| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is ftn [H]
Identifier: 124023474
GI number: 124023474
Start: 1549682
End: 1550215
Strand: Reverse
Name: ftn [H]
Synonym: P9303_17741
Alternate gene names: 124023474
Gene position: 1550215-1549682 (Counterclockwise)
Preceding gene: 124023475
Following gene: 124023472
Centisome position: 57.79
GC content: 46.63
Gene sequence:
>534_bases ATGAATGATCTAACCAAGGCGATCAACCTTCATTTGGCCTGTGAGTTTCAGGCAAGTCATACCTACCTAGCCATGTCAAT TTGGCTTCGCGAGAAGGATTTAGCCGGATTTTCCTCGTACATGCAAATTAAGAGCCAAGAGGAACGTGGTCATGCAGATC GACTTATTGCCTACCTTGTTGATTGCGATGAACAGGTCGAACTTCCCGCTGTTGAAGCTCCACAACGCAATTGGGTCTCC ACCCAGGATCTCTTTGATCAGGTCTACGAGCTAGAAAAAGATGTAACAGCATCAATTAACCGCATTTATTCCATAGCCGA ACAAGCTGGTGAGCGTAGTGCGACCGCCATGCTCGATTGGTTCATCGCAGAACAGTTACAAGAGGAAGCAGAAGCTCGTT TCGTGCGTAAGCGCCTTCGCCTGGCTGGTGATAACACTGCTGCGCTACTTCTTTTGGACCAACAGTTTCTTGATGGAACT GCCTTGACAACTGTCAAAGGTGGTCTTACTGGATTAAAACAATCTGAGAATTAA
Upstream 100 bases:
>100_bases AAGTATCCTGCACCTCAGCACTTCTCCATTAGTATGAATAGGCACTCTCATTTAAAAAAGTACATTTCACCAATGATGGC CTTAAACGTTAAACCTGAGC
Downstream 100 bases:
>100_bases TCCAAAGTTTTTATGATCACTATTCAATAATACTAGAAACTATTATTCGCCACTGTTTGTTGCGGCTTACTTTCCAAGCG ATTCCATTGCAATGATCTGG
Product: Ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWVS TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT ALTTVKGGLTGLKQSEN
Sequences:
>Translated_177_residues MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWVS TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT ALTTVKGGLTGLKQSEN >Mature_177_residues MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWVS TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT ALTTVKGGLTGLKQSEN
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=153, Percent_Identity=26.797385620915, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20001; Mature: 20001
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLV CCCHHHHHEEEEEEEEECCCEEEEEHEEHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHH DCDEQVELPAVEAPQRNWVSTQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGTALTTVKGGLTGLKQSEN HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLV CCCHHHHHEEEEEEEEECCCEEEEEHEEHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHH DCDEQVELPAVEAPQRNWVSTQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGTALTTVKGGLTGLKQSEN HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809765; 10688204 [H]