Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124024032

Identifier: 124024032

GI number: 124024032

Start: 2056213

End: 2056938

Strand: Reverse

Name: 124024032

Synonym: P9303_23391

Alternate gene names: NA

Gene position: 2056938-2056213 (Counterclockwise)

Preceding gene: 124024033

Following gene: 124024026

Centisome position: 76.67

GC content: 44.63

Gene sequence:

>726_bases
TTGCGACCTTTGCCGGGAGCTAATGCAGTAGAGACACTTTGCACAGGATTAGATGGATTGCTCGAAAGAGCCGCTGATTA
TTATGTTCAGGGTGCACGTTTTGCAAACTGGCGTGCGGCTTTACAAATAACCTCAGATGGTTGTCCCTCTGATCTATCAA
TTCGAGAAAACAGTTGGGGCCTTGCTAGATATGCTAGGTGTGTTCAAGAGTCAGGACTTGTTCCAATTGTCGAGCCTGAA
ATACTTATGGATGGAAATCATAGTATTGAACAAACTGCACGTGCTCAAGAAAGAGTTATTCGTGAGGTATATCAAGCCTG
CCTAGTTAATGATGTTTTGCTAGAGGGAACACTCTTGAAACCATCCATGACTGTAAAGGGTACTGATTGTGCAAAAAAAG
AGGACCCTAAAACTGTGGCATCTCTCACTGTTAGAACACTAGAGAGAAGTGTGCCTTCGAGTGTTCCAGGAATTACGTTC
CTGTCGGGCGGTTTGAGCGAGGAGCCTGCTTCCGTTCATCTAAACGAGATGAATTGTATTGAACGAAAATCTAGATGGAC
TTTGGTTTTTTCTTACGGACGAGCCTTGCAGCATTCATGCTTAAAAGCCTGGGCTGGCTCTGACATCGCAGCTGGTCAAA
AGGTACTAATAGCAAGAGCTCAGGCAAATTCAGAAGCATCATTAGGTCAGTATTTAGCAGGCTCACAGCCATCATCAGAT
GAGTAG

Upstream 100 bases:

>100_bases
TTATGAGGAGACTCTTTCCTGGAATCATTCTGATGGAGAGTCAATGGTCAAGAAGCTTTAAAAACTAGGGATTATTCCAG
GGATTAAGGCTGACAAAGGC

Downstream 100 bases:

>100_bases
CTTTTTGTAGCTGGATAGACCTATTAACAAGCTCCTAGATCAAGCAACGAGGACGTGATGGGTTCTGGACCTTCCATGGT
CACGACTACCTCCACAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWGLARYARCVQESGLVPIVEPE
ILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLKPSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITF
LSGGLSEEPASVHLNEMNCIERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD
E

Sequences:

>Translated_241_residues
MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWGLARYARCVQESGLVPIVEPE
ILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLKPSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITF
LSGGLSEEPASVHLNEMNCIERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD
E
>Mature_241_residues
MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWGLARYARCVQESGLVPIVEPE
ILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLKPSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITF
LSGGLSEEPASVHLNEMNCIERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD
E

Specific function: Unknown

COG id: COG3588

COG function: function code G; Fructose-1,6-bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]

Homologues:

Organism=Homo sapiens, GI40354205, Length=232, Percent_Identity=50.8620689655172, Blast_Score=223, Evalue=1e-58,
Organism=Homo sapiens, GI34577112, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53,
Organism=Homo sapiens, GI34577110, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53,
Organism=Homo sapiens, GI4557305, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53,
Organism=Homo sapiens, GI193794814, Length=236, Percent_Identity=49.1525423728814, Blast_Score=206, Evalue=1e-53,
Organism=Homo sapiens, GI4885063, Length=231, Percent_Identity=49.3506493506493, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71983985, Length=231, Percent_Identity=49.3506493506493, Blast_Score=206, Evalue=6e-54,
Organism=Caenorhabditis elegans, GI25150450, Length=224, Percent_Identity=49.5535714285714, Blast_Score=201, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71983990, Length=131, Percent_Identity=46.5648854961832, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI45553577, Length=238, Percent_Identity=49.1596638655462, Blast_Score=203, Evalue=1e-52,
Organism=Drosophila melanogaster, GI221459619, Length=235, Percent_Identity=49.3617021276596, Blast_Score=202, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24650288, Length=235, Percent_Identity=49.3617021276596, Blast_Score=202, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24650282, Length=232, Percent_Identity=48.2758620689655, Blast_Score=197, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24650280, Length=232, Percent_Identity=48.2758620689655, Blast_Score=197, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24650278, Length=232, Percent_Identity=48.2758620689655, Blast_Score=197, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24650304, Length=239, Percent_Identity=41.4225941422594, Blast_Score=174, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000741
- InterPro:   IPR013785 [H]

Pfam domain/function: PF00274 Glycolytic [H]

EC number: =4.1.2.13 [H]

Molecular weight: Translated: 26082; Mature: 26082

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00158 ALDOLASE_CLASS_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
LARYARCVQESGLVPIVEPEILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLK
HHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC
PSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITFLSGGLSEEPASVHLNEMNCI
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEHHHHHH
ERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD
HHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCC
E
C
>Mature Secondary Structure
MRPLPGANAVETLCTGLDGLLERAADYYVQGARFANWRAALQITSDGCPSDLSIRENSWG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
LARYARCVQESGLVPIVEPEILMDGNHSIEQTARAQERVIREVYQACLVNDVLLEGTLLK
HHHHHHHHHHCCCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC
PSMTVKGTDCAKKEDPKTVASLTVRTLERSVPSSVPGITFLSGGLSEEPASVHLNEMNCI
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEHHHHHH
ERKSRWTLVFSYGRALQHSCLKAWAGSDIAAGQKVLIARAQANSEASLGQYLAGSQPSSD
HHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]