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The map label for this gene is oprB [H]

Identifier: 124023651

GI number: 124023651

Start: 1714827

End: 1716185

Strand: Reverse

Name: oprB [H]

Synonym: P9303_19511

Alternate gene names: 124023651

Gene position: 1716185-1714827 (Counterclockwise)

Preceding gene: 124023652

Following gene: 124023650

Centisome position: 63.97

GC content: 55.78

Gene sequence:

>1359_bases
GTGATGCGTTCTTTTTGCTTTGGACTCCTAAGGGCTATGGCCTGCCTGAGCCTGGTGGCATCGTCATTGAATGCTGTTCG
TGCTGAACCGCGCGAAGACCGCAGCGAGCTATCCCCTGATGTCGAACGGCTCGAAGTGATTGCGCAGCCCTGGTTGCATG
ACTGGCTCTGGCTTCCAGAGTGGATCCGCCTGTCGTTCAACTACACCAACGAGATTGACGCCAACCCGAGTGGAGGCAAT
CAGCAGACAGGAACCTATACCCACAACGTTGCCATTAATTCGGCCTTCTCAAGTGGCTTCGGCAAAGAGGCGAGCGAATG
GCAGGAGATCGACCACTGGACGTTGAATATCACGGCGTCCCAGCGATCAGGCACCAGCCTCTCGCAGAAGATTCCCAATG
AGCTCGCCGTTCAGCAGATCTACGGTTATGGGCAGACGTTCCGGTTGGCGGGACTCTGGCTGGAGCGCAATCAAGCTGAG
GATGGCCTGCTGAAGATGAAGTTCGGTAAATTCGCCACCTTCGATGACTTCGCCTCATCGCCACTTTATTGCTTTTACAC
CAACAACGGTTTTTGCGGGCAGAACTGGGGGATTCCCAATTCCCTGCCGGTGATGGCCTATCCGGCGAACCAATATGGGT
TCGTGTTTTATCTCGGTGAGGAGGACGGACCTCATGTCCGTTCAGGGACCTACCAAATCAACCCCGATGGGGCGGAACCG
GCCTTTCATGGCGCTGATTTTCAGATACGCGATAGCGATGGTCTGGCCCAGTTCGTGCAGTTCAATGTGCCATTAGGTTC
CGGGAAGCCTCAGGCGGCCAGACGTCTCGAGGATGGTTCCGTGGTGCTCGTTCCAGAGGATGAGCTGGAGGTTTACTACG
TGTCAGGTCTTCCCCAACCGGGGTTGCAGCTGGGTGGATGGATTGGCAACTGGCAGTTCCCACTGGTGAATGGCAATGGC
AAGACCTCTGAGAGCAACGAAGGTGTCTATGGCCTCGTCTCAGTGCCTTGGGACTTCGGGGGGCTGGTGCTCGATGGCCG
GTTGTGGGCCAATGCAACTTATGGTTTGACTCAGAGCGTCCAGGATGTTCCCAACACTTATGCCGGGGGCTGGGTCGGCA
AGGGTTTGTTCCGCAATCGCCCTCACGATGCCGTTGTGATCGGACTGGCCAATGTCAACTGGAGCCGAGACATCCCTGAC
GGACCGATTTGGGAATCAGTCCTTGAATTGGGTTATCAGTTCATGCTCGGCAGCAATGTTTCGATTCAGCCGGGGGTTCA
ATACATCTTCAATCCGATGGGCAAGGGCGATGTGGATGATCCTTTGCTGCTCGGTCTGCAGATGAGCTTCTCCTTCTGA

Upstream 100 bases:

>100_bases
GGGAGACCAAAGGCATGGAGCTCGAGGAGATGGCCTGATGCTCTGATCAGCAAGGCTCTTCCCAAGGGTGTATTCGCCTC
AAGCCTATTTCTCCCTGTTC

Downstream 100 bases:

>100_bases
TTGGTGAATTGGCCATCGGCGATGGCGGCTTCAACACGTCAGCATCGCCTTAATTTGCGCCAGATCAAACGGGACGACCA
TTTCTATACCGATCAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MMRSFCFGLLRAMACLSLVASSLNAVRAEPREDRSELSPDVERLEVIAQPWLHDWLWLPEWIRLSFNYTNEIDANPSGGN
QQTGTYTHNVAINSAFSSGFGKEASEWQEIDHWTLNITASQRSGTSLSQKIPNELAVQQIYGYGQTFRLAGLWLERNQAE
DGLLKMKFGKFATFDDFASSPLYCFYTNNGFCGQNWGIPNSLPVMAYPANQYGFVFYLGEEDGPHVRSGTYQINPDGAEP
AFHGADFQIRDSDGLAQFVQFNVPLGSGKPQAARRLEDGSVVLVPEDELEVYYVSGLPQPGLQLGGWIGNWQFPLVNGNG
KTSESNEGVYGLVSVPWDFGGLVLDGRLWANATYGLTQSVQDVPNTYAGGWVGKGLFRNRPHDAVVIGLANVNWSRDIPD
GPIWESVLELGYQFMLGSNVSIQPGVQYIFNPMGKGDVDDPLLLGLQMSFSF

Sequences:

>Translated_452_residues
MMRSFCFGLLRAMACLSLVASSLNAVRAEPREDRSELSPDVERLEVIAQPWLHDWLWLPEWIRLSFNYTNEIDANPSGGN
QQTGTYTHNVAINSAFSSGFGKEASEWQEIDHWTLNITASQRSGTSLSQKIPNELAVQQIYGYGQTFRLAGLWLERNQAE
DGLLKMKFGKFATFDDFASSPLYCFYTNNGFCGQNWGIPNSLPVMAYPANQYGFVFYLGEEDGPHVRSGTYQINPDGAEP
AFHGADFQIRDSDGLAQFVQFNVPLGSGKPQAARRLEDGSVVLVPEDELEVYYVSGLPQPGLQLGGWIGNWQFPLVNGNG
KTSESNEGVYGLVSVPWDFGGLVLDGRLWANATYGLTQSVQDVPNTYAGGWVGKGLFRNRPHDAVVIGLANVNWSRDIPD
GPIWESVLELGYQFMLGSNVSIQPGVQYIFNPMGKGDVDDPLLLGLQMSFSF
>Mature_452_residues
MMRSFCFGLLRAMACLSLVASSLNAVRAEPREDRSELSPDVERLEVIAQPWLHDWLWLPEWIRLSFNYTNEIDANPSGGN
QQTGTYTHNVAINSAFSSGFGKEASEWQEIDHWTLNITASQRSGTSLSQKIPNELAVQQIYGYGQTFRLAGLWLERNQAE
DGLLKMKFGKFATFDDFASSPLYCFYTNNGFCGQNWGIPNSLPVMAYPANQYGFVFYLGEEDGPHVRSGTYQINPDGAEP
AFHGADFQIRDSDGLAQFVQFNVPLGSGKPQAARRLEDGSVVLVPEDELEVYYVSGLPQPGLQLGGWIGNWQFPLVNGNG
KTSESNEGVYGLVSVPWDFGGLVLDGRLWANATYGLTQSVQDVPNTYAGGWVGKGLFRNRPHDAVVIGLANVNWSRDIPD
GPIWESVLELGYQFMLGSNVSIQPGVQYIFNPMGKGDVDDPLLLGLQMSFSF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 50004; Mature: 50004

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSFCFGLLRAMACLSLVASSLNAVRAEPREDRSELSPDVERLEVIAQPWLHDWLWLPE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCC
WIRLSFNYTNEIDANPSGGNQQTGTYTHNVAINSAFSSGFGKEASEWQEIDHWTLNITAS
EEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCCHHHHHCCCEEEEEEEC
QRSGTSLSQKIPNELAVQQIYGYGQTFRLAGLWLERNQAEDGLLKMKFGKFATFDDFASS
CCCCCCHHHHCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHCCC
PLYCFYTNNGFCGQNWGIPNSLPVMAYPANQYGFVFYLGEEDGPHVRSGTYQINPDGAEP
CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEECCEEEECCCCCCC
AFHGADFQIRDSDGLAQFVQFNVPLGSGKPQAARRLEDGSVVLVPEDELEVYYVSGLPQP
CCCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCC
GLQLGGWIGNWQFPLVNGNGKTSESNEGVYGLVSVPWDFGGLVLDGRLWANATYGLTQSV
CCCCCCEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEECEEEECCCCCCHHHH
QDVPNTYAGGWVGKGLFRNRPHDAVVIGLANVNWSRDIPDGPIWESVLELGYQFMLGSNV
HHCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEECCCC
SIQPGVQYIFNPMGKGDVDDPLLLGLQMSFSF
EECCCHHHHCCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MMRSFCFGLLRAMACLSLVASSLNAVRAEPREDRSELSPDVERLEVIAQPWLHDWLWLPE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCC
WIRLSFNYTNEIDANPSGGNQQTGTYTHNVAINSAFSSGFGKEASEWQEIDHWTLNITAS
EEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCCHHHHHCCCEEEEEEEC
QRSGTSLSQKIPNELAVQQIYGYGQTFRLAGLWLERNQAEDGLLKMKFGKFATFDDFASS
CCCCCCHHHHCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHCCC
PLYCFYTNNGFCGQNWGIPNSLPVMAYPANQYGFVFYLGEEDGPHVRSGTYQINPDGAEP
CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEECCEEEECCCCCCC
AFHGADFQIRDSDGLAQFVQFNVPLGSGKPQAARRLEDGSVVLVPEDELEVYYVSGLPQP
CCCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCC
GLQLGGWIGNWQFPLVNGNGKTSESNEGVYGLVSVPWDFGGLVLDGRLWANATYGLTQSV
CCCCCCEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEECEEEECCCCCCHHHH
QDVPNTYAGGWVGKGLFRNRPHDAVVIGLANVNWSRDIPDGPIWESVLELGYQFMLGSNV
HHCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCEEEEECCCC
SIQPGVQYIFNPMGKGDVDDPLLLGLQMSFSF
EECCCHHHHCCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]