| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is mtnD [H]
Identifier: 124023853
GI number: 124023853
Start: 1919014
End: 1919670
Strand: Direct
Name: mtnD [H]
Synonym: P9303_21601
Alternate gene names: 124023853
Gene position: 1919014-1919670 (Clockwise)
Preceding gene: 124023850
Following gene: 124023859
Centisome position: 71.53
GC content: 55.4
Gene sequence:
>657_bases TTGAAACAGCAGGGCTCGACAAAGCCGAACGAAACATTCAGCCGTCGTTCTAAGACGCCACGATCAAGATGGCTGCAAAG ACCCCTTCAACCTCTGGGAATGAGTCGCCTCAGCATCCACCCCGAAGGCAACACCAACGCCACAAGCCCGGCGGAACCCT TATTGGAGAGCGATGATCCTGCAGTGATCAAAGCCGAGCTGGCCAAACGGGGCATTGAATTCCAGCATTGGCCAGCCAAA GTCAAGCTCCATCAGAACTCAATCGAGTCAGACATCCTTGCGGCCTACGCCGTCGAGATCGCCCGAGTGCAGGCTGATGG CCGTTACCCCACGGTGGATGCAATCCGAATCACGCCAGACCACCCCGATCGTGAAGCACTGCGCCAAAAATTCTTAGCCG AACACACCCATGCCGAAGACGAGGTTCGCTTCTTTGTAGAAGGCCGTGGCTTGTTCTGCTTACACATCGGCGCTGAAGTG CTGCAAGTGCTGTGCGAACAAAACGACTGCATCAACGTGCCTGCCGGAACTCGCCATTGGTTCGATATGGGCAGCAAGCC ACAGTTTTGTGCTGTGCGCTTCTTCGATAACCCAGAAGGCTGGATTGCAAGCTTCACAGGGGATGCGATCGCCGAGAGAT TCGCCAAACTGCCATAA
Upstream 100 bases:
>100_bases GGATAGGCCACAACAGTGGCCGCTTCAATCGCCTCAATGGCAGCCAGGGTCAACAGGGCAGGATCACCAGGGCCCACCCC GACCAGGATGAGAGCTGTAG
Downstream 100 bases:
>100_bases AGCTGATCGGCTTCAGCTATGCATGCGTGGCTGAGGATGCAAGTTGGCGAGGATCCCTGCCTCCACCGCTGCCAACTCCT GCAAACGAGCAATGATCAGC
Product: methionine salvage pathway enzyme E-2/E-2'-like protein
Products: NA
Alternate protein names: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD [H]
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKQQGSTKPNETFSRRSKTPRSRWLQRPLQPLGMSRLSIHPEGNTNATSPAEPLLESDDPAVIKAELAKRGIEFQHWPAK VKLHQNSIESDILAAYAVEIARVQADGRYPTVDAIRITPDHPDREALRQKFLAEHTHAEDEVRFFVEGRGLFCLHIGAEV LQVLCEQNDCINVPAGTRHWFDMGSKPQFCAVRFFDNPEGWIASFTGDAIAERFAKLP
Sequences:
>Translated_218_residues MKQQGSTKPNETFSRRSKTPRSRWLQRPLQPLGMSRLSIHPEGNTNATSPAEPLLESDDPAVIKAELAKRGIEFQHWPAK VKLHQNSIESDILAAYAVEIARVQADGRYPTVDAIRITPDHPDREALRQKFLAEHTHAEDEVRFFVEGRGLFCLHIGAEV LQVLCEQNDCINVPAGTRHWFDMGSKPQFCAVRFFDNPEGWIASFTGDAIAERFAKLP >Mature_218_residues MKQQGSTKPNETFSRRSKTPRSRWLQRPLQPLGMSRLSIHPEGNTNATSPAEPLLESDDPAVIKAELAKRGIEFQHWPAK VKLHQNSIESDILAAYAVEIARVQADGRYPTVDAIRITPDHPDREALRQKFLAEHTHAEDEVRFFVEGRGLFCLHIGAEV LQVLCEQNDCINVPAGTRHWFDMGSKPQFCAVRFFDNPEGWIASFTGDAIAERFAKLP
Specific function: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- me
COG id: COG1791
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acireductone dioxygenase (ARD) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004313 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF03079 ARD [H]
EC number: =1.13.11.54; =1.13.11.53 [H]
Molecular weight: Translated: 24597; Mature: 24597
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQGSTKPNETFSRRSKTPRSRWLQRPLQPLGMSRLSIHPEGNTNATSPAEPLLESDDP CCCCCCCCCCHHHHHHCCCHHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC AVIKAELAKRGIEFQHWPAKVKLHQNSIESDILAAYAVEIARVQADGRYPTVDAIRITPD CEEHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCC HPDREALRQKFLAEHTHAEDEVRFFVEGRGLFCLHIGAEVLQVLCEQNDCINVPAGTRHW CCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCCEEECCCCCCHH FDMGSKPQFCAVRFFDNPEGWIASFTGDAIAERFAKLP HCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCC >Mature Secondary Structure MKQQGSTKPNETFSRRSKTPRSRWLQRPLQPLGMSRLSIHPEGNTNATSPAEPLLESDDP CCCCCCCCCCHHHHHHCCCHHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC AVIKAELAKRGIEFQHWPAKVKLHQNSIESDILAAYAVEIARVQADGRYPTVDAIRITPD CEEHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCC HPDREALRQKFLAEHTHAEDEVRFFVEGRGLFCLHIGAEVLQVLCEQNDCINVPAGTRHW CCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCCEEECCCCCCHH FDMGSKPQFCAVRFFDNPEGWIASFTGDAIAERFAKLP HCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA