| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023653
Identifier: 124023653
GI number: 124023653
Start: 1717800
End: 1718540
Strand: Reverse
Name: 124023653
Synonym: P9303_19531
Alternate gene names: NA
Gene position: 1718540-1717800 (Counterclockwise)
Preceding gene: 124023654
Following gene: 124023652
Centisome position: 64.06
GC content: 54.66
Gene sequence:
>741_bases ATGCCGGCAAGCAGCAATTTCCAGGAGGCCATTCGCGAGGCGCAATCCAGCGCCTTGGTTGGCCCCAATGTCGTTAACAA GGCCCTGCCCTATGTGGGCGGTGGCATGGTGCTCACCGCCGGTGGCGTGTTGGGAGGGATCGCCACTGTTCAATCCATGG GTTGGCAAGCTTTTCAACCCTTGTCGCTGATTGCGATCATCCCCTGGTTCATCCTTTTCTTTGTTGCCCAGAATGCAGCA AAAAAAGGCAATAACGCCACCGCTCTTCCCCTACTGGCCACCTTCAGCCTGTTGACGGGTTTCACCCTCACTGGTTTGGT TCTTCAGGCTGTTGCCGTTGCTGGTGCGGCCTCTATCGGTATCGCTGCTTTGGCGACTGGTCTCACCTTTGGGATTGCCT CGGTTGTTGGTAGGCGCATGAGCGACAGCGTCGGTCAGGCCCTCTCTGGTGTGGTTGGTCTTGGTCTGATCGGCCTGATC ATCGCCATGGTTGTGCAACTGATTGGCAGCATTTTTGCTCCGCAGGTTTTCGCGATCGGCACCTTCGAATTGATGATCGC CGGCTTTGGCACGGTGCTCTTTGTAGGCATGGCTTTCGTGGACTTCTACACGATGCCTCGCACCTACACGGATGATCAGT ACCTTTCAGGTGCTTTAGGGATGTATCTCACCTACATCAACCTGTTCATCTTTATTTTGCGTCTAATCATTGCCATTCAA GGTGGCGGTCGACGTAACTGA
Upstream 100 bases:
>100_bases TATGCGCGCCGAGATCAACGATAGGGAGACCCGCACTCAAAAAATCAGCAAAACCCCTTTTTTACTGGCAAAGTAACGGT GTTAAATGATCTGGTGAGCC
Downstream 100 bases:
>100_bases ACTCAGCAAGAACACTGCTTCAGCCCCGCCTAAGCGGGGCTTTTTTTGTTGCTTGATTCAGTTGAGATCTGTTGCGGCAC TGGTTGCAGGCTCTTAAATC
Product: integral membrane protein, interacts with FtsH
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPASSNFQEAIREAQSSALVGPNVVNKALPYVGGGMVLTAGGVLGGIATVQSMGWQAFQPLSLIAIIPWFILFFVAQNAA KKGNNATALPLLATFSLLTGFTLTGLVLQAVAVAGAASIGIAALATGLTFGIASVVGRRMSDSVGQALSGVVGLGLIGLI IAMVVQLIGSIFAPQVFAIGTFELMIAGFGTVLFVGMAFVDFYTMPRTYTDDQYLSGALGMYLTYINLFIFILRLIIAIQ GGGRRN
Sequences:
>Translated_246_residues MPASSNFQEAIREAQSSALVGPNVVNKALPYVGGGMVLTAGGVLGGIATVQSMGWQAFQPLSLIAIIPWFILFFVAQNAA KKGNNATALPLLATFSLLTGFTLTGLVLQAVAVAGAASIGIAALATGLTFGIASVVGRRMSDSVGQALSGVVGLGLIGLI IAMVVQLIGSIFAPQVFAIGTFELMIAGFGTVLFVGMAFVDFYTMPRTYTDDQYLSGALGMYLTYINLFIFILRLIIAIQ GGGRRN >Mature_245_residues PASSNFQEAIREAQSSALVGPNVVNKALPYVGGGMVLTAGGVLGGIATVQSMGWQAFQPLSLIAIIPWFILFFVAQNAAK KGNNATALPLLATFSLLTGFTLTGLVLQAVAVAGAASIGIAALATGLTFGIASVVGRRMSDSVGQALSGVVGLGLIGLII AMVVQLIGSIFAPQVFAIGTFELMIAGFGTVLFVGMAFVDFYTMPRTYTDDQYLSGALGMYLTYINLFIFILRLIIAIQG GGRRN
Specific function: Unknown
COG id: COG0670
COG function: function code R; Integral membrane protein, interacts with FtsH
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25507; Mature: 25375
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSNFQEAIREAQSSALVGPNVVNKALPYVGGGMVLTAGGVLGGIATVQSMGWQAFQP CCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHEECCHHHHHHHHHHHCCHHHHHH LSLIAIIPWFILFFVAQNAAKKGNNATALPLLATFSLLTGFTLTGLVLQAVAVAGAASIG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAALATGLTFGIASVVGRRMSDSVGQALSGVVGLGLIGLIIAMVVQLIGSIFAPQVFAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TFELMIAGFGTVLFVGMAFVDFYTMPRTYTDDQYLSGALGMYLTYINLFIFILRLIIAIQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGGRRN CCCCCC >Mature Secondary Structure PASSNFQEAIREAQSSALVGPNVVNKALPYVGGGMVLTAGGVLGGIATVQSMGWQAFQP CCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHEECCHHHHHHHHHHHCCHHHHHH LSLIAIIPWFILFFVAQNAAKKGNNATALPLLATFSLLTGFTLTGLVLQAVAVAGAASIG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAALATGLTFGIASVVGRRMSDSVGQALSGVVGLGLIGLIIAMVVQLIGSIFAPQVFAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TFELMIAGFGTVLFVGMAFVDFYTMPRTYTDDQYLSGALGMYLTYINLFIFILRLIIAIQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGGRRN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA