| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023542
Identifier: 124023542
GI number: 124023542
Start: 1601109
End: 1601588
Strand: Reverse
Name: 124023542
Synonym: P9303_18421
Alternate gene names: NA
Gene position: 1601588-1601109 (Counterclockwise)
Preceding gene: 124023551
Following gene: 124023541
Centisome position: 59.7
GC content: 55.21
Gene sequence:
>480_bases ATGTCCATTCCAGAGCTGATTGAAACCGCAACCGGATGGCTTGCCTGGTCAGGCCTAGCCCTAAGCCTAATGACCCTGAT TGCTTTCTTGGTTCGTTGGGGACAACGCTTCCGGCTGGTGGGAGTGACCAGCTTCAACCTTCTTCTTTTGGCAAGCTGTT GGGCTTTTGGCGTGAGCTATACCCCCCCCCTCAAGGTGGAAGGAGCTCTGGTGGTACCCGTGGTGTTTGACAACAGCACG GACCTTGTTGTCGCCCAGGCTCCCGACGACTTTCCTGATGAAGCGGTCGAAGCCACATTGGAGCAACTAGCAGGCAACAT CCATCGCGGTGGATATAACGGCAGTGAAGTGCATGTGCGGCTACGCAGGCTGGAATCGGTTGGAGAGGGTGTCAGTCAAC CCGTCATCCTCGGTGAAGTCATACGCGACTTGCGTCAGAACATCACGCTGCCATTAGCCGAAAAAAGTGATGCAGGTTGA
Upstream 100 bases:
>100_bases CGCCCTTTAGCCAAAGATTGACTCTTCTGTCCCATCGATTTGAGTCAACCTTCCTGGGAGCGTGCGAAATATAAGTAGTT CTCTTGAGGTTCACCAGTCC
Downstream 100 bases:
>100_bases TCAACCTCTGGGAGATTTACCTCAGAGCTTTCGTGACGAACAAGCCTTGCTCGTGGCCGCAGGGATCACAACATGGAGCG CATTGAAACGCCTCGAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSIPELIETATGWLAWSGLALSLMTLIAFLVRWGQRFRLVGVTSFNLLLLASCWAFGVSYTPPLKVEGALVVPVVFDNST DLVVAQAPDDFPDEAVEATLEQLAGNIHRGGYNGSEVHVRLRRLESVGEGVSQPVILGEVIRDLRQNITLPLAEKSDAG
Sequences:
>Translated_159_residues MSIPELIETATGWLAWSGLALSLMTLIAFLVRWGQRFRLVGVTSFNLLLLASCWAFGVSYTPPLKVEGALVVPVVFDNST DLVVAQAPDDFPDEAVEATLEQLAGNIHRGGYNGSEVHVRLRRLESVGEGVSQPVILGEVIRDLRQNITLPLAEKSDAG >Mature_158_residues SIPELIETATGWLAWSGLALSLMTLIAFLVRWGQRFRLVGVTSFNLLLLASCWAFGVSYTPPLKVEGALVVPVVFDNSTD LVVAQAPDDFPDEAVEATLEQLAGNIHRGGYNGSEVHVRLRRLESVGEGVSQPVILGEVIRDLRQNITLPLAEKSDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf51 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019664 [H]
Pfam domain/function: PF10726 DUF2518 [H]
EC number: NA
Molecular weight: Translated: 17228; Mature: 17097
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPELIETATGWLAWSGLALSLMTLIAFLVRWGQRFRLVGVTSFNLLLLASCWAFGVSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCC TPPLKVEGALVVPVVFDNSTDLVVAQAPDDFPDEAVEATLEQLAGNIHRGGYNGSEVHVR CCCCEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LRRLESVGEGVSQPVILGEVIRDLRQNITLPLAEKSDAG HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SIPELIETATGWLAWSGLALSLMTLIAFLVRWGQRFRLVGVTSFNLLLLASCWAFGVSY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCC TPPLKVEGALVVPVVFDNSTDLVVAQAPDDFPDEAVEATLEQLAGNIHRGGYNGSEVHVR CCCCEECCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LRRLESVGEGVSQPVILGEVIRDLRQNITLPLAEKSDAG HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]