| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023609
Identifier: 124023609
GI number: 124023609
Start: 1674742
End: 1675620
Strand: Direct
Name: 124023609
Synonym: P9303_19091
Alternate gene names: NA
Gene position: 1674742-1675620 (Clockwise)
Preceding gene: 124023608
Following gene: 124023610
Centisome position: 62.43
GC content: 36.63
Gene sequence:
>879_bases TTGCAAAGGAAAGATCCCCCACCAGCATATTATGATACATTTCCTGATAATTGGAGGGAGTTTATCGACAAGTTGATTAT AGACCATCCAAACCATAGGAATAATGAGCTTTCGATCAGATTGTTGCGCCAAAATATAAAATCAAAACTCGAAGCAGAGG TTTACGCTGCAATGCTTGATGGTTGTTCGGCTACAGCGATACTTGAATCACGTAGACTTTTTAATATATTTGATTATATC TATAAAAATGATATTTGGCCATTCTTTGGAATGGGTGCATCACACTGCGATGCTTCATTGTCAGATTTAGGCCCTTTCCC AGACATATCAATAATAGAGGGTAGTTTAAATGTTGCGAAGCAATATGAAATCATACTAGATGAACTGAATCGTGTGCGTA GAAGTATTAGAGCCGAAACTAGAGAATTTATTTATACAGGCACTTGGCGCTCACTTGACATATGGAGTTCAGGAGAAAAA GAATTACCCGCTGAAGATATGTTTGCAAAGACGATAGGCCTGATGCGCTCAATCAAAGTATTCAATACATTATACGAATA TTCAAAGTCGAATAATCCTCTTAGTGGTTATTTTATCCGTATCTCTTCACTCAAGCCTGATACGATCATACTTCCACACT TTGGAATTACAAATACACGAGTAAGGATCCAGATACCACTTATAATTCCAGACGGTGAGCTATTTATTTATTGCCATAAT CAGAAGAGATCTTATGAATATGGTACTCCTATAATATTAAATGACTCTTATATTCATGGAGTTAAAAATCAGGCTGACGG AGATAGGGTGATACTTTTAGCAGATCTACCCCACCCTTCTGCATCACTAGATCAATTAAAAGATTTTAGAGATGGTTAA
Upstream 100 bases:
>100_bases CCTAAAGTATCTATTGAAAACGTTGAGTCAAAGCTCTTAGAGTTTGTAGACGATATAAATGAAATCAATGAAAAGGTTAA TATGCTAAAAGGAGCTTAAT
Downstream 100 bases:
>100_bases ACAAGAGCTATTAGAAGTATGATTTCTATTCTGGAATGTATTGAAAGACTTAGTAGATCATTTCCGCTCAACTCTTGTAG CTCTTCTTTCGATTTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MQRKDPPPAYYDTFPDNWREFIDKLIIDHPNHRNNELSIRLLRQNIKSKLEAEVYAAMLDGCSATAILESRRLFNIFDYI YKNDIWPFFGMGASHCDASLSDLGPFPDISIIEGSLNVAKQYEIILDELNRVRRSIRAETREFIYTGTWRSLDIWSSGEK ELPAEDMFAKTIGLMRSIKVFNTLYEYSKSNNPLSGYFIRISSLKPDTIILPHFGITNTRVRIQIPLIIPDGELFIYCHN QKRSYEYGTPIILNDSYIHGVKNQADGDRVILLADLPHPSASLDQLKDFRDG
Sequences:
>Translated_292_residues MQRKDPPPAYYDTFPDNWREFIDKLIIDHPNHRNNELSIRLLRQNIKSKLEAEVYAAMLDGCSATAILESRRLFNIFDYI YKNDIWPFFGMGASHCDASLSDLGPFPDISIIEGSLNVAKQYEIILDELNRVRRSIRAETREFIYTGTWRSLDIWSSGEK ELPAEDMFAKTIGLMRSIKVFNTLYEYSKSNNPLSGYFIRISSLKPDTIILPHFGITNTRVRIQIPLIIPDGELFIYCHN QKRSYEYGTPIILNDSYIHGVKNQADGDRVILLADLPHPSASLDQLKDFRDG >Mature_292_residues MQRKDPPPAYYDTFPDNWREFIDKLIIDHPNHRNNELSIRLLRQNIKSKLEAEVYAAMLDGCSATAILESRRLFNIFDYI YKNDIWPFFGMGASHCDASLSDLGPFPDISIIEGSLNVAKQYEIILDELNRVRRSIRAETREFIYTGTWRSLDIWSSGEK ELPAEDMFAKTIGLMRSIKVFNTLYEYSKSNNPLSGYFIRISSLKPDTIILPHFGITNTRVRIQIPLIIPDGELFIYCHN QKRSYEYGTPIILNDSYIHGVKNQADGDRVILLADLPHPSASLDQLKDFRDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14589866, Length=177, Percent_Identity=25.4237288135593, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI258613943, Length=177, Percent_Identity=25.4237288135593, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33672; Mature: 33672
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKDPPPAYYDTFPDNWREFIDKLIIDHPNHRNNELSIRLLRQNIKSKLEAEVYAAMLD CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GCSATAILESRRLFNIFDYIYKNDIWPFFGMGASHCDASLSDLGPFPDISIIEGSLNVAK CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCHHHCCCCCCCEEEECCCCHHH QYEIILDELNRVRRSIRAETREFIYTGTWRSLDIWSSGEKELPAEDMFAKTIGLMRSIKV HHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH FNTLYEYSKSNNPLSGYFIRISSLKPDTIILPHFGITNTRVRIQIPLIIPDGELFIYCHN HHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEEECCCEEEEECC QKRSYEYGTPIILNDSYIHGVKNQADGDRVILLADLPHPSASLDQLKDFRDG CCCCCCCCCCEEEECHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCC >Mature Secondary Structure MQRKDPPPAYYDTFPDNWREFIDKLIIDHPNHRNNELSIRLLRQNIKSKLEAEVYAAMLD CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GCSATAILESRRLFNIFDYIYKNDIWPFFGMGASHCDASLSDLGPFPDISIIEGSLNVAK CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCHHHCCCCCCCEEEECCCCHHH QYEIILDELNRVRRSIRAETREFIYTGTWRSLDIWSSGEKELPAEDMFAKTIGLMRSIKV HHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH FNTLYEYSKSNNPLSGYFIRISSLKPDTIILPHFGITNTRVRIQIPLIIPDGELFIYCHN HHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEEECCCEEEEECC QKRSYEYGTPIILNDSYIHGVKNQADGDRVILLADLPHPSASLDQLKDFRDG CCCCCCCCCCEEEECHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA