Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023505

Identifier: 124023505

GI number: 124023505

Start: 1572368

End: 1573276

Strand: Direct

Name: 124023505

Synonym: P9303_18051

Alternate gene names: NA

Gene position: 1572368-1573276 (Clockwise)

Preceding gene: 124023504

Following gene: 124023509

Centisome position: 58.61

GC content: 51.82

Gene sequence:

>909_bases
ATGCGCATGGATGATGCCCCCCCATTGGGGGCTTTGAATTTAAAGCGGGAGCATCCTCCAAACCTTCAGTCGCATTATTC
GAGTCCATGGGGCACGACAGCTTGGCGGCAAGATGTTCCTGTTAGCGACAGACCGCATGATTTAGAAGCTCATTCACGTT
GGTGGCTGTGGACAAGTCGTCGTCTGCGAAAAGGCCATGGACCGCTGGAGCAAGGAAAGTATCGAACCTTGGCTCCGAAG
CATATGGTTCAAGCATTACTGCGTGGGAAAGACGTCCATCGTCTTGAAGTGCGAACGGCCGTGGCATTCATCATTGGTCC
GCTGTTGTTCGTTATTGGCAGTGTTTTGCTGATGAGCAAACTTGGCTCGGGTGCAGCGCTCTTGGCAATTGGCTCCGTTT
TTTTTACGGCAGGAGGTTGGTTTCAGTTGGAACAGGCTTTGTTGGTGACCCGTGGTTTGCTCAATCGGAAGCAGCGCTGG
GGCTGGTGTGGAATTTGGTGTGCGCTAACGCAAAGCATTGGCACCGTTCTTTTCAACATGGAGACATTTTCAACCTGGGG
GTTGCCTACGCTGAATGGAACACCATGGCTAATGCTGGAGGTTGCTCCCAACATTCTCGGGTCAGTGCTGTTTGTTATTT
CGGCGATCTTCGGTCTTCTTGAGGTAGGTCATGGCCGTCTCTTCGTCATACAGCCGCACCATCTTGGTTGGTGGGTGGCT
GTTTTGAATGCCCTCGGATGTCTGTGGTTTATGCAAGCAGCCATCGCTGCTATCCCTGTAGATTTATCCATAGCCGCTGT
GCTTGATCCTCAGGTTGCGATCCGAGCAACCTTATTGGGAGCCTTAGCTTTTACTGCTGTAGGTGTACTGAGCCTTGCCG
AGTGTAGTGAGGATGAGGTTAAGACCTAA

Upstream 100 bases:

>100_bases
GCCATAACTCATTTCGAGAGTCATCCTGTCAAGATCAGTCTTAACGCTACTGAAGCAGCGTCTACTAATCATCTCGGCCG
TTCAATGGTTGAATCCCTTG

Downstream 100 bases:

>100_bases
AATTGCATTTAGGAGAGTCTTATCTCTTTGCTGATGATCAATAAAGCTTGTCTTACGACATACAAATCAACTCCTCACTA
GAAAATCAAGGGGGTTTTTC

Product: NADH-ubiquinone/plastoquinone

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRMDDAPPLGALNLKREHPPNLQSHYSSPWGTTAWRQDVPVSDRPHDLEAHSRWWLWTSRRLRKGHGPLEQGKYRTLAPK
HMVQALLRGKDVHRLEVRTAVAFIIGPLLFVIGSVLLMSKLGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRW
GWCGIWCALTQSIGTVLFNMETFSTWGLPTLNGTPWLMLEVAPNILGSVLFVISAIFGLLEVGHGRLFVIQPHHLGWWVA
VLNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSEDEVKT

Sequences:

>Translated_302_residues
MRMDDAPPLGALNLKREHPPNLQSHYSSPWGTTAWRQDVPVSDRPHDLEAHSRWWLWTSRRLRKGHGPLEQGKYRTLAPK
HMVQALLRGKDVHRLEVRTAVAFIIGPLLFVIGSVLLMSKLGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRW
GWCGIWCALTQSIGTVLFNMETFSTWGLPTLNGTPWLMLEVAPNILGSVLFVISAIFGLLEVGHGRLFVIQPHHLGWWVA
VLNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSEDEVKT
>Mature_302_residues
MRMDDAPPLGALNLKREHPPNLQSHYSSPWGTTAWRQDVPVSDRPHDLEAHSRWWLWTSRRLRKGHGPLEQGKYRTLAPK
HMVQALLRGKDVHRLEVRTAVAFIIGPLLFVIGSVLLMSKLGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRW
GWCGIWCALTQSIGTVLFNMETFSTWGLPTLNGTPWLMLEVAPNILGSVLFVISAIFGLLEVGHGRLFVIQPHHLGWWVA
VLNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSEDEVKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33258; Mature: 33258

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMDDAPPLGALNLKREHPPNLQSHYSSPWGTTAWRQDVPVSDRPHDLEAHSRWWLWTSR
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
RLRKGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTAVAFIIGPLLFVIGSVLLMSK
HHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRWGWCGIWCALTQSIGTVLFNM
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
ETFSTWGLPTLNGTPWLMLEVAPNILGSVLFVISAIFGLLEVGHGRLFVIQPHHLGWWVA
HHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
VLNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSEDEV
HHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KT
CC
>Mature Secondary Structure
MRMDDAPPLGALNLKREHPPNLQSHYSSPWGTTAWRQDVPVSDRPHDLEAHSRWWLWTSR
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
RLRKGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTAVAFIIGPLLFVIGSVLLMSK
HHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRWGWCGIWCALTQSIGTVLFNM
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
ETFSTWGLPTLNGTPWLMLEVAPNILGSVLFVISAIFGLLEVGHGRLFVIQPHHLGWWVA
HHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
VLNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSEDEV
HHHHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA