| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024032
Identifier: 124024032
GI number: 124024032
Start: 2056213
End: 2056938
Strand: Reverse
Name: 124024032
Synonym: P9303_23391
Alternate gene names: NA
Gene position: 2056938-2056213 (Counterclockwise)
Preceding gene: 124024033
Following gene: 124024026
Centisome position: 76.67
GC content: 44.63
Gene sequence:
>726_bases TTGCGACCTTTGCCGGGAGCTAATGCAGTAGAGACACTTTGCACAGGATTAGATGGATTGCTCGAAAGAGCCGCTGATTA TTATGTTCAGGGTGCACGTTTTGCAAACTGGCGTGCGGCTTTACAAATAACCTCAGATGGTTGTCCCTCTGATCTATCAA TTCGAGAAAACAGTTGGGGCCTTGCTAGATATGCTAGGTGTGTTCAAGAGTCAGGACTTGTTCCAATTGTCGAGCCTGAA ATACTTATGGATGGAAATCATAGTATTGAACAAACTGCACGTGCTCAAGAAAGAGTTATTCGTGAGGTATATCAAGCCTG CCTAGTTAATGATGTTTTGCTAGAGGGAACACTCTTGAAACCATCCATGACTGTAAAGGGTACTGATTGTGCAAAAAAAG AGGACCCTAAAACTGTGGCATCTCTCACTGTTAGAACACTAGAGAGAAGTGTGCCTTCGAGTGTTCCAGGAATTACGTTC CTGTCGGGCGGTTTGAGCGAGGAGCCTGCTTCCGTTCATCTAAACGAGATGAATTGTATTGAACGAAAATCTAGATGGAC TTTGGTTTTTTCTTACGGACGAGCCTTGCAGCATTCATGCTTAAAAGCCTGGGCTGGCTCTGACATCGCAGCTGGTCAAA AGGTACTAATAGCAAGAGCTCAGGCAAATTCAGAAGCATCATTAGGTCAGTATTTAGCAGGCTCACAGCCATCATCAGAT GAGTAG
Upstream 100 bases:
>100_bases TTATGAGGAGACTCTTTCCTGGAATCATTCTGATGGAGAGTCAATGGTCAAGAAGCTTTAAAAACTAGGGATTATTCCAG GGATTAAGGCTGACAAAGGC
Downstream 100 bases:
>100_bases CTTTTTGTAGCTGGATAGACCTATTAACAAGCTCCTAGATCAAGCAACGAGGACGTGATGGGTTCTGGACCTTCCATGGT CACGACTACCTCCACAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWGLARYARCVQESGLVPIVEPE ILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLKPSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITF LSGGLSEEPASVHLNEMNCIERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD E
Sequences:
>Translated_241_residues MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWGLARYARCVQESGLVPIVEPE ILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLKPSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITF LSGGLSEEPASVHLNEMNCIERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD E >Mature_241_residues MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWGLARYARCVQESGLVPIVEPE ILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLKPSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITF LSGGLSEEPASVHLNEMNCIERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD E
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI40354205, Length=232, Percent_Identity=50.8620689655172, Blast_Score=223, Evalue=1e-58, Organism=Homo sapiens, GI34577112, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53, Organism=Homo sapiens, GI34577110, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53, Organism=Homo sapiens, GI4557305, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53, Organism=Homo sapiens, GI193794814, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53, Organism=Homo sapiens, GI4885063, Length=231, Percent_Identity=49.3506493506493, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71983985, Length=231, Percent_Identity=49.3506493506493, Blast_Score=206, Evalue=6e-54, Organism=Caenorhabditis elegans, GI25150450, Length=224, Percent_Identity=49.5535714285714, Blast_Score=201, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71983990, Length=131, Percent_Identity=46.5648854961832, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI45553577, Length=238, Percent_Identity=49.1596638655462, Blast_Score=203, Evalue=1e-52, Organism=Drosophila melanogaster, GI221459619, Length=235, Percent_Identity=49.3617021276596, Blast_Score=202, Evalue=1e-52, Organism=Drosophila melanogaster, GI24650288, Length=235, Percent_Identity=49.3617021276596, Blast_Score=202, Evalue=1e-52, Organism=Drosophila melanogaster, GI24650282, Length=232, Percent_Identity=48.2758620689655, Blast_Score=197, Evalue=4e-51, Organism=Drosophila melanogaster, GI24650280, Length=232, Percent_Identity=48.2758620689655, Blast_Score=197, Evalue=4e-51, Organism=Drosophila melanogaster, GI24650278, Length=232, Percent_Identity=48.2758620689655, Blast_Score=197, Evalue=4e-51, Organism=Drosophila melanogaster, GI24650304, Length=239, Percent_Identity=41.4225941422594, Blast_Score=174, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 26082; Mature: 26082
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC LARYARCVQESGLVPIVEPEILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLK HHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC PSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITFLSGGLSEEPASVHLNEMNCI CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEHHHHHH ERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD HHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCC E C >Mature Secondary Structure MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC LARYARCVQESGLVPIVEPEILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLK HHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC PSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITFLSGGLSEEPASVHLNEMNCI CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEHHHHHH ERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD HHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]