RLWSKAGWMSQARHDAAWWSLQGGRPMLLVVFTQGRERANDTTLLPAIARELSKL
Sequences:
>Translated_295_residues MAFYRPDSAMQAQLTGLLDRLAAERRPGLHNSVAISWVRYDCSDPTPGSGSGAGWSDQRILFPASVVKLVYALAAEAWLQ RDLLPEADELRRAMRDMIADSSNDATSLVLDLLTGTTSGPSLLGESWQTWQQQRHLVNDWLQGLGWEELEKVNCCQKTWG DGPYGRERDFYGEGLGNRNALTTAATARLLESVMTDALVSPLACKRLRQLLSRSIDLMQRKADPENQVDGFLGEGLPEGS RLWSKAGWMSQARHDAAWWSLQGGRPMLLVVFTQGRERANDTTLLPAIARELSKL >Mature_294_residues AFYRPDSAMQAQLTGLLDRLAAERRPGLHNSVAISWVRYDCSDPTPGSGSGAGWSDQRILFPASVVKLVYALAAEAWLQR DLLPEADELRRAMRDMIADSSNDATSLVLDLLTGTTSGPSLLGESWQTWQQQRHLVNDWLQGLGWEELEKVNCCQKTWGD GPYGRERDFYGEGLGNRNALTTAATARLLESVMTDALVSPLACKRLRQLLSRSIDLMQRKADPENQVDGFLGEGLPEGSR LWSKAGWMSQARHDAAWWSLQGGRPMLLVVFTQGRERANDTTLLPAIARELSKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32758; Mature: 32627
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYRPDSAMQAQLTGLLDRLAAERRPGLHNSVAISWVRYDCSDPTPGSGSGAGWSDQRI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEE LFPASVVKLVYALAAEAWLQRDLLPEADELRRAMRDMIADSSNDATSLVLDLLTGTTSGP ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCH SLLGESWQTWQQQRHLVNDWLQGLGWEELEKVNCCQKTWGDGPYGRERDFYGEGLGNRNA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH LTTAATARLLESVMTDALVSPLACKRLRQLLSRSIDLMQRKADPENQVDGFLGEGLPEGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH RLWSKAGWMSQARHDAAWWSLQGGRPMLLVVFTQGRERANDTTLLPAIARELSKL HHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AFYRPDSAMQAQLTGLLDRLAAERRPGLHNSVAISWVRYDCSDPTPGSGSGAGWSDQRI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEE LFPASVVKLVYALAAEAWLQRDLLPEADELRRAMRDMIADSSNDATSLVLDLLTGTTSGP ECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCH SLLGESWQTWQQQRHLVNDWLQGLGWEELEKVNCCQKTWGDGPYGRERDFYGEGLGNRNA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH LTTAATARLLESVMTDALVSPLACKRLRQLLSRSIDLMQRKADPENQVDGFLGEGLPEGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH RLWSKAGWMSQARHDAAWWSLQGGRPMLLVVFTQGRERANDTTLLPAIARELSKL HHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA