BacMap

Definition	Prochlorococcus marinus str. MIT 9303, complete genome.
Accession	NC_008820
Length	2,682,675

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The map label for this gene is 124023829

Identifier: 124023829

GI number: 124023829

Start: 1899498

End: 1900136

Strand: Reverse

Name: 124023829

Synonym: P9303_21361

Alternate gene names: NA

Gene position: 1900136-1899498 (Counterclockwise)

Preceding gene: 124023831

Following gene: 124023828

Centisome position: 70.83

GC content: 41.63

Gene sequence:

>639_bases
ATGCGATTAGACTGGATAATCGCAATTCTATTCTGTATTGAATATTGCATTAGGCTATGGGTTTCGCCTCTAGATGGCAG
GTATGGGAAAGGCATTAGGGGGATTGTTAATTATGTATTGTCGCCATTGGCAATGGTTGATGTGATCGCTATATTGCCTA
CTTTTCTAGGGATAATCAGTCCAGAGCTCTATACTCTAAGAGTCTTTCGACTTGTAAGAATTGGCAAGATAGGGAGGTCT
AGGAGGTTTAAAGAAGGCTTATATTATTTTAATCAGGCAATCAAATCAAAGATTCAAGAACTACAGATATCAGCAACCTA
TACCCTCATGTTGGTGCTATTAAGTAGCACCTTTATGTATCTGACTGAGTCAAAGGTACAGCCTGAATTATTTGGATCAA
TACCTCGATGCATCTGGTGGGCGATAATGACAGTGACAACAGTTGGTTATGGAGATGCCATCCCTGTGACTGGGCTTGGC
AAGGTGATTGCGTCTGCAACAGCATTGATGGGTATCGGTGTCATCGCCATACCAGTAGGAATCCTTGCCGCTGGTTTTAG
CGAATCATTCAGGAAGAAGAGAATTGAGAATGAGAAGATAGTTCAACAAGAGAATTCAGTTGATTCCGTAGGTCGATGA

Upstream 100 bases:

>100_bases
TGTGTTTAATAGAAGCATAGCTGCTGCAATTGTAATATCAATCTTCTTTTCCATTATTGCTACTGAGGAGGCTATTCAGG
CAAAGTATGGAGACCATTTG

Downstream 100 bases:

>100_bases
TGCTAAGAATGTGCAGAAACTACTTTCATATGACTCAATTATTGCTGGCTTTTAATATCGTATGTCTTTGGTCAATGCTC
GCAACACTACTAGATCTATC

Product: potassium channel, VIC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRLDWIIAILFCIEYCIRLWVSPLDGRYGKGIRGIVNYVLSPLAMVDVIAILPTFLGIISPELYTLRVFRLVRIGKIGRS
RRFKEGLYYFNQAIKSKIQELQISATYTLMLVLLSSTFMYLTESKVQPELFGSIPRCIWWAIMTVTTVGYGDAIPVTGLG
KVIASATALMGIGVIAIPVGILAAGFSESFRKKRIENEKIVQQENSVDSVGR

Sequences:

>Translated_212_residues
MRLDWIIAILFCIEYCIRLWVSPLDGRYGKGIRGIVNYVLSPLAMVDVIAILPTFLGIISPELYTLRVFRLVRIGKIGRS
RRFKEGLYYFNQAIKSKIQELQISATYTLMLVLLSSTFMYLTESKVQPELFGSIPRCIWWAIMTVTTVGYGDAIPVTGLG
KVIASATALMGIGVIAIPVGILAAGFSESFRKKRIENEKIVQQENSVDSVGR
>Mature_212_residues
MRLDWIIAILFCIEYCIRLWVSPLDGRYGKGIRGIVNYVLSPLAMVDVIAILPTFLGIISPELYTLRVFRLVRIGKIGRS
RRFKEGLYYFNQAIKSKIQELQISATYTLMLVLLSSTFMYLTESKVQPELFGSIPRCIWWAIMTVTTVGYGDAIPVTGLG
KVIASATALMGIGVIAIPVGILAAGFSESFRKKRIENEKIVQQENSVDSVGR

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI27436981, Length=209, Percent_Identity=31.1004784688995, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI27436984, Length=209, Percent_Identity=31.5789473684211, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI27436974, Length=213, Percent_Identity=30.0469483568075, Blast_Score=110, Evalue=9e-25,
Organism=Homo sapiens, GI4826784, Length=213, Percent_Identity=30.0469483568075, Blast_Score=109, Evalue=1e-24,
Organism=Homo sapiens, GI9789987, Length=209, Percent_Identity=32.5358851674641, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI27436986, Length=209, Percent_Identity=31.5789473684211, Blast_Score=107, Evalue=6e-24,
Organism=Homo sapiens, GI4504817, Length=216, Percent_Identity=29.1666666666667, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI236462079, Length=209, Percent_Identity=30.1435406698565, Blast_Score=105, Evalue=2e-23,
Organism=Homo sapiens, GI236461942, Length=209, Percent_Identity=30.1435406698565, Blast_Score=105, Evalue=2e-23,
Organism=Homo sapiens, GI28373065, Length=209, Percent_Identity=30.1435406698565, Blast_Score=105, Evalue=2e-23,
Organism=Homo sapiens, GI119395748, Length=208, Percent_Identity=31.25, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI4826782, Length=209, Percent_Identity=31.1004784688995, Blast_Score=103, Evalue=9e-23,
Organism=Homo sapiens, GI88758565, Length=206, Percent_Identity=31.5533980582524, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI20070166, Length=196, Percent_Identity=34.1836734693878, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI25952087, Length=223, Percent_Identity=28.6995515695067, Blast_Score=100, Evalue=7e-22,
Organism=Homo sapiens, GI25952092, Length=201, Percent_Identity=32.3383084577114, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI236462242, Length=209, Percent_Identity=30.1435406698565, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI236461719, Length=209, Percent_Identity=30.1435406698565, Blast_Score=98, Evalue=4e-21,
Organism=Homo sapiens, GI26638655, Length=209, Percent_Identity=30.622009569378, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI26638653, Length=209, Percent_Identity=30.622009569378, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI13492973, Length=227, Percent_Identity=29.5154185022026, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI26051264, Length=207, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI26051262, Length=207, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI26051260, Length=207, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI26051266, Length=207, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI4504821, Length=211, Percent_Identity=28.436018957346, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI5031819, Length=137, Percent_Identity=36.4963503649635, Blast_Score=94, Evalue=8e-20,
Organism=Homo sapiens, GI26051268, Length=207, Percent_Identity=26.0869565217391, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI32479525, Length=212, Percent_Identity=25.9433962264151, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI4758630, Length=225, Percent_Identity=29.7777777777778, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI32479527, Length=212, Percent_Identity=26.8867924528302, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI27436988, Length=211, Percent_Identity=28.9099526066351, Blast_Score=88, Evalue=4e-18,
Organism=Homo sapiens, GI25952108, Length=192, Percent_Identity=28.6458333333333, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI45383011, Length=195, Percent_Identity=29.2307692307692, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI21217563, Length=199, Percent_Identity=28.643216080402, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI24497460, Length=199, Percent_Identity=29.1457286432161, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI27436996, Length=220, Percent_Identity=25.9090909090909, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI19424136, Length=222, Percent_Identity=28.8288288288288, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI4826786, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI24497458, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI163792201, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI21217561, Length=202, Percent_Identity=28.2178217821782, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI88758576, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI24497462, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI27436993, Length=179, Percent_Identity=25.6983240223464, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI19071574, Length=179, Percent_Identity=25.6983240223464, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI7657289, Length=173, Percent_Identity=27.1676300578035, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI6912444, Length=196, Percent_Identity=25.5102040816327, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71989369, Length=194, Percent_Identity=35.5670103092784, Blast_Score=116, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI71989381, Length=194, Percent_Identity=35.5670103092784, Blast_Score=116, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI71989376, Length=194, Percent_Identity=35.5670103092784, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71989361, Length=194, Percent_Identity=35.5670103092784, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17544122, Length=209, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71994134, Length=196, Percent_Identity=30.6122448979592, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI193206869, Length=219, Percent_Identity=28.310502283105, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI25148255, Length=222, Percent_Identity=29.2792792792793, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71994313, Length=209, Percent_Identity=30.1435406698565, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985535, Length=218, Percent_Identity=29.8165137614679, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193207406, Length=217, Percent_Identity=30.8755760368664, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25147238, Length=195, Percent_Identity=30.7692307692308, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32564066, Length=212, Percent_Identity=24.5283018867925, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25147242, Length=195, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71986003, Length=195, Percent_Identity=34.8717948717949, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71986011, Length=193, Percent_Identity=32.6424870466321, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71986008, Length=195, Percent_Identity=34.8717948717949, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71994320, Length=180, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32564076, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI32564084, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI32564088, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI32564090, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI32564082, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI32564086, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564080, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI72000220, Length=192, Percent_Identity=28.6458333333333, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17569273, Length=200, Percent_Identity=28, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71986574, Length=162, Percent_Identity=26.5432098765432, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115532628, Length=168, Percent_Identity=30.952380952381, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71998749, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32564068, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32564074, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32564070, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32564072, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281365536, Length=214, Percent_Identity=32.2429906542056, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI116007764, Length=214, Percent_Identity=32.2429906542056, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24656289, Length=214, Percent_Identity=32.2429906542056, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24656294, Length=214, Percent_Identity=32.2429906542056, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI17737641, Length=209, Percent_Identity=31.1004784688995, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24642914, Length=227, Percent_Identity=29.0748898678414, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI161084970, Length=209, Percent_Identity=31.1004784688995, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24642916, Length=227, Percent_Identity=29.0748898678414, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281363097, Length=214, Percent_Identity=30.8411214953271, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24642910, Length=227, Percent_Identity=28.6343612334802, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI45555859, Length=227, Percent_Identity=28.6343612334802, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI45549143, Length=227, Percent_Identity=28.6343612334802, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI221330117, Length=214, Percent_Identity=30.8411214953271, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI221330119, Length=216, Percent_Identity=31.4814814814815, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI281363095, Length=214, Percent_Identity=30.8411214953271, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI161076829, Length=191, Percent_Identity=31.413612565445, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI17136468, Length=180, Percent_Identity=28.3333333333333, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28574020, Length=180, Percent_Identity=28.3333333333333, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221330674, Length=180, Percent_Identity=28.3333333333333, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 23689; Mature: 23689

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDWIIAILFCIEYCIRLWVSPLDGRYGKGIRGIVNYVLSPLAMVDVIAILPTFLGIIS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PELYTLRVFRLVRIGKIGRSRRFKEGLYYFNQAIKSKIQELQISATYTLMLVLLSSTFMY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTESKVQPELFGSIPRCIWWAIMTVTTVGYGDAIPVTGLGKVIASATALMGIGVIAIPVG
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILAAGFSESFRKKRIENEKIVQQENSVDSVGR
HHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLDWIIAILFCIEYCIRLWVSPLDGRYGKGIRGIVNYVLSPLAMVDVIAILPTFLGIIS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PELYTLRVFRLVRIGKIGRSRRFKEGLYYFNQAIKSKIQELQISATYTLMLVLLSSTFMY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTESKVQPELFGSIPRCIWWAIMTVTTVGYGDAIPVTGLGKVIASATALMGIGVIAIPVG
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILAAGFSESFRKKRIENEKIVQQENSVDSVGR
HHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]