Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is ftn [H]

Identifier: 124023474

GI number: 124023474

Start: 1549682

End: 1550215

Strand: Reverse

Name: ftn [H]

Synonym: P9303_17741

Alternate gene names: 124023474

Gene position: 1550215-1549682 (Counterclockwise)

Preceding gene: 124023475

Following gene: 124023472

Centisome position: 57.79

GC content: 46.63

Gene sequence:

>534_bases
ATGAATGATCTAACCAAGGCGATCAACCTTCATTTGGCCTGTGAGTTTCAGGCAAGTCATACCTACCTAGCCATGTCAAT
TTGGCTTCGCGAGAAGGATTTAGCCGGATTTTCCTCGTACATGCAAATTAAGAGCCAAGAGGAACGTGGTCATGCAGATC
GACTTATTGCCTACCTTGTTGATTGCGATGAACAGGTCGAACTTCCCGCTGTTGAAGCTCCACAACGCAATTGGGTCTCC
ACCCAGGATCTCTTTGATCAGGTCTACGAGCTAGAAAAAGATGTAACAGCATCAATTAACCGCATTTATTCCATAGCCGA
ACAAGCTGGTGAGCGTAGTGCGACCGCCATGCTCGATTGGTTCATCGCAGAACAGTTACAAGAGGAAGCAGAAGCTCGTT
TCGTGCGTAAGCGCCTTCGCCTGGCTGGTGATAACACTGCTGCGCTACTTCTTTTGGACCAACAGTTTCTTGATGGAACT
GCCTTGACAACTGTCAAAGGTGGTCTTACTGGATTAAAACAATCTGAGAATTAA

Upstream 100 bases:

>100_bases
AAGTATCCTGCACCTCAGCACTTCTCCATTAGTATGAATAGGCACTCTCATTTAAAAAAGTACATTTCACCAATGATGGC
CTTAAACGTTAAACCTGAGC

Downstream 100 bases:

>100_bases
TCCAAAGTTTTTATGATCACTATTCAATAATACTAGAAACTATTATTCGCCACTGTTTGTTGCGGCTTACTTTCCAAGCG
ATTCCATTGCAATGATCTGG

Product: Ferritin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWVS
TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT
ALTTVKGGLTGLKQSEN

Sequences:

>Translated_177_residues
MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWVS
TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT
ALTTVKGGLTGLKQSEN
>Mature_177_residues
MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWVS
TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT
ALTTVKGGLTGLKQSEN

Specific function: Iron-storage protein [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1788216, Length=153, Percent_Identity=26.797385620915, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 20001; Mature: 20001

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLV
CCCHHHHHEEEEEEEEECCCEEEEEHEEHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHH
DCDEQVELPAVEAPQRNWVSTQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
FIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGTALTTVKGGLTGLKQSEN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLV
CCCHHHHHEEEEEEEEECCCEEEEEHEEHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHH
DCDEQVELPAVEAPQRNWVSTQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
FIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGTALTTVKGGLTGLKQSEN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8809765; 10688204 [H]