Click here to switch to the map view.

The map label for this gene is dppC [H]

Identifier: 124023766

GI number: 124023766

Start: 1823459

End: 1824328

Strand: Reverse

Name: dppC [H]

Synonym: P9303_20721

Alternate gene names: 124023766

Gene position: 1824328-1823459 (Counterclockwise)

Preceding gene: 124023767

Following gene: 124023765

Centisome position: 68.0

GC content: 55.29

Gene sequence:

>870_bases
GTGAGCTTTGACCTTTCGTCTTTGCGTCTGTCACGAGTGACCTTGTCTACTCGCATGGCGCGCTGGGGGATGGTGATTGT
TGCCATCTATTTGTTGGTGGCCTTAATCACCCCCTTGTTGGTGATGGTGGGTGTTTTGCCTGAGGCCAACGCTGGTCTTG
ATAATCCCATTTATGCGCCTCCTTCATGGGGGCATTGGTGCGGAACTGATCGTCTCGGACGTGACGTATGTGTTCGCACC
ATGGAGGGCAGTGGCGTGGCTTTGCAGGTGGTTCTTCTTGCGGTGACCTTGGCTGTGTTGGTGGGGGTGCCCCTAGGGAT
GATGAGTGGCTACCTCGGGGGTGCTTTTGATCGCATGTTGGTGTTGGTGATGGACACCCTCTACACCTTGCCGGTGCTCT
TGCTTTCTGTGGTCTTGGCTTTTTTGCTTGGACGGGGTATTCCCAATGCGGCCGCAGCTCTTTGTGTTGTTTATGTGCCC
CAGTACTTCCGGGTGGTTCGTAACCAAACAGCCCAGGTAAAAGCAGAACTGTTTGTAGAGGCTGCCCGTTCCCTCGGTGC
TGGCCCCATTTGGATCTTGCGCAAATACCTGCTTCGCAATGTGATCACATCCGTGCCAGTCCTGCTGACCATGAATGCTG
CTGATGCGGTTTTGGTGCTTGGTGGCCTTGGTTTTCTCGGCCTGGGACTGCCGGAAACCGTGCCTGAATGGGGGAGTGAT
CTGAATATGGCTCTGGCAGCAGTGCCAACTGGGATTTGGTGGACTGCTCTCTATCCAGGCCTGGCCATGTTCGTATTGGT
GCTGGGACTCTCATTCCTTGGTGAGGGGTTGGAGGCATGGGTGAGTGGTCTCGATGAGTCGACTGCCTGA

Upstream 100 bases:

>100_bases
GAGAATGCTGCTGCTGGTGGAGCGATCTTTGTGATTGAGTTGCAACGTTGTCAGCCGCCTTAGCAACAATGCAGAGACTG
TTCTGTCTCCTTCCTCAGCA

Downstream 100 bases:

>100_bases
TGACAGATCACTCCCATTGCATCCTTTGGAGGGTCACACTGGGGGAAGTCTTTGCTTCAAGCCATGCCCTGGTGGATCAC
ATTGATCTTGCTGGCGCTGA

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSFDLSSLRLSRVTLSTRMARWGMVIVAIYLLVALITPLLVMVGVLPEANAGLDNPIYAPPSWGHWCGTDRLGRDVCVRT
MEGSGVALQVVLLAVTLAVLVGVPLGMMSGYLGGAFDRMLVLVMDTLYTLPVLLLSVVLAFLLGRGIPNAAAALCVVYVP
QYFRVVRNQTAQVKAELFVEAARSLGAGPIWILRKYLLRNVITSVPVLLTMNAADAVLVLGGLGFLGLGLPETVPEWGSD
LNMALAAVPTGIWWTALYPGLAMFVLVLGLSFLGEGLEAWVSGLDESTA

Sequences:

>Translated_289_residues
MSFDLSSLRLSRVTLSTRMARWGMVIVAIYLLVALITPLLVMVGVLPEANAGLDNPIYAPPSWGHWCGTDRLGRDVCVRT
MEGSGVALQVVLLAVTLAVLVGVPLGMMSGYLGGAFDRMLVLVMDTLYTLPVLLLSVVLAFLLGRGIPNAAAALCVVYVP
QYFRVVRNQTAQVKAELFVEAARSLGAGPIWILRKYLLRNVITSVPVLLTMNAADAVLVLGGLGFLGLGLPETVPEWGSD
LNMALAAVPTGIWWTALYPGLAMFVLVLGLSFLGEGLEAWVSGLDESTA
>Mature_288_residues
SFDLSSLRLSRVTLSTRMARWGMVIVAIYLLVALITPLLVMVGVLPEANAGLDNPIYAPPSWGHWCGTDRLGRDVCVRTM
EGSGVALQVVLLAVTLAVLVGVPLGMMSGYLGGAFDRMLVLVMDTLYTLPVLLLSVVLAFLLGRGIPNAAAALCVVYVPQ
YFRVVRNQTAQVKAELFVEAARSLGAGPIWILRKYLLRNVITSVPVLLTMNAADAVLVLGGLGFLGLGLPETVPEWGSDL
NMALAAVPTGIWWTALYPGLAMFVLVLGLSFLGEGLEAWVSGLDESTA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=268, Percent_Identity=33.5820895522388, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=32.2834645669291, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789964, Length=226, Percent_Identity=36.7256637168142, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789889, Length=222, Percent_Identity=32.8828828828829, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787549, Length=225, Percent_Identity=30.2222222222222, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787498, Length=218, Percent_Identity=32.1100917431193, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788505, Length=193, Percent_Identity=26.4248704663212, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30813; Mature: 30682

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDLSSLRLSRVTLSTRMARWGMVIVAIYLLVALITPLLVMVGVLPEANAGLDNPIYAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSWGHWCGTDRLGRDVCVRTMEGSGVALQVVLLAVTLAVLVGVPLGMMSGYLGGAFDRML
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VLVMDTLYTLPVLLLSVVLAFLLGRGIPNAAAALCVVYVPQYFRVVRNQTAQVKAELFVE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARSLGAGPIWILRKYLLRNVITSVPVLLTMNAADAVLVLGGLGFLGLGLPETVPEWGSD
HHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCC
LNMALAAVPTGIWWTALYPGLAMFVLVLGLSFLGEGLEAWVSGLDESTA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SFDLSSLRLSRVTLSTRMARWGMVIVAIYLLVALITPLLVMVGVLPEANAGLDNPIYAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSWGHWCGTDRLGRDVCVRTMEGSGVALQVVLLAVTLAVLVGVPLGMMSGYLGGAFDRML
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VLVMDTLYTLPVLLLSVVLAFLLGRGIPNAAAALCVVYVPQYFRVVRNQTAQVKAELFVE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARSLGAGPIWILRKYLLRNVITSVPVLLTMNAADAVLVLGGLGFLGLGLPETVPEWGSD
HHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCC
LNMALAAVPTGIWWTALYPGLAMFVLVLGLSFLGEGLEAWVSGLDESTA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]