| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023675
Identifier: 124023675
GI number: 124023675
Start: 1736839
End: 1737675
Strand: Reverse
Name: 124023675
Synonym: P9303_19751
Alternate gene names: NA
Gene position: 1737675-1736839 (Counterclockwise)
Preceding gene: 124023676
Following gene: 124023671
Centisome position: 64.77
GC content: 54.84
Gene sequence:
>837_bases GTGTTGACTTCCTTGCTTCTCTGTGCGCCGAACAGTTCAAGGCCCATGCATGAGCAGAGCTTGACCACAATGCCTATAGG CCTGATCTGTTCAGCAGTGGCATCAGCGCAATTCCACCCTCAATCCGTCAGACTTCCTCTTGACTGTTTCGATTTCATGC TGATCAGCATCCTCACGGGCTTCGCTGCTGGAGCCCTTCATGTGGTGGGTGGTGCTGATCATCTTGTTGCCATCGCACCG AGCGCATTGCGTAAGCCAGCTACGGCATTACGCAATGGCCTTGCGTGGGGGATTGGTCATTCAACAGGTGTTCTGGTTCT TTCAACCATTGCCATTGTTTTGAAAGACCTTGTCCATATCGAGCGCATGTCCTCCTGGGCCGAATTCTGCGTGGGAGTGG CGTTGCTTGTGGTTGGAGCGATGGCGATTCGTACTGCTCTTGGCCTGGATATCCACACCCATCAGCACACGCATCAGCAA AACTATGGTCACGCCCATGACCATCAACATGTGCACCTGCATCTGCGTGGGCGACACAAGCACGGGCGACATGCTTATGC AGCGAGCAGTCTTGGCCTCCTTCATGGCTTGGCTGGGGCCAGCCATCTACTTGCAGTCATTCCCGCGCTGGCCTTGCCTC CTCTCTGGGCTTTGATCTATATGGCGGCTTATCTGTTGGGTTCCATCGCAGCGATGGTCGCTGTTGTTGGGGCGATTTCC TTAGCCACATTGCGTGTGGGGCGTCGTGCCTTGCCCTTGCTGGTGGGATCAACCGGTGGGCTATCGATCATCACGGGCTT CTTTTGGTTGCAGAAAACATCCCCTCAGCTTCTTTGA
Upstream 100 bases:
>100_bases GTGCGCTTGCTTGCAGACGACGACTTCGCTACTCAGATGAGATCTCTGATTAACGAGCGTTCGCAGCGCTTATTTGCTGA TCAAGAGGCAATCGACTGTT
Downstream 100 bases:
>100_bases TTGCCTAATCTGCTGGGCTCTTATGCGCTGAAGGGAACACGCCATACGCATTCAGCGATGCCAATCAGGCTGTCGCGATT CACCAAACCGAAATGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLTSLLLCAPNSSRPMHEQSLTTMPIGLICSAVASAQFHPQSVRLPLDCFDFMLISILTGFAAGALHVVGGADHLVAIAP SALRKPATALRNGLAWGIGHSTGVLVLSTIAIVLKDLVHIERMSSWAEFCVGVALLVVGAMAIRTALGLDIHTHQHTHQQ NYGHAHDHQHVHLHLRGRHKHGRHAYAASSLGLLHGLAGASHLLAVIPALALPPLWALIYMAAYLLGSIAAMVAVVGAIS LATLRVGRRALPLLVGSTGGLSIITGFFWLQKTSPQLL
Sequences:
>Translated_278_residues MLTSLLLCAPNSSRPMHEQSLTTMPIGLICSAVASAQFHPQSVRLPLDCFDFMLISILTGFAAGALHVVGGADHLVAIAP SALRKPATALRNGLAWGIGHSTGVLVLSTIAIVLKDLVHIERMSSWAEFCVGVALLVVGAMAIRTALGLDIHTHQHTHQQ NYGHAHDHQHVHLHLRGRHKHGRHAYAASSLGLLHGLAGASHLLAVIPALALPPLWALIYMAAYLLGSIAAMVAVVGAIS LATLRVGRRALPLLVGSTGGLSIITGFFWLQKTSPQLL >Mature_278_residues MLTSLLLCAPNSSRPMHEQSLTTMPIGLICSAVASAQFHPQSVRLPLDCFDFMLISILTGFAAGALHVVGGADHLVAIAP SALRKPATALRNGLAWGIGHSTGVLVLSTIAIVLKDLVHIERMSSWAEFCVGVALLVVGAMAIRTALGLDIHTHQHTHQQ NYGHAHDHQHVHLHLRGRHKHGRHAYAASSLGLLHGLAGASHLLAVIPALALPPLWALIYMAAYLLGSIAAMVAVVGAIS LATLRVGRRALPLLVGSTGGLSIITGFFWLQKTSPQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29397; Mature: 29397
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSLLLCAPNSSRPMHEQSLTTMPIGLICSAVASAQFHPQSVRLPLDCFDFMLISILTG CCCCEEEECCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FAAGALHVVGGADHLVAIAPSALRKPATALRNGLAWGIGHSTGVLVLSTIAIVLKDLVHI HHHHHHHEECCCCHHEEECCHHHHCHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHH ERMSSWAEFCVGVALLVVGAMAIRTALGLDIHTHQHTHQQNYGHAHDHQHVHLHLRGRHK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCC HGRHAYAASSLGLLHGLAGASHLLAVIPALALPPLWALIYMAAYLLGSIAAMVAVVGAIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATLRVGRRALPLLVGSTGGLSIITGFFWLQKTSPQLL HHHHHHCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLTSLLLCAPNSSRPMHEQSLTTMPIGLICSAVASAQFHPQSVRLPLDCFDFMLISILTG CCCCEEEECCCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FAAGALHVVGGADHLVAIAPSALRKPATALRNGLAWGIGHSTGVLVLSTIAIVLKDLVHI HHHHHHHEECCCCHHEEECCHHHHCHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHH ERMSSWAEFCVGVALLVVGAMAIRTALGLDIHTHQHTHQQNYGHAHDHQHVHLHLRGRHK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCC HGRHAYAASSLGLLHGLAGASHLLAVIPALALPPLWALIYMAAYLLGSIAAMVAVVGAIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATLRVGRRALPLLVGSTGGLSIITGFFWLQKTSPQLL HHHHHHCCHHHHEEEECCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA