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The map label for this gene is dnaQ

Identifier: 124023602

GI number: 124023602

Start: 1662829

End: 1663794

Strand: Direct

Name: dnaQ

Synonym: P9303_19021

Alternate gene names: NA

Gene position: 1662829-1663794 (Clockwise)

Preceding gene: 124023599

Following gene: 124023603

Centisome position: 61.98

GC content: 52.38

Gene sequence:

>966_bases
ATGGGTGCGGGAGAATACAAGCAATCGATCGATGAACACGGCGTGGGGGAAGCAAAGCAGCATCTCTTTGGAGCTGGTCA
GTTAGATCTTCTCCCCGATCTCAATGCAGAAGAGGCAGTTGTCACTCCTTCAAAGGCTGTCTCTACCTCAAAGGCTGTCT
CTACCTCAAAGGCTGTCTCTACTTCAAAGGCTGTCTCTTTACCGCAACCTCATGCACCAGTGGCACTGCCTTCATTGCAT
CGAGAAGCTTTGAGCTCACTGCCAGAGATGCTGCTGATCATCGATACGGAAACCACTGGATTGGATCCGAAGCGAGGTCA
ATGCCTAGAGGTTGGAGCCATCCTTTTCCATGCACCGCAGCGTGCTGTGCTTGCCCAGCATTCCTTTTTGCTACCTGTGG
AAACCAATGCGGCTGAATCAATCAATCGCATCCCCGCTGAGGTCACTCGCTTGGATCAGCCTTGGCGACAAGGGCTGGAC
TATTTCCAAGCCTTACTGGATGCCGCTGATCTGTTAGTTGCTCACAATGCTGGCTTCGATCGTCAGTGGTTCGGGAAGGA
TCAACTTCCAGCTGTCTCCAAGCCCTGGCTGTGCACGATGGAAGACATCGCTTGGCCAGTTGATCGTCAGCTTCGTTCCA
GGCCTTCTGTAAGAGATTTAGCTCTCGCTTATGGCGTGCCGGTATGGGCCGCACATCGTGCTCTCACCGACTGCATTTAT
CTCGCCGAGGTGTTCGCCCGTTGCAAGGATCTCGAAACTCTGCTGCTTCATGGGCTAGAGCCAAGGCGTTTGATGCGTGC
CCAGGTGTCTTATGCACAAAGACATTTAGCCAAGGAAGCTGGGTTTCGTTGGAATGATCCAATTCAAGGTGCCTGGACTC
GACGCTTAAGTGATCGAGAGGCCGCCAAACTGGAATTCCAAGTGGTTTCCATTGATCAACAAGAGGAGCAGCCATTGAGT
GCATAA

Upstream 100 bases:

>100_bases
TTGCCATTTTGATCGACCAGATCAATGGCAGGAGCCTTATCACCAACTTGAAGGGCCATGCAGAAGCTCGCATCTATGAC
GCACCCTAGAGAGCCCCTTG

Downstream 100 bases:

>100_bases
CGTTGCTTTCGATGGCATCATCCATTTGAGAAAAGGTTGAGCTGCCAAACATCCTTGCTCCGATAGCGTTGAATTCTGAT
TGATTTCCTTAGTCAAGAGC

Product: DNA polymerase III subunit epsilon

Products: diphosphate; DNAn+1

Alternate protein names: Exonuclease; Exonuclease RNAse T/DNA Polymerase III; Exonuclease RNAse T And DNA Polymerase III

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MGAGEYKQSIDEHGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVSTSKAVSTSKAVSTSKAVSLPQPHAPVALPSLH
REALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLD
YFQALLDAADLLVAHNAGFDRQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIY
LAEVFARCKDLETLLLHGLEPRRLMRAQVSYAQRHLAKEAGFRWNDPIQGAWTRRLSDREAAKLEFQVVSIDQQEEQPLS
A

Sequences:

>Translated_321_residues
MGAGEYKQSIDEHGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVSTSKAVSTSKAVSTSKAVSLPQPHAPVALPSLH
REALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLD
YFQALLDAADLLVAHNAGFDRQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIY
LAEVFARCKDLETLLLHGLEPRRLMRAQVSYAQRHLAKEAGFRWNDPIQGAWTRRLSDREAAKLEFQVVSIDQQEEQPLS
A
>Mature_320_residues
GAGEYKQSIDEHGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVSTSKAVSTSKAVSTSKAVSLPQPHAPVALPSLHR
EALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQRAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLDY
FQALLDAADLLVAHNAGFDRQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIYL
AEVFARCKDLETLLLHGLEPRRLMRAQVSYAQRHLAKEAGFRWNDPIQGAWTRRLSDREAAKLEFQVVSIDQQEEQPLSA

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 35485; Mature: 35354

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGEYKQSIDEHGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVSTSKAVSTSKAVS
CCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH
TSKAVSLPQPHAPVALPSLHREALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQ
HHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCH
RAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLLVAHNAGFD
HHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIY
CCCCCCCCCCCCCCCCEEEHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH
LAEVFARCKDLETLLLHGLEPRRLMRAQVSYAQRHLAKEAGFRWNDPIQGAWTRRLSDRE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCH
AAKLEFQVVSIDQQEEQPLSA
HHEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
GAGEYKQSIDEHGVGEAKQHLFGAGQLDLLPDLNAEEAVVTPSKAVSTSKAVSTSKAVS
CCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH
TSKAVSLPQPHAPVALPSLHREALSSLPEMLLIIDTETTGLDPKRGQCLEVGAILFHAPQ
HHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCH
RAVLAQHSFLLPVETNAAESINRIPAEVTRLDQPWRQGLDYFQALLDAADLLVAHNAGFD
HHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RQWFGKDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTDCIY
CCCCCCCCCCCCCCCCEEEHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH
LAEVFARCKDLETLLLHGLEPRRLMRAQVSYAQRHLAKEAGFRWNDPIQGAWTRRLSDRE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCH
AAKLEFQVVSIDQQEEQPLSA
HHEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA