Click here to switch to the map view.

The map label for this gene is ydaO [H]

Identifier: 124023817

GI number: 124023817

Start: 1885545

End: 1887392

Strand: Reverse

Name: ydaO [H]

Synonym: P9303_21241

Alternate gene names: 124023817

Gene position: 1887392-1885545 (Counterclockwise)

Preceding gene: 124023822

Following gene: 124023815

Centisome position: 70.35

GC content: 55.14

Gene sequence:

>1848_bases
TTGAGCTTTTTCCAGAAACTTCTGGGGCATCCACTCCTCCGCAACAAGGCTGACGATGAGCGGCTGCCCAATGTTCAGGC
TCTGCCGATCCTCTCCTCGGATGCCTTGTCGTCAGTGGCTTATGCCACTGAAGCTGCACTTGGTGTTCTGATTCTTGGCG
GCAGCGGTGCCCTTGGCCTTTCTGTACCGATCACCCTGGCGATTATTGCTCTGGTTGCCATCGTTGTGCTCTCCTACCGC
CAGGCGATTGAGGCTTATCCGAAAGGGGGCGGCTCTTACGTCGTGGCACGCGACAACCTTGGCCGCAACGTTGGTTTGAT
TGCAGCGGCGGCATTGCTGATCGATTACACCCTTACCGCGGGGGTGAGCTTGATGGCTGGCACTCAGGCTCTCTCCTCCC
TAGTGCCATCGATGCTCGATCACGAGGTTTCGCTCGCGTTGCTTTTGTTGGCGCTGATCGGCTGGGCCAACCTGCGCGGC
CTCAAGGAGACTGGACGGCTGTTTTCTTTGCCCACCTATGCCTTTGTGGCGATGGTGGCTTTGTTGATCCTTGCCGGTTT
GAAGGATCTGATTTTTGAGCATGGCTTCGTGCCGGATATGCCTCCAGCTGTGCAAGCCGTTCAGCCGTTGGGGTGGTTTT
TGATCCTGCGGGCCTTCAGTTCAGGTTGTTCAGCGATGACTGGTATTGAGTCCATTGCCAATGGCGTGAAGGTTTTTCAG
GAACCTGCGGTGGTCAATGCCAGACGCACGTTGTTGGTGATGGGTGTGTTGCTAGCCGCCATGTTTTTGGCGGTTAGTGG
GCTGGGTTACATGTATGGCATCGCTCCGAATGATCGGGTCACTGTGTTGGCTCAAATCGGTTCGCGGGCTTTTGGTTCGG
GCAGTGTTCTGCTTTGGGCTCTGCAGCTTTCCACTCTCTTGATCCTTGTTTTGGCGGCCAACACCGCCTTTGCAGGTTTC
CCTCGTTTAGCGGCGATGTTGGCAGAAGATCATTGCCTGCCAAGGCAGTTGAGCTGGATTGGTGATCGCTTGGTTTATCA
GAACGGTATTGGCGTTCTTTTGTTGGTCACGGCGCTGATCATCGTGATCTGCAAAGGCGATACCACTGTTGCTGTGAACC
TTTATGCCCTGGGGGTCTTCACTGCCTTCACCCTGTCTCAGCTGGGATTGGTTCGTCGTTGGTGGCGGTTGCGGGGGAAT
GGTTGGCAGGGTCGACTGTTGATGAATGCTCTTGGTGCAGTCACCACTTTTGTGGTGCTTGTGGTGATCGTGGTGAGCAA
ATTCCAGGAGGGAGCCTGGACTGTGGTGATTACCATCCCTGCATTGGTATGGGGTCTGGCGCAGATTCGACGCCGCTATC
GAAAGGCTTATGCAGCGCTCGCTTTGGAGCCTGACTTTGGCCCATTGCAGGTGGCGCCTCGCCAACCTCCTTTGGGTAAT
CACTGCATCGTTTGGATTCCGGGTTTGTGGCGTGCCTCCATGGAAGCGTTGCGTTATGGATGTTCCATTGCTGATTCCGT
GACGGCTGTCTTTGTGCTCGGCGATGATGATGATCCAGACGCAATTCGTACCGCCTGGGACAGACTTGTTGGCGATCATC
CCGGTGAACTCGAGCTCCGCCTTTTGGAGAGTCGCTTTAGTTCGGTGATTGATCCTTTTTGTGATTATGTCGTGGAGCAG
GAAGAGCTTCATCCGGAGCGCACGACCACTGTGGTGATGGCGCTAGTGATCACTCGCGATTGGCTGGATCAGACGCTTCT
CAATCAGCGGGCTGTCTATTTGTTTAAGGCCCTGTCTGGCGACTACAGCCGAGTCTTTTGCGTGGTGCGTTATTACCTAG
CGGGATAG

Upstream 100 bases:

>100_bases
AGTAGTGCAAGCTCTTCAGTTCTCGGTGTTACGTCATAGACCTGTGAAAGTGCCGTTTGCTTCCTTTTGTGCATCCTGAA
GAAAACGATTCCAAGACGAC

Downstream 100 bases:

>100_bases
TTGATCAGCGACGTCGTTTGGGTTGACAACCTTTCTCCACAAACTTTGGCCTTTCAGCTTGAGAGAGGGAGTACAGGGCT
TTTGGGAAAACATCATCGCA

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MSFFQKLLGHPLLRNKADDERLPNVQALPILSSDALSSVAYATEAALGVLILGGSGALGLSVPITLAIIALVAIVVLSYR
QAIEAYPKGGGSYVVARDNLGRNVGLIAAAALLIDYTLTAGVSLMAGTQALSSLVPSMLDHEVSLALLLLALIGWANLRG
LKETGRLFSLPTYAFVAMVALLILAGLKDLIFEHGFVPDMPPAVQAVQPLGWFLILRAFSSGCSAMTGIESIANGVKVFQ
EPAVVNARRTLLVMGVLLAAMFLAVSGLGYMYGIAPNDRVTVLAQIGSRAFGSGSVLLWALQLSTLLILVLAANTAFAGF
PRLAAMLAEDHCLPRQLSWIGDRLVYQNGIGVLLLVTALIIVICKGDTTVAVNLYALGVFTAFTLSQLGLVRRWWRLRGN
GWQGRLLMNALGAVTTFVVLVVIVVSKFQEGAWTVVITIPALVWGLAQIRRRYRKAYAALALEPDFGPLQVAPRQPPLGN
HCIVWIPGLWRASMEALRYGCSIADSVTAVFVLGDDDDPDAIRTAWDRLVGDHPGELELRLLESRFSSVIDPFCDYVVEQ
EELHPERTTTVVMALVITRDWLDQTLLNQRAVYLFKALSGDYSRVFCVVRYYLAG

Sequences:

>Translated_615_residues
MSFFQKLLGHPLLRNKADDERLPNVQALPILSSDALSSVAYATEAALGVLILGGSGALGLSVPITLAIIALVAIVVLSYR
QAIEAYPKGGGSYVVARDNLGRNVGLIAAAALLIDYTLTAGVSLMAGTQALSSLVPSMLDHEVSLALLLLALIGWANLRG
LKETGRLFSLPTYAFVAMVALLILAGLKDLIFEHGFVPDMPPAVQAVQPLGWFLILRAFSSGCSAMTGIESIANGVKVFQ
EPAVVNARRTLLVMGVLLAAMFLAVSGLGYMYGIAPNDRVTVLAQIGSRAFGSGSVLLWALQLSTLLILVLAANTAFAGF
PRLAAMLAEDHCLPRQLSWIGDRLVYQNGIGVLLLVTALIIVICKGDTTVAVNLYALGVFTAFTLSQLGLVRRWWRLRGN
GWQGRLLMNALGAVTTFVVLVVIVVSKFQEGAWTVVITIPALVWGLAQIRRRYRKAYAALALEPDFGPLQVAPRQPPLGN
HCIVWIPGLWRASMEALRYGCSIADSVTAVFVLGDDDDPDAIRTAWDRLVGDHPGELELRLLESRFSSVIDPFCDYVVEQ
EELHPERTTTVVMALVITRDWLDQTLLNQRAVYLFKALSGDYSRVFCVVRYYLAG
>Mature_614_residues
SFFQKLLGHPLLRNKADDERLPNVQALPILSSDALSSVAYATEAALGVLILGGSGALGLSVPITLAIIALVAIVVLSYRQ
AIEAYPKGGGSYVVARDNLGRNVGLIAAAALLIDYTLTAGVSLMAGTQALSSLVPSMLDHEVSLALLLLALIGWANLRGL
KETGRLFSLPTYAFVAMVALLILAGLKDLIFEHGFVPDMPPAVQAVQPLGWFLILRAFSSGCSAMTGIESIANGVKVFQE
PAVVNARRTLLVMGVLLAAMFLAVSGLGYMYGIAPNDRVTVLAQIGSRAFGSGSVLLWALQLSTLLILVLAANTAFAGFP
RLAAMLAEDHCLPRQLSWIGDRLVYQNGIGVLLLVTALIIVICKGDTTVAVNLYALGVFTAFTLSQLGLVRRWWRLRGNG
WQGRLLMNALGAVTTFVVLVVIVVSKFQEGAWTVVITIPALVWGLAQIRRRYRKAYAALALEPDFGPLQVAPRQPPLGNH
CIVWIPGLWRASMEALRYGCSIADSVTAVFVLGDDDDPDAIRTAWDRLVGDHPGELELRLLESRFSSVIDPFCDYVVEQE
ELHPERTTTVVMALVITRDWLDQTLLNQRAVYLFKALSGDYSRVFCVVRYYLAG

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66458; Mature: 66327

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFQKLLGHPLLRNKADDERLPNVQALPILSSDALSSVAYATEAALGVLILGGSGALGL
CCHHHHHHCCCHHCCCCCHHHCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCCC
SVPITLAIIALVAIVVLSYRQAIEAYPKGGGSYVVARDNLGRNVGLIAAAALLIDYTLTA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
GVSLMAGTQALSSLVPSMLDHEVSLALLLLALIGWANLRGLKETGRLFSLPTYAFVAMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEECCHHHHHHHHHH
LLILAGLKDLIFEHGFVPDMPPAVQAVQPLGWFLILRAFSSGCSAMTGIESIANGVKVFQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EPAVVNARRTLLVMGVLLAAMFLAVSGLGYMYGIAPNDRVTVLAQIGSRAFGSGSVLLWA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEHHCCCCCCCCCHHHHH
LQLSTLLILVLAANTAFAGFPRLAAMLAEDHCLPRQLSWIGDRLVYQNGIGVLLLVTALI
HHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVICKGDTTVAVNLYALGVFTAFTLSQLGLVRRWWRLRGNGWQGRLLMNALGAVTTFVVL
HEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VVIVVSKFQEGAWTVVITIPALVWGLAQIRRRYRKAYAALALEPDFGPLQVAPRQPPLGN
HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCC
HCIVWIPGLWRASMEALRYGCSIADSVTAVFVLGDDDDPDAIRTAWDRLVGDHPGELELR
EEEEEECCHHHHHHHHHHHCCCHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHH
LLESRFSSVIDPFCDYVVEQEELHPERTTTVVMALVITRDWLDQTLLNQRAVYLFKALSG
HHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DYSRVFCVVRYYLAG
CHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFFQKLLGHPLLRNKADDERLPNVQALPILSSDALSSVAYATEAALGVLILGGSGALGL
CHHHHHHCCCHHCCCCCHHHCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCCC
SVPITLAIIALVAIVVLSYRQAIEAYPKGGGSYVVARDNLGRNVGLIAAAALLIDYTLTA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
GVSLMAGTQALSSLVPSMLDHEVSLALLLLALIGWANLRGLKETGRLFSLPTYAFVAMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEECCHHHHHHHHHH
LLILAGLKDLIFEHGFVPDMPPAVQAVQPLGWFLILRAFSSGCSAMTGIESIANGVKVFQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EPAVVNARRTLLVMGVLLAAMFLAVSGLGYMYGIAPNDRVTVLAQIGSRAFGSGSVLLWA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEHHCCCCCCCCCHHHHH
LQLSTLLILVLAANTAFAGFPRLAAMLAEDHCLPRQLSWIGDRLVYQNGIGVLLLVTALI
HHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
IVICKGDTTVAVNLYALGVFTAFTLSQLGLVRRWWRLRGNGWQGRLLMNALGAVTTFVVL
HEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VVIVVSKFQEGAWTVVITIPALVWGLAQIRRRYRKAYAALALEPDFGPLQVAPRQPPLGN
HHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCC
HCIVWIPGLWRASMEALRYGCSIADSVTAVFVLGDDDDPDAIRTAWDRLVGDHPGELELR
EEEEEECCHHHHHHHHHHHCCCHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHH
LLESRFSSVIDPFCDYVVEQEELHPERTTTVVMALVITRDWLDQTLLNQRAVYLFKALSG
HHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DYSRVFCVVRYYLAG
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]