Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023827

Identifier: 124023827

GI number: 124023827

Start: 1897690

End: 1898718

Strand: Reverse

Name: 124023827

Synonym: P9303_21341

Alternate gene names: NA

Gene position: 1898718-1897690 (Counterclockwise)

Preceding gene: 124023828

Following gene: 124023825

Centisome position: 70.78

GC content: 40.72

Gene sequence:

>1029_bases
ATGGATCCGAAACCTTTGATATTTGCCCAATCACTTGTTCTTAGTGGCCCTGCACGTGACCTGGGTAGGAATTTTATAAA
AGGCATTGACCTTTATCTTAAAAAGGTCAATGATCAAGGTGGTATAGATGGTCGCCCGATCATGATATGGAGATTAGACG
ATGGCTATGAACCAGAAAATGCTTATAATAATACAAGTCAATTTGTTAGTTACTCGCAACTTCTTGGATTATTTGGTTAT
ATCGGCACACCAACGACAAAAGCTTCACTCCCACTAGCTAAGGCTGCTGAAATTGATATTATCTCACCATTCACTGGAGC
AAGTGTATTGCGTGGAGAAAATAATGCCTACACAATTCATCATCGCGCTAGTTATGCGGATGAAGCGAAAAGGATTGTTG
ATTATTTGGTTAATGATGGATTTGTTCGCATCGCAATAGGATATCAAAATGATTCTTATGGCAAAGATGTATTAAATAGT
CTTATAGAGGAATTAGCTGACCCTCATATGCTATCGCCAGTGATAAGTGTTCCTCTCGTGAGAAATTCAAGAGACACGGG
TAATGCAGCAAAAGAAATTAAAGCTCATAATCCCGATGCTCTTATTGCGATTTCAACTTACCAGACAGTCGCCAGTCTTA
TTCAGAATCTTAATTCACAAGGTAGCTACCCTCAAGTTATGACAATTTCATTCACAGGTACTAAGTCACTAATCAAAGAG
TTGCCTCGTCATACTTCATTTGGGATAGGCGTTACACAAGTCGTTCCTTTCCCATGGGACCTTCGCAATCCCATAGTGCG
AGACTATCAACATGATCTACGTCATGTTGATTCAGATGCAGAATTTGATTTTGTGAGCTTGGAAGGCTATCTGATCGCGA
GGAAGCTTGTATCGGCCTTACGAAAAGCTTCACCTGTTATCAATCGATCAAGCCTGAGAGACGCATTGCTGGAGGAAAAT
GATGGGCTTATTTCTGGTGGTGTAGAAGTAGACTTAGTATTTCTTGGCACCGATCCATGGCAACCATGA

Upstream 100 bases:

>100_bases
ACTGTCTAGAAAATATCAATTAAAAGAAGACCGTGCATCAGAGATAGACAGCGTCTTAAACGGAGAAGTCTCAAATAGCA
ATATCCATAAGTTGCTTAGA

Downstream 100 bases:

>100_bases
TCAACAGCTGGATTTAGTTAGTGATCGCAATCCAACAAATCGCCATGGATATTAATAGCACTAATAGAGAGATAGGAGGC
CAGCTTTTTTCTAGTAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPENAYNNTSQFVSYSQLLGLFGY
IGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIHHRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNS
LIEELADPHMLSPVISVPLVRNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE
LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSALRKASPVINRSSLRDALLEEN
DGLISGGVEVDLVFLGTDPWQP

Sequences:

>Translated_342_residues
MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPENAYNNTSQFVSYSQLLGLFGY
IGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIHHRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNS
LIEELADPHMLSPVISVPLVRNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE
LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSALRKASPVINRSSLRDALLEEN
DGLISGGVEVDLVFLGTDPWQP
>Mature_342_residues
MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPENAYNNTSQFVSYSQLLGLFGY
IGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIHHRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNS
LIEELADPHMLSPVISVPLVRNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE
LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSALRKASPVINRSSLRDALLEEN
DGLISGGVEVDLVFLGTDPWQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37718; Mature: 37718

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPEN
CCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC
AYNNTSQFVSYSQLLGLFGYIGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHEECCCCEEEEE
HRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNSLIEELADPHMLSPVISVPLV
ECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCEE
RNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE
CCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH
LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSAL
CCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH
RKASPVINRSSLRDALLEENDGLISGGVEVDLVFLGTDPWQP
HHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCC
>Mature Secondary Structure
MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPEN
CCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC
AYNNTSQFVSYSQLLGLFGYIGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHEECCCCEEEEE
HRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNSLIEELADPHMLSPVISVPLV
ECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCEE
RNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE
CCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH
LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSAL
CCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH
RKASPVINRSSLRDALLEENDGLISGGVEVDLVFLGTDPWQP
HHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA