| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023567
Identifier: 124023567
GI number: 124023567
Start: 1628085
End: 1629449
Strand: Direct
Name: 124023567
Synonym: P9303_18671
Alternate gene names: NA
Gene position: 1628085-1629449 (Clockwise)
Preceding gene: 124023563
Following gene: 124023568
Centisome position: 60.69
GC content: 55.6
Gene sequence:
>1365_bases GTGAAGCTTCCAGCCCTAATGATCAATCTTGTGCCTCGCTCCCCTGCCTTAATTGGCCGGGTAGCACTCATCACAGGGTC CTTCGTTCTCGGTCAGTGGATCTTCACTGATGTGATTCATCTGCCTGGCGGTGGTCTTGGTTTGATGGTTGCTGGTGCGG GCGTCTGGTGGTTGTCAAGGCCCTCAATCCCGGCCCGTTTTGATGCACCAGATTCAGTGCAGGGCTGGATCCGTCGCTGC AAAGAGGTCCTTGATCAGTTTGAGGCCCTAGAGGATGAGGAAGATGTGGTTGCGCTTCGCCAACAGCGCAGCGAGGCCCT TGATGCCGTTTTACAGCGTTCCGAACCTCAAAAAGTTTCTTTTGTGAATTCCGGAGAGGGTTCTCTTGAGGATCATCCCG AAGTTCAGACAGCCATTGCAGGATCTACTCCACTGAGCATCAGCTGGGCGCGGCCTCTCTCTCAAACAGGCGAGTCTTGG GTCTGGCCCGCAGCTCTACAAGAGCAGGATGTCTTGCTCTATGTCTTGCCTTTGCCGTTGATGGCAGCAGACCTTCTTTG GTTAGAGAGAGTGCCAGCGAATCAACCAATCTGGCTGATCGTCTCTTGGCAAGATTCATCGACTTGGGTCGATCAGCTGC AGGCACTTCAGGCTCAGTTGCCACAACGCTTAAGCGGACAGGTGCTGCGTTGGACAGGCAATCAAGACGATCTTTCAGAA GCCCTTGCACCGGTGAGACGTCTGTTAGAGCACCCTCAGCGAAATCTTGAGATCACGCGCAAGCGCTTGTTGGGCAGTCT GCACCGCAATTGGCAAGCCGAGTTAGAGCAGCTTCGCAGGCAGAGGTTCCTTGGACTCCAACAGCGCACTCAATGGGTGG TTGCAGGGGCTGTTTTTGCCTCTCCTTTACCCACGACGGATCTTCTAGCTGTGGCTGTGGTCAACGGCTTGATGATTAAA GAGATGGCGGGGATTTGGAAGTGTTCCTTGAAGCCAGAGGTTCTGCAGTTGGCAGCTCGCCAGTTGGCTGGGGCGGCTCT AGCCCAGGGAGTGGTGGAGTGGAGTGGCCAAGCTCTATTGGGCGTAGCCAAGCTTGACGGCAGCAGCTGGCTTGCAGCGG GTACTCTTCAGGCCCTCAGCGCGGCTTACCTAACCCGTGTTGTTGGACGCTCAATGGCCGATTGGCTGGCATTGAACAGT GGCGTTGCAGAGCCGGATTTGGAGGCCTTAAAGATTCAGGCACCGCTGCTGGTTGCTAAGGCTGCAGAGCAGGAACGTCT CGATTGGTCCAGCTTTTCACAACAGGGAATCAGCTGGATCAAGGAGTTGGCTCGCCAACCAGGCGCCTCATCGAACCCTG CTTAG
Upstream 100 bases:
>100_bases CCATTTGAGGAGCTGAATGAACTCAAACTCTTCTCTCAGCCATTAATTAAACGAAGAAGGTCACGTAGGCTGGTAAGGCT TGCACGTCAGGTGGTGCCCC
Downstream 100 bases:
>100_bases ACTGCGCAAACAAACTTCATGAAGTTTGTTTGCGCACTGCGTCGCAATGTGAGGAAAGCAGTTGCTGCAAGTGAGCTTTG CTGCCCCATTTTTATATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MKLPALMINLVPRSPALIGRVALITGSFVLGQWIFTDVIHLPGGGLGLMVAGAGVWWLSRPSIPARFDAPDSVQGWIRRC KEVLDQFEALEDEEDVVALRQQRSEALDAVLQRSEPQKVSFVNSGEGSLEDHPEVQTAIAGSTPLSISWARPLSQTGESW VWPAALQEQDVLLYVLPLPLMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLSE ALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQRFLGLQQRTQWVVAGAVFASPLPTTDLLAVAVVNGLMIK EMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALLGVAKLDGSSWLAAGTLQALSAAYLTRVVGRSMADWLALNS GVAEPDLEALKIQAPLLVAKAAEQERLDWSSFSQQGISWIKELARQPGASSNPA
Sequences:
>Translated_454_residues MKLPALMINLVPRSPALIGRVALITGSFVLGQWIFTDVIHLPGGGLGLMVAGAGVWWLSRPSIPARFDAPDSVQGWIRRC KEVLDQFEALEDEEDVVALRQQRSEALDAVLQRSEPQKVSFVNSGEGSLEDHPEVQTAIAGSTPLSISWARPLSQTGESW VWPAALQEQDVLLYVLPLPLMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLSE ALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQRFLGLQQRTQWVVAGAVFASPLPTTDLLAVAVVNGLMIK EMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALLGVAKLDGSSWLAAGTLQALSAAYLTRVVGRSMADWLALNS GVAEPDLEALKIQAPLLVAKAAEQERLDWSSFSQQGISWIKELARQPGASSNPA >Mature_454_residues MKLPALMINLVPRSPALIGRVALITGSFVLGQWIFTDVIHLPGGGLGLMVAGAGVWWLSRPSIPARFDAPDSVQGWIRRC KEVLDQFEALEDEEDVVALRQQRSEALDAVLQRSEPQKVSFVNSGEGSLEDHPEVQTAIAGSTPLSISWARPLSQTGESW VWPAALQEQDVLLYVLPLPLMAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLSE ALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQRFLGLQQRTQWVVAGAVFASPLPTTDLLAVAVVNGLMIK EMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALLGVAKLDGSSWLAAGTLQALSAAYLTRVVGRSMADWLALNS GVAEPDLEALKIQAPLLVAKAAEQERLDWSSFSQQGISWIKELARQPGASSNPA
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49809; Mature: 49809
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPALMINLVPRSPALIGRVALITGSFVLGQWIFTDVIHLPGGGLGLMVAGAGVWWLSR CCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHEECCCEEEECC PSIPARFDAPDSVQGWIRRCKEVLDQFEALEDEEDVVALRQQRSEALDAVLQRSEPQKVS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE FVNSGEGSLEDHPEVQTAIAGSTPLSISWARPLSQTGESWVWPAALQEQDVLLYVLPLPL EEECCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHCCCCCCCCHHCCCCCEEEEEECHHH MAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLSE HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCEEEECCCHHHHHH ALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQRFLGLQQRTQWVVAGAVFA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC SPLPTTDLLAVAVVNGLMIKEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GVAKLDGSSWLAAGTLQALSAAYLTRVVGRSMADWLALNSGVAEPDLEALKIQAPLLVAK EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCHHHHH AAEQERLDWSSFSQQGISWIKELARQPGASSNPA HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKLPALMINLVPRSPALIGRVALITGSFVLGQWIFTDVIHLPGGGLGLMVAGAGVWWLSR CCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHEECCCEEEECC PSIPARFDAPDSVQGWIRRCKEVLDQFEALEDEEDVVALRQQRSEALDAVLQRSEPQKVS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE FVNSGEGSLEDHPEVQTAIAGSTPLSISWARPLSQTGESWVWPAALQEQDVLLYVLPLPL EEECCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHCCCCCCCCHHCCCCCEEEEEECHHH MAADLLWLERVPANQPIWLIVSWQDSSTWVDQLQALQAQLPQRLSGQVLRWTGNQDDLSE HHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCEEEECCCHHHHHH ALAPVRRLLEHPQRNLEITRKRLLGSLHRNWQAELEQLRRQRFLGLQQRTQWVVAGAVFA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC SPLPTTDLLAVAVVNGLMIKEMAGIWKCSLKPEVLQLAARQLAGAALAQGVVEWSGQALL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GVAKLDGSSWLAAGTLQALSAAYLTRVVGRSMADWLALNSGVAEPDLEALKIQAPLLVAK EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCHHHHH AAEQERLDWSSFSQQGISWIKELARQPGASSNPA HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA