| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023827
Identifier: 124023827
GI number: 124023827
Start: 1897690
End: 1898718
Strand: Reverse
Name: 124023827
Synonym: P9303_21341
Alternate gene names: NA
Gene position: 1898718-1897690 (Counterclockwise)
Preceding gene: 124023828
Following gene: 124023825
Centisome position: 70.78
GC content: 40.72
Gene sequence:
>1029_bases ATGGATCCGAAACCTTTGATATTTGCCCAATCACTTGTTCTTAGTGGCCCTGCACGTGACCTGGGTAGGAATTTTATAAA AGGCATTGACCTTTATCTTAAAAAGGTCAATGATCAAGGTGGTATAGATGGTCGCCCGATCATGATATGGAGATTAGACG ATGGCTATGAACCAGAAAATGCTTATAATAATACAAGTCAATTTGTTAGTTACTCGCAACTTCTTGGATTATTTGGTTAT ATCGGCACACCAACGACAAAAGCTTCACTCCCACTAGCTAAGGCTGCTGAAATTGATATTATCTCACCATTCACTGGAGC AAGTGTATTGCGTGGAGAAAATAATGCCTACACAATTCATCATCGCGCTAGTTATGCGGATGAAGCGAAAAGGATTGTTG ATTATTTGGTTAATGATGGATTTGTTCGCATCGCAATAGGATATCAAAATGATTCTTATGGCAAAGATGTATTAAATAGT CTTATAGAGGAATTAGCTGACCCTCATATGCTATCGCCAGTGATAAGTGTTCCTCTCGTGAGAAATTCAAGAGACACGGG TAATGCAGCAAAAGAAATTAAAGCTCATAATCCCGATGCTCTTATTGCGATTTCAACTTACCAGACAGTCGCCAGTCTTA TTCAGAATCTTAATTCACAAGGTAGCTACCCTCAAGTTATGACAATTTCATTCACAGGTACTAAGTCACTAATCAAAGAG TTGCCTCGTCATACTTCATTTGGGATAGGCGTTACACAAGTCGTTCCTTTCCCATGGGACCTTCGCAATCCCATAGTGCG AGACTATCAACATGATCTACGTCATGTTGATTCAGATGCAGAATTTGATTTTGTGAGCTTGGAAGGCTATCTGATCGCGA GGAAGCTTGTATCGGCCTTACGAAAAGCTTCACCTGTTATCAATCGATCAAGCCTGAGAGACGCATTGCTGGAGGAAAAT GATGGGCTTATTTCTGGTGGTGTAGAAGTAGACTTAGTATTTCTTGGCACCGATCCATGGCAACCATGA
Upstream 100 bases:
>100_bases ACTGTCTAGAAAATATCAATTAAAAGAAGACCGTGCATCAGAGATAGACAGCGTCTTAAACGGAGAAGTCTCAAATAGCA ATATCCATAAGTTGCTTAGA
Downstream 100 bases:
>100_bases TCAACAGCTGGATTTAGTTAGTGATCGCAATCCAACAAATCGCCATGGATATTAATAGCACTAATAGAGAGATAGGAGGC CAGCTTTTTTCTAGTAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPENAYNNTSQFVSYSQLLGLFGY IGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIHHRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNS LIEELADPHMLSPVISVPLVRNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSALRKASPVINRSSLRDALLEEN DGLISGGVEVDLVFLGTDPWQP
Sequences:
>Translated_342_residues MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPENAYNNTSQFVSYSQLLGLFGY IGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIHHRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNS LIEELADPHMLSPVISVPLVRNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSALRKASPVINRSSLRDALLEEN DGLISGGVEVDLVFLGTDPWQP >Mature_342_residues MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPENAYNNTSQFVSYSQLLGLFGY IGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIHHRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNS LIEELADPHMLSPVISVPLVRNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSALRKASPVINRSSLRDALLEEN DGLISGGVEVDLVFLGTDPWQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37718; Mature: 37718
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPEN CCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC AYNNTSQFVSYSQLLGLFGYIGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIH CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHEECCCCEEEEE HRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNSLIEELADPHMLSPVISVPLV ECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCEE RNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE CCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSAL CCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH RKASPVINRSSLRDALLEENDGLISGGVEVDLVFLGTDPWQP HHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCC >Mature Secondary Structure MDPKPLIFAQSLVLSGPARDLGRNFIKGIDLYLKKVNDQGGIDGRPIMIWRLDDGYEPEN CCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC AYNNTSQFVSYSQLLGLFGYIGTPTTKASLPLAKAAEIDIISPFTGASVLRGENNAYTIH CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHEECCCCEEEEE HRASYADEAKRIVDYLVNDGFVRIAIGYQNDSYGKDVLNSLIEELADPHMLSPVISVPLV ECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCEE RNSRDTGNAAKEIKAHNPDALIAISTYQTVASLIQNLNSQGSYPQVMTISFTGTKSLIKE CCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH LPRHTSFGIGVTQVVPFPWDLRNPIVRDYQHDLRHVDSDAEFDFVSLEGYLIARKLVSAL CCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH RKASPVINRSSLRDALLEENDGLISGGVEVDLVFLGTDPWQP HHHCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA