| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023600
Identifier: 124023600
GI number: 124023600
Start: 1661601
End: 1662329
Strand: Reverse
Name: 124023600
Synonym: P9303_19001
Alternate gene names: NA
Gene position: 1662329-1661601 (Counterclockwise)
Preceding gene: 124023601
Following gene: 124023598
Centisome position: 61.97
GC content: 55.14
Gene sequence:
>729_bases ATGACCAGATGGAGACGCCTCGGCAAGGTCTGGGGACTATGGCCAGCTCAGCCAATCGCATTGGTCGAGATGGTGGGGGG CAGTTATTTGGCGGCGAGCCCCCAGCTCAGCTACCGACGATTGCTTGAAGGTTTAGCTGACCACAATCTGGCGGTTCATG CTTGGGGCTATGTGCCAGGCTTCGACCATCAGGCTCAGGCCAATGAAGCTTGGAAACATTTGCGTCGTTGTCGACAACAA CTTGAGGCCAGAGTCGGAGCCCTCCCCACACCCCTTCGCTTGGGCCATAGCCTTGGCTGCAAGTTGCATCTTCTAGCTCC AGATGGAGGTCGTAACAGCAGGGCTTTGGTGGCATTGAGCTTCAACAATTTCACGGCTGATCGTTCGATTCCCATGCTTC GCGAACTTGCACCAAAGCTTGGCTTTTACACGGAATTCAGTCCAAGCCCCAATGAAACATTGCGATTGATCCGCGAGAGT TACCACCAACCTCAGAACTTATTGGTGAGTTTTGGGGATGACAGCCTCGATCAGAGCCCAAGCCTTTTGCATAGTCTCCA GCAGCGAGTGGAAGATGCAACACAAAGCTTGCATCTTCCAGGCGATCACCTCACCCCAGCCAGTGCAGGGTTACGGCAGA ACCTTCTCGGCGACTGGGCGGATGACTCCGCCCGGGCCGAGACTCTCAAGCAATTGGTGGAAACGATCTCCTGTTGGGCA AGCCCATGA
Upstream 100 bases:
>100_bases ATGGCCAAGGAACAATCCGCCATATTTTTAATAATCTCCTCGATGGTCCTGCTCATATGCGTGAGGCTTGTCGCGTCGTG GAGGAAATCAAAAAGAAACG
Downstream 100 bases:
>100_bases ACGAGGTCGTGTTCAGGCTCTAAGCCGATCCAGCACGGAGCGATCTTCCAGGGTGCTGGTATCACCCTTGACCTCCTCTC CAGCGGCCAAAGCCCGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTRWRRLGKVWGLWPAQPIALVEMVGGSYLAASPQLSYRRLLEGLADHNLAVHAWGYVPGFDHQAQANEAWKHLRRCRQQ LEARVGALPTPLRLGHSLGCKLHLLAPDGGRNSRALVALSFNNFTADRSIPMLRELAPKLGFYTEFSPSPNETLRLIRES YHQPQNLLVSFGDDSLDQSPSLLHSLQQRVEDATQSLHLPGDHLTPASAGLRQNLLGDWADDSARAETLKQLVETISCWA SP
Sequences:
>Translated_242_residues MTRWRRLGKVWGLWPAQPIALVEMVGGSYLAASPQLSYRRLLEGLADHNLAVHAWGYVPGFDHQAQANEAWKHLRRCRQQ LEARVGALPTPLRLGHSLGCKLHLLAPDGGRNSRALVALSFNNFTADRSIPMLRELAPKLGFYTEFSPSPNETLRLIRES YHQPQNLLVSFGDDSLDQSPSLLHSLQQRVEDATQSLHLPGDHLTPASAGLRQNLLGDWADDSARAETLKQLVETISCWA SP >Mature_241_residues TRWRRLGKVWGLWPAQPIALVEMVGGSYLAASPQLSYRRLLEGLADHNLAVHAWGYVPGFDHQAQANEAWKHLRRCRQQL EARVGALPTPLRLGHSLGCKLHLLAPDGGRNSRALVALSFNNFTADRSIPMLRELAPKLGFYTEFSPSPNETLRLIRESY HQPQNLLVSFGDDSLDQSPSLLHSLQQRVEDATQSLHLPGDHLTPASAGLRQNLLGDWADDSARAETLKQLVETISCWAS P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26950; Mature: 26819
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWRRLGKVWGLWPAQPIALVEMVGGSYLAASPQLSYRRLLEGLADHNLAVHAWGYVPG CCHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCEEEEEEECCCC FDHQAQANEAWKHLRRCRQQLEARVGALPTPLRLGHSLGCKLHLLAPDGGRNSRALVALS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEE FNNFTADRSIPMLRELAPKLGFYTEFSPSPNETLRLIRESYHQPQNLLVSFGDDSLDQSP CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCH SLLHSLQQRVEDATQSLHLPGDHLTPASAGLRQNLLGDWADDSARAETLKQLVETISCWA HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC SP CC >Mature Secondary Structure TRWRRLGKVWGLWPAQPIALVEMVGGSYLAASPQLSYRRLLEGLADHNLAVHAWGYVPG CHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCEEEEEEECCCC FDHQAQANEAWKHLRRCRQQLEARVGALPTPLRLGHSLGCKLHLLAPDGGRNSRALVALS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEE FNNFTADRSIPMLRELAPKLGFYTEFSPSPNETLRLIRESYHQPQNLLVSFGDDSLDQSP CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCH SLLHSLQQRVEDATQSLHLPGDHLTPASAGLRQNLLGDWADDSARAETLKQLVETISCWA HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC SP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA