| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023980
Identifier: 124023980
GI number: 124023980
Start: 2018670
End: 2019509
Strand: Reverse
Name: 124023980
Synonym: P9303_22871
Alternate gene names: NA
Gene position: 2019509-2018670 (Counterclockwise)
Preceding gene: 124023982
Following gene: 124023977
Centisome position: 75.28
GC content: 56.19
Gene sequence:
>840_bases GTGTTTCGGCAGTTGGAATCTCTGCCGGAGCGGGAGTATGCCCAGTTGCAGATGTTGCGTAAGCGTCTTGCCAGTTTTGG ACGCGTTTGTGTGGCCTATTCCGGTGGAGTTGATAGTGCACTAGTGGCAGCGATTGCGCGAGAACAACTTGGACCCCAAG CCTTTGCTGTGACAGGGGTTTCTCCTGCACTTGCCCCTGAGCTTCTCGATGAGGCCCGTCAGCAGGCTGCCTGGCTTGAG ATTCGTCACCAGGAATGCATGACTAAGGAATTGGATGATCCGGCCTATAGCAGCAATCCCACAGACCGTTGTTTTGCTTG TAAGCGTGAATTACATCGGCATCTGGGCCCGATTGCGAAATCAGCCGGTGGAGCTCAGGTGGTGGATGGCGTGAATCACG ACGACTTGGGAGAGCATCGGCCTGGCATTGAGGCGGGCCGTCAGGCGGGTGTGCGTTCTCCGCTGGCTGAATTAGAGATT GGCAAGGCAGGTGTACGCCAGATGTCTCGAGCTCTTGGATTCCCTTGGTGGGATAAGCCCGCGCAGCCCTGCCTGGCATC ACGTTTTCCCTATGGCAATAGCATCACCGCTCAACGATTGCGTCAGGTTGGTCTGGCTGAAGCCTGGTTAAGAACGCTTG GTTTTGCTGAGGTGCGAGTGCGCAGCCAGGGCTTGGCTGCACGCATTGAAGTTCCCGCTGATCGGATTGAGGATGTGGTG CTTGAGTTGGATCGTGAGCAGGTCGTCGCGCATTTCCTTGCGCTGGGTTTCACCTCCATCAGCCTTGATCTGGAAGGTTT GGTCAGTGGCAAGCTCAATCGCACTGGCCAAGAGCATTGA
Upstream 100 bases:
>100_bases GGATGCTGCCGTCTGCGAAGCCATTGACGGGTCCTCTACGGTTGGAGCTTAACGAGATCGATGGGCTGAGAAGGTGGTTG CTGGGACGGCTGGTGCAGCG
Downstream 100 bases:
>100_bases AGGTGTGCAATGGCTTGCAGCTGTATCCCTTTCGCGACTCCTCTTTACTGCGTTGCTATCGGGGGATGATTGAACTTGCG GCTGTGGCTGATGCGCCATA
Product: ATP-utilizing enzymes of the PP-loop superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MFRQLESLPEREYAQLQMLRKRLASFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGVSPALAPELLDEARQQAAWLE IRHQECMTKELDDPAYSSNPTDRCFACKRELHRHLGPIAKSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEI GKAGVRQMSRALGFPWWDKPAQPCLASRFPYGNSITAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEVPADRIEDVV LELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQEH
Sequences:
>Translated_279_residues MFRQLESLPEREYAQLQMLRKRLASFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGVSPALAPELLDEARQQAAWLE IRHQECMTKELDDPAYSSNPTDRCFACKRELHRHLGPIAKSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEI GKAGVRQMSRALGFPWWDKPAQPCLASRFPYGNSITAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEVPADRIEDVV LELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQEH >Mature_279_residues MFRQLESLPEREYAQLQMLRKRLASFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGVSPALAPELLDEARQQAAWLE IRHQECMTKELDDPAYSSNPTDRCFACKRELHRHLGPIAKSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEI GKAGVRQMSRALGFPWWDKPAQPCLASRFPYGNSITAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEVPADRIEDVV LELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQEH
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 30610; Mature: 30610
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRQLESLPEREYAQLQMLRKRLASFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGV CCCHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCEEECCC SPALAPELLDEARQQAAWLEIRHQECMTKELDDPAYSSNPTDRCFACKRELHRHLGPIAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEIGKAGVRQMSRALGFPWWDKP CCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCC AQPCLASRFPYGNSITAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEVPADRIEDVV CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCHHHHHHHH LELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFRQLESLPEREYAQLQMLRKRLASFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGV CCCHHHHCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCEEECCC SPALAPELLDEARQQAAWLEIRHQECMTKELDDPAYSSNPTDRCFACKRELHRHLGPIAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEIGKAGVRQMSRALGFPWWDKP CCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCC AQPCLASRFPYGNSITAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEVPADRIEDVV CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCHHHHHHHH LELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQEH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]