| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023889
Identifier: 124023889
GI number: 124023889
Start: 1954493
End: 1955932
Strand: Reverse
Name: 124023889
Synonym: P9303_21961
Alternate gene names: NA
Gene position: 1955932-1954493 (Counterclockwise)
Preceding gene: 124023892
Following gene: 124023888
Centisome position: 72.91
GC content: 38.54
Gene sequence:
>1440_bases ATGCCTAGCGTCTTAGTCAAACAAAAAGTTTTAGATGGTCGTGGAGAGGTTGTGTCGTATAGACATCAGCCAGGAATCTT TGTGTATAGAGAATGGGTAAAGGAAAGGCGTGCATATAGAAGTAAAAGATTAGATGGAGCTACTAATATCAATGATGCAA AGGCCTTAGCAATAGAAATAGCATTTCAATTTGCTGGTAAAGAATCTCCTGCTAGTAAAAAGGAACAGGAGGCACTAGAC AAGAAGATTAGAACACAGTTAGTTGAAAAGGCAGTAACTGAATATCTGAAATACGAGCATAACAAGTTAGATGCGGAAAT TATCAAGAAAACTACATACGATAGAAAGCATTTAACCCTTATCAAGCACTTACTCCCATATTTAACGCAAGAAGGTATAA CTAAGACTAGACAGATTAATGAAATGACCTTCCAGAACTACTTGATATACCGAAAGGGAATGACAAAACTTACCTGGATG ACAGAGATAGTTGTTATTAAGGAGTTTTTGTCAAATTGGTTGTTGAAGCATAGGTTGATTGAACCTGAAGTTGTAGCAGA CAAGAATCTATTCCCAACAATTAAGATACGTCAGGATGACCTAATGGCTAACCCTGCTATAAATGCAGATGATTGGACTG TTATCAATAAGGAAATACGTGCATGGGTGTCACGTGGTGCTTCACATCCCAATCATCGGGTGCATTTATGGAGAACATTG TTTTGGCATTACACACTCATAGCTAAAAACACAGGTGCAAGGAACGAAGAGTTAAGGAAGTTGCGATGGAAAGATGTTGA GATTAGAGATGTGGGCCGTATCTCGGCAAGTAAGAAGCAAGAAGAAATAGAAGAGTTAGAAGCAGAGGGTATTGAAGTTA TTGATGATGGAAACAATGACAACACAGGTTGGGCTAGTAATCCAAATGAATTAGGTCGTGAAGAAAGGTTGATAGCTTAT GTAACTGTAACGTCTGGAAAGACGGGCCAAAGTAGAGAGATCCCCACCAGCATTGGCTATGCATTTGTTAGATGGCGTGA CTGTCTAAATGATTACTATCTAAAGAATGGGTTTGACAAACAGGTTTCCGGCAATGACTTAGTTTTCGCTAACATTAATA ATAATGGTAAACCTTATGTTAAATCTAACTTCAATCAAAGCTGGGCTTTAATCAGAACAGCAGTCAAATCAAGACTAAAA GGACACAAATTCAGCAATCAGAACTACACTCTATACTCACTCCGCTCAACATTCGTAGAGAACAAACTACTTGAGGGCTG CGACCTGTTCCTATTATCAAGAATATGTGGTCATGATGCAAAAGTGTTACTTAAGCATTATGAAAGACTGGACATTAGGG AACGTGCTGAAGAATTGACGGCTCTACCATTTGGTAGAACTAAGAAGCAAGATATCAAGGTCGACCTGTTTAGCAATTAA
Upstream 100 bases:
>100_bases ATGCTTAGCCAGATCTATTGGTATAACAGGCTTTCTAGTCAGGACTAGTGCGCTATACTAGCACTGAACTAGCAGATCCG TCTAGTTGAGGAGAGTAGAA
Downstream 100 bases:
>100_bases TTCACACTCACAACTGCAAGCCCCATACCAATACACCTAAAAGCAAGCAGAAATGCAGGTTTTAGGGTCTTTTTGTGAAG ATATACATCATTATAGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MPSVLVKQKVLDGRGEVVSYRHQPGIFVYREWVKERRAYRSKRLDGATNINDAKALAIEIAFQFAGKESPASKKEQEALD KKIRTQLVEKAVTEYLKYEHNKLDAEIIKKTTYDRKHLTLIKHLLPYLTQEGITKTRQINEMTFQNYLIYRKGMTKLTWM TEIVVIKEFLSNWLLKHRLIEPEVVADKNLFPTIKIRQDDLMANPAINADDWTVINKEIRAWVSRGASHPNHRVHLWRTL FWHYTLIAKNTGARNEELRKLRWKDVEIRDVGRISASKKQEEIEELEAEGIEVIDDGNNDNTGWASNPNELGREERLIAY VTVTSGKTGQSREIPTSIGYAFVRWRDCLNDYYLKNGFDKQVSGNDLVFANINNNGKPYVKSNFNQSWALIRTAVKSRLK GHKFSNQNYTLYSLRSTFVENKLLEGCDLFLLSRICGHDAKVLLKHYERLDIRERAEELTALPFGRTKKQDIKVDLFSN
Sequences:
>Translated_479_residues MPSVLVKQKVLDGRGEVVSYRHQPGIFVYREWVKERRAYRSKRLDGATNINDAKALAIEIAFQFAGKESPASKKEQEALD KKIRTQLVEKAVTEYLKYEHNKLDAEIIKKTTYDRKHLTLIKHLLPYLTQEGITKTRQINEMTFQNYLIYRKGMTKLTWM TEIVVIKEFLSNWLLKHRLIEPEVVADKNLFPTIKIRQDDLMANPAINADDWTVINKEIRAWVSRGASHPNHRVHLWRTL FWHYTLIAKNTGARNEELRKLRWKDVEIRDVGRISASKKQEEIEELEAEGIEVIDDGNNDNTGWASNPNELGREERLIAY VTVTSGKTGQSREIPTSIGYAFVRWRDCLNDYYLKNGFDKQVSGNDLVFANINNNGKPYVKSNFNQSWALIRTAVKSRLK GHKFSNQNYTLYSLRSTFVENKLLEGCDLFLLSRICGHDAKVLLKHYERLDIRERAEELTALPFGRTKKQDIKVDLFSN >Mature_478_residues PSVLVKQKVLDGRGEVVSYRHQPGIFVYREWVKERRAYRSKRLDGATNINDAKALAIEIAFQFAGKESPASKKEQEALDK KIRTQLVEKAVTEYLKYEHNKLDAEIIKKTTYDRKHLTLIKHLLPYLTQEGITKTRQINEMTFQNYLIYRKGMTKLTWMT EIVVIKEFLSNWLLKHRLIEPEVVADKNLFPTIKIRQDDLMANPAINADDWTVINKEIRAWVSRGASHPNHRVHLWRTLF WHYTLIAKNTGARNEELRKLRWKDVEIRDVGRISASKKQEEIEELEAEGIEVIDDGNNDNTGWASNPNELGREERLIAYV TVTSGKTGQSREIPTSIGYAFVRWRDCLNDYYLKNGFDKQVSGNDLVFANINNNGKPYVKSNFNQSWALIRTAVKSRLKG HKFSNQNYTLYSLRSTFVENKLLEGCDLFLLSRICGHDAKVLLKHYERLDIRERAEELTALPFGRTKKQDIKVDLFSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55747; Mature: 55616
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVLVKQKVLDGRGEVVSYRHQPGIFVYREWVKERRAYRSKRLDGATNINDAKALAIEI CCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEE AFQFAGKESPASKKEQEALDKKIRTQLVEKAVTEYLKYEHNKLDAEIIKKTTYDRKHLTL EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH IKHLLPYLTQEGITKTRQINEMTFQNYLIYRKGMTKLTWMTEIVVIKEFLSNWLLKHRLI HHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EPEVVADKNLFPTIKIRQDDLMANPAINADDWTVINKEIRAWVSRGASHPNHRVHLWRTL CCHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH FWHYTLIAKNTGARNEELRKLRWKDVEIRDVGRISASKKQEEIEELEAEGIEVIDDGNND HHHHHEEECCCCCCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCC NTGWASNPNELGREERLIAYVTVTSGKTGQSREIPTSIGYAFVRWRDCLNDYYLKNGFDK CCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC QVSGNDLVFANINNNGKPYVKSNFNQSWALIRTAVKSRLKGHKFSNQNYTLYSLRSTFVE CCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH NKLLEGCDLFLLSRICGHDAKVLLKHYERLDIRERAEELTALPFGRTKKQDIKVDLFSN HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCC >Mature Secondary Structure PSVLVKQKVLDGRGEVVSYRHQPGIFVYREWVKERRAYRSKRLDGATNINDAKALAIEI CCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEE AFQFAGKESPASKKEQEALDKKIRTQLVEKAVTEYLKYEHNKLDAEIIKKTTYDRKHLTL EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH IKHLLPYLTQEGITKTRQINEMTFQNYLIYRKGMTKLTWMTEIVVIKEFLSNWLLKHRLI HHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC EPEVVADKNLFPTIKIRQDDLMANPAINADDWTVINKEIRAWVSRGASHPNHRVHLWRTL CCHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH FWHYTLIAKNTGARNEELRKLRWKDVEIRDVGRISASKKQEEIEELEAEGIEVIDDGNND HHHHHEEECCCCCCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCC NTGWASNPNELGREERLIAYVTVTSGKTGQSREIPTSIGYAFVRWRDCLNDYYLKNGFDK CCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC QVSGNDLVFANINNNGKPYVKSNFNQSWALIRTAVKSRLKGHKFSNQNYTLYSLRSTFVE CCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHH NKLLEGCDLFLLSRICGHDAKVLLKHYERLDIRERAEELTALPFGRTKKQDIKVDLFSN HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA