| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023768
Identifier: 124023768
GI number: 124023768
Start: 1824995
End: 1825873
Strand: Direct
Name: 124023768
Synonym: P9303_20741
Alternate gene names: NA
Gene position: 1824995-1825873 (Clockwise)
Preceding gene: 124023764
Following gene: 124023769
Centisome position: 68.03
GC content: 40.61
Gene sequence:
>879_bases ATGGAAAAAAAGTCAACCAAAACCTTAAAGCCTCTATCGAGCCAACTCCCTCGTGCTTCAGCAGGGCTGAATCTTTGCCA TGAGAACTGTGAAGAGATCTGGAAACAAAGGCCAAGTCTTGATTTTCTTCAAATCCATCCTGAGCACCTTATTCAGGAAA AAGGTGGAACCTATCGAGATCATCTAGACGAACTTCGTGATAGCTATCCGATTCTCCTGCATGGATTTGGGCTTTCCATA GGATCCTGCGCTCCTCTTGATCTGAAATACCTCAAATTAGTAAGGACAATACTAGATGAACATCCTGAAGCTTTTTTCTC AGACCACGTATCCTGGAGCTCACTTTCACATCATCATTTTCATGACCTGCTGCCTTTGATCCAAACTGAAGAGACACTTT CATACGTGGTGGAACGTGTTGAGAAATGTCAGGAGATAATTGGTCAGCCATTGGTTATTGAAAATATAAGCAGTTACATT AGATATCGACAATCCACAATGACTGAAAGTGAATTCATCAATGAATTATGCAATCGCAGCGGATGCTTTGTACTGCTTGA CATCAATAACCTCTGGGCAAATGCAATGAATTTTGGCGATGATCCATTGAAAATAATGCATGAGTACAATAAAGAAAATA TACGTTCCTATCATCTTGCTGGCTGCACGAAACAGAAAACCAAGACGGGTTATGCCCTTATTGATTATCATGGTGAAGCG GTTCATGAAAAAGTCTGGAGACTCTACAAAGAAGCACTTCGTCATTTTGGGCCATGGCCAACTCTGCTTGAATGGGAAAA TAATGTACCTCCTCTTAAAAGAACGTTAGAAGAGGTTCAAAAAATTAGCAAATGCCTAGATGAGGTCAAAGCAAGTTAA
Upstream 100 bases:
>100_bases ATTTAAAACATCAGGGACAATCATTGGCAATGCGGCTAAATTCAATATGTGTCAACCCAGTTAAACAACCAGTGACATCA CAACCAGACCTCAGTAATTC
Downstream 100 bases:
>100_bases TACTACCCCATCAGCTTTACAGAACCTCATCAGCATCATGAGTTATTCAAACAATTGCACTCATTGATTTTATTAGATCA AAACAAAACACATCGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MEKKSTKTLKPLSSQLPRASAGLNLCHENCEEIWKQRPSLDFLQIHPEHLIQEKGGTYRDHLDELRDSYPILLHGFGLSI GSCAPLDLKYLKLVRTILDEHPEAFFSDHVSWSSLSHHHFHDLLPLIQTEETLSYVVERVEKCQEIIGQPLVIENISSYI RYRQSTMTESEFINELCNRSGCFVLLDINNLWANAMNFGDDPLKIMHEYNKENIRSYHLAGCTKQKTKTGYALIDYHGEA VHEKVWRLYKEALRHFGPWPTLLEWENNVPPLKRTLEEVQKISKCLDEVKAS
Sequences:
>Translated_292_residues MEKKSTKTLKPLSSQLPRASAGLNLCHENCEEIWKQRPSLDFLQIHPEHLIQEKGGTYRDHLDELRDSYPILLHGFGLSI GSCAPLDLKYLKLVRTILDEHPEAFFSDHVSWSSLSHHHFHDLLPLIQTEETLSYVVERVEKCQEIIGQPLVIENISSYI RYRQSTMTESEFINELCNRSGCFVLLDINNLWANAMNFGDDPLKIMHEYNKENIRSYHLAGCTKQKTKTGYALIDYHGEA VHEKVWRLYKEALRHFGPWPTLLEWENNVPPLKRTLEEVQKISKCLDEVKAS >Mature_292_residues MEKKSTKTLKPLSSQLPRASAGLNLCHENCEEIWKQRPSLDFLQIHPEHLIQEKGGTYRDHLDELRDSYPILLHGFGLSI GSCAPLDLKYLKLVRTILDEHPEAFFSDHVSWSSLSHHHFHDLLPLIQTEETLSYVVERVEKCQEIIGQPLVIENISSYI RYRQSTMTESEFINELCNRSGCFVLLDINNLWANAMNFGDDPLKIMHEYNKENIRSYHLAGCTKQKTKTGYALIDYHGEA VHEKVWRLYKEALRHFGPWPTLLEWENNVPPLKRTLEEVQKISKCLDEVKAS
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 33909; Mature: 33909
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKSTKTLKPLSSQLPRASAGLNLCHENCEEIWKQRPSLDFLQIHPEHLIQEKGGTYRD CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCHHH HLDELRDSYPILLHGFGLSIGSCAPLDLKYLKLVRTILDEHPEAFFSDHVSWSSLSHHHF HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCHHHH HDLLPLIQTEETLSYVVERVEKCQEIIGQPLVIENISSYIRYRQSTMTESEFINELCNRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC GCFVLLDINNLWANAMNFGDDPLKIMHEYNKENIRSYHLAGCTKQKTKTGYALIDYHGEA CCEEEEECHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHCCCCEEEEECCCHH VHEKVWRLYKEALRHFGPWPTLLEWENNVPPLKRTLEEVQKISKCLDEVKAS HHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKKSTKTLKPLSSQLPRASAGLNLCHENCEEIWKQRPSLDFLQIHPEHLIQEKGGTYRD CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCHHH HLDELRDSYPILLHGFGLSIGSCAPLDLKYLKLVRTILDEHPEAFFSDHVSWSSLSHHHF HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCHHHH HDLLPLIQTEETLSYVVERVEKCQEIIGQPLVIENISSYIRYRQSTMTESEFINELCNRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC GCFVLLDINNLWANAMNFGDDPLKIMHEYNKENIRSYHLAGCTKQKTKTGYALIDYHGEA CCEEEEECHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHCCCCEEEEECCCHH VHEKVWRLYKEALRHFGPWPTLLEWENNVPPLKRTLEEVQKISKCLDEVKAS HHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA