| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is tyrA [H]
Identifier: 124023987
GI number: 124023987
Start: 2025487
End: 2026431
Strand: Reverse
Name: tyrA [H]
Synonym: P9303_22941
Alternate gene names: 124023987
Gene position: 2026431-2025487 (Counterclockwise)
Preceding gene: 124023990
Following gene: 124023985
Centisome position: 75.54
GC content: 55.56
Gene sequence:
>945_bases ATGGACTGCAGTGCGAGAACCGAAGGGATGGAGCAGAACAAAAAAACATCACTTTGCGCTGGAGTCGTAGGGCTTGGGCT GATTGGTGGCTCCTTGGGATTGGATCTGCAGGCGCTTGGTTGGAAGGTCAATGGTCTGGTGCATCGTTCCAGTACCGCTG ATAGGGCTCGCGCTAGGGGTTTGGCTCACTTGGTGAGCACCGATCCGGGCATTCTCGCGGATTGTGATTTGGTGATCCTG GCGTTGCCTTTGGCTCAGCTGCTCAATCCAGATCCGAATCTCCTAAAGGCTTTGCCTACAGCTGCTGTGGTAACTGATGT GGGTTCAGTGAAGATGCCTGTTTTAGAGCTCTGGCGCGACCTACACCCCCGCTTTGTGGCTAGCCATCCCATGGCAGGCA CCGCTGAAGCAGGAGTGGAAGCAGGGCTGCGGGGCTTATTTCAGCAACGTCCTTGGGTAGCGACACCTGACAATCAAACA GACCTTGAGGCGCTCGAGTTGGTGCGTCGATTTGCGGTGTCTTTGGGCAGTCAATGGTTTACGGCGGATGCAGCTAACCA TGATCAAGCGGTGGCGCTGATTTCCCACCTGCCTGTGCTGGTGAGTGCTGCGTTGCTACGAACAGTGGGTGAGGAGCGTG ATCCTGCTGTTCGCGAACTCGCCAGAGTGCTGTCTTCTAGTGGTTTTGCTGATACCACCAGGGTGGGTGGTGGTAATCCC CAGTTGGGAACATCTATGGCTGAGAGCAACACCGCAGCGATCTTGCGTGGTTTGGCTGCTTATCGCTGGAGCTTGGAGCA GCTTGAGGAGGCCGTTTTGAATGGGCACTGGTCGCAGTTAAAGGCTGAATTGGAACGTTCCCAGGCATTGCGACCCAGCT TTCTTGTTGCTGCCAACAACGACCTCAATTCGCCACCCGTAACTGATGACCTCGCTGAGCCATGA
Upstream 100 bases:
>100_bases GAGCAGGTGCTTGAGCTGCTGATGGCTGCGGGCTTCGAGCATTGCGAGAGCCTAGGAAGCCGTAAACCCGAGAAAGCTCC ATGTTGATTGGTCGATCAAC
Downstream 100 bases:
>100_bases GCTGGCGACAGGTCATGAGTGCCGAGATGCTCACCCCTGCAGTACCTTCACCAGGGTGAATTGAGTCGCCACAGAGCCAG AGCCCTCGCATGGGAGTTCG
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MDCSARTEGMEQNKKTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSSTADRARARGLAHLVSTDPGILADCDLVIL ALPLAQLLNPDPNLLKALPTAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVEAGLRGLFQQRPWVATPDNQT DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPVTDDLAEP
Sequences:
>Translated_314_residues MDCSARTEGMEQNKKTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSSTADRARARGLAHLVSTDPGILADCDLVIL ALPLAQLLNPDPNLLKALPTAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVEAGLRGLFQQRPWVATPDNQT DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPVTDDLAEP >Mature_314_residues MDCSARTEGMEQNKKTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSSTADRARARGLAHLVSTDPGILADCDLVIL ALPLAQLLNPDPNLLKALPTAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVEAGLRGLFQQRPWVATPDNQT DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPVTDDLAEP
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 33344; Mature: 33344
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCSARTEGMEQNKKTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSSTADRARARG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEHHEEECCCHHHHHHHHH LAHLVSTDPGILADCDLVILALPLAQLLNPDPNLLKALPTAAVVTDVGSVKMPVLELWRD HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LHPRFVASHPMAGTAEAGVEAGLRGLFQQRPWVATPDNQTDLEALELVRRFAVSLGSQWF HCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE TADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC DLNSPPVTDDLAEP CCCCCCCCCCCCCC >Mature Secondary Structure MDCSARTEGMEQNKKTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSSTADRARARG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEHHEEECCCHHHHHHHHH LAHLVSTDPGILADCDLVILALPLAQLLNPDPNLLKALPTAAVVTDVGSVKMPVLELWRD HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LHPRFVASHPMAGTAEAGVEAGLRGLFQQRPWVATPDNQTDLEALELVRRFAVSLGSQWF HCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE TADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC DLNSPPVTDDLAEP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]