| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023709
Identifier: 124023709
GI number: 124023709
Start: 1766973
End: 1768205
Strand: Reverse
Name: 124023709
Synonym: P9303_20091
Alternate gene names: NA
Gene position: 1768205-1766973 (Counterclockwise)
Preceding gene: 124023712
Following gene: 124023708
Centisome position: 65.91
GC content: 56.29
Gene sequence:
>1233_bases ATGGCTGGCAAGGCCCCAGAAGACTTGCCCAAACGGATTGCTTTGGTGCATGAGTGGTTCACGCCCCGTGCCGTGGGGGG TGCTGAGCAGGTTGTGCAATCTATCGATGCTCTGTTGCTCAGATTGGGCTGTCAACCAGACTTGGCAGCTCTGGTTGATG GAGAAAGCCTTAGGCCAGGAAGCTGGCTGGAAGGTCGCGCCATTCAGACCAGTCCGATTCAACATCTCCCCTGGGGAGTG AGCCATGTGCAGCAATACCTGCCCTTATTGCCCCTTGCGATTGAGCAGTTAGATGTGGGTGATTACCCCTTGGTCATCAG CAGTAGCCATCTTGTGGCCAAGGGGGTACTCACCTCTCCTGAGCAGCTCCATGTGAGCTACGTGCACACTCCCGTTCGTT ATGCATGGGATCAGATGCATGCCTATTTGCGTCGCTCGGCCTTGGCACAAAGCGGTTTAGGGCCGTTGATCCGTTGGCAA TTGCATGTTCTCAGGCAGTGGGATCAGCTCAGTGGTGCGCGCGTGAATCATCTATTGGCCAATTCCCGCTTTACAGCGCG ACGTATTGCTTGCTTCTGGGGGCGTGAAGCGGAGGTAGTGCATCCACCGGTGAAGGTGGATCGCTTCCGTTGGGATCAGC CTCGCAATGATGTGTACCTCTGTGTTTGTCGCCTCGTCCCTTACAAGCGAGTGGATCTTGTGATTGAGGCCTTCAATCGA TTGCGCTTGCCACTGTTGGTGGTTGGCGATGGACCGGAGCGGACATTCCTAGAAGAGTTGGCAGGTCCCACAGTGCAGTT GCTAGGTCGTCAAACCCAGGCGCAGGTTGAGGCCTTGATGGCAAGTTGCCGAGCCTTCGTTTATGCCGCTTTGGAGGACT TTGGAATTGCACCAGTGGAAGCCATGGCAGCGGGTGCTCCAGTAATTGGCTTGGGGAGGGGTGGCTTACTCGATACCGTG CGTTGTGCAGCGGCGGGAAGGCCTTACCCAACAGGGGTCTTGTTCCCTGAACAGACAGTCGCATCAGTCGCGCAGGCGGT TGCCTGGTTTGAGGAACGTCAGCTTTGGCAGCAGTTGACCCCTGAAGTCGTACGCCTTTGCGCAGAACAATTCCGTCCGG AAGCTTTTGCGTCGCGTTTTGAGACTGCACTGCGTCAGGTCTGGCAACAACATCAGCAGGCCTGTGCCGTTGCTGCGAGT GACCCTGTGGAGCTTTTAGAGTTTCGATCCTGA
Upstream 100 bases:
>100_bases TGATCGGCATGCTTCAAGTGGGCTTAACCCAGCTTCGGAACGCAGCACTCTTGCTGCAATCGGCTGAGAGACTTCGTGAT GAACTGAGGATCAATCCGCT
Downstream 100 bases:
>100_bases TCTTGAGTAGGCGAGCCGCTTGGAGAGATCATGAGATTGGCCTCCAGGCGGTTTGTGTTTCATGGGGGTAGTAGAGCCCT GCGCCGAGGGGCTTCTCGTC
Product: glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQPDLAALVDGESLRPGSWLEGRAIQTSPIQHLPWGV SHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSPEQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQ LHVLRQWDQLSGARVNHLLANSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNR LRLPLLVVGDGPERTFLEELAGPTVQLLGRQTQAQVEALMASCRAFVYAALEDFGIAPVEAMAAGAPVIGLGRGGLLDTV RCAAAGRPYPTGVLFPEQTVASVAQAVAWFEERQLWQQLTPEVVRLCAEQFRPEAFASRFETALRQVWQQHQQACAVAAS DPVELLEFRS
Sequences:
>Translated_410_residues MAGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQPDLAALVDGESLRPGSWLEGRAIQTSPIQHLPWGV SHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSPEQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQ LHVLRQWDQLSGARVNHLLANSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNR LRLPLLVVGDGPERTFLEELAGPTVQLLGRQTQAQVEALMASCRAFVYAALEDFGIAPVEAMAAGAPVIGLGRGGLLDTV RCAAAGRPYPTGVLFPEQTVASVAQAVAWFEERQLWQQLTPEVVRLCAEQFRPEAFASRFETALRQVWQQHQQACAVAAS DPVELLEFRS >Mature_409_residues AGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQPDLAALVDGESLRPGSWLEGRAIQTSPIQHLPWGVS HVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSPEQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQL HVLRQWDQLSGARVNHLLANSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNRL RLPLLVVGDGPERTFLEELAGPTVQLLGRQTQAQVEALMASCRAFVYAALEDFGIAPVEAMAAGAPVIGLGRGGLLDTVR CAAAGRPYPTGVLFPEQTVASVAQAVAWFEERQLWQQLTPEVVRLCAEQFRPEAFASRFETALRQVWQQHQQACAVAASD PVELLEFRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45651; Mature: 45520
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQPDLAALVDGESLRPG CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC SWLEGRAIQTSPIQHLPWGVSHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCCCH EQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQLHVLRQWDQLSGARVNHLLA HHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH NSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNR CCCHHHHHHHHHCCCCCCEECCCCHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHH LRLPLLVVGDGPERTFLEELAGPTVQLLGRQTQAQVEALMASCRAFVYAALEDFGIAPVE CCCCEEEECCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AMAAGAPVIGLGRGGLLDTVRCAAAGRPYPTGVLFPEQTVASVAQAVAWFEERQLWQQLT HHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PEVVRLCAEQFRPEAFASRFETALRQVWQQHQQACAVAASDPVELLEFRS HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure AGKAPEDLPKRIALVHEWFTPRAVGGAEQVVQSIDALLLRLGCQPDLAALVDGESLRPG CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC SWLEGRAIQTSPIQHLPWGVSHVQQYLPLLPLAIEQLDVGDYPLVISSSHLVAKGVLTSP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCCCH EQLHVSYVHTPVRYAWDQMHAYLRRSALAQSGLGPLIRWQLHVLRQWDQLSGARVNHLLA HHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH NSRFTARRIACFWGREAEVVHPPVKVDRFRWDQPRNDVYLCVCRLVPYKRVDLVIEAFNR CCCHHHHHHHHHCCCCCCEECCCCHHCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHH LRLPLLVVGDGPERTFLEELAGPTVQLLGRQTQAQVEALMASCRAFVYAALEDFGIAPVE CCCCEEEECCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AMAAGAPVIGLGRGGLLDTVRCAAAGRPYPTGVLFPEQTVASVAQAVAWFEERQLWQQLT HHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PEVVRLCAEQFRPEAFASRFETALRQVWQQHQQACAVAASDPVELLEFRS HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA