| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023470
Identifier: 124023470
GI number: 124023470
Start: 1545825
End: 1546421
Strand: Reverse
Name: 124023470
Synonym: P9303_17701
Alternate gene names: NA
Gene position: 1546421-1545825 (Counterclockwise)
Preceding gene: 124023472
Following gene: 124023468
Centisome position: 57.64
GC content: 56.11
Gene sequence:
>597_bases ATGAGCTTCCGATTCCTGCCAGATGATCCAATTCCAGCAGTGCGGATGCCAACAGGGCAATCCATCCTGATCGATCCCGC CGCTCGTTCAGGCGGCGCTTGTATCGAAGTCGTTGAGGGTATCGCCCGCGTTTACTGCCCATGCGAAGAAACTGAAGGAA TGACTCTCGCCTTTCTTCAGGAGGGTGACCAACTACGCACCGACCGCTTGTGCAGCGAAGGGGTCTGCGTCGAAGCGCTT ACACCGTTATGTTTTCGCAGTGATGCTGAAATCCGTGATGGGCATGACTTTGATGCGGTGAACGAATGGACCCTGCAGCT GCTTCGCATTCGTCATTTAGGCAATGCAGAGCAGCGCCTCCAGGCATTGCTCGCCCTGCTTGTTAACCGCTTAGGGCGAC GCTGTGGCGACTGGTGCGATCTCCCGTTCCGGCTCACCCATGAGCGAATTGGCGAACTGATCGGCTCTACGCGTGTGACC TCCACGCGACTGATCTCCAGGTTAAGGACCGCTGATCTTTTAAACGTTCCCAGCGGAGAGCCCATCTTGCGTTTGGCTCC AGCCTTAATCGAATCAGCACCTCTTGCTGCCTCATAG
Upstream 100 bases:
>100_bases CCCTCGCAACAGCCCTATTGCTATTGAGAATCGCTTGCAAAAGGCCCCGTTAAGCGTATAGGTTGCGAAGAGTTCTCAAA AAGCACTTGAGAGGTTGCGA
Downstream 100 bases:
>100_bases CTCTAAGTGAATGAAAGACCTAGTTACGACATCAGACAGCGTTATCGCCAGTCTCTGCAGAGAGGTTGACGGGATCCGCC ATCGCTGTAGCTCATTGCTA
Product: regulatory proteins, Crp family protein
Products: NA
Alternate protein names: Crp Family Regulatory Protein; Regulatory Proteins Crp Family Protein; Crp Family Regulatory Proteins; Bacterial Regulatory Protein Crp Family
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSFRFLPDDPIPAVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQEGDQLRTDRLCSEGVCVEAL TPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRLQALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVT STRLISRLRTADLLNVPSGEPILRLAPALIESAPLAAS
Sequences:
>Translated_198_residues MSFRFLPDDPIPAVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQEGDQLRTDRLCSEGVCVEAL TPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRLQALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVT STRLISRLRTADLLNVPSGEPILRLAPALIESAPLAAS >Mature_197_residues SFRFLPDDPIPAVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQEGDQLRTDRLCSEGVCVEALT PLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRLQALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVTS TRLISRLRTADLLNVPSGEPILRLAPALIESAPLAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21834; Mature: 21703
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRFLPDDPIPAVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQ CCCCCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEC EGDQLRTDRLCSEGVCVEALTPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVTSTRLISRLRTADLLNVPSGE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC PILRLAPALIESAPLAAS HHHHHHHHHHHCCCCCCC >Mature Secondary Structure SFRFLPDDPIPAVRMPTGQSILIDPAARSGGACIEVVEGIARVYCPCEETEGMTLAFLQ CCCCCCCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEC EGDQLRTDRLCSEGVCVEALTPLCFRSDAEIRDGHDFDAVNEWTLQLLRIRHLGNAEQRL CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QALLALLVNRLGRRCGDWCDLPFRLTHERIGELIGSTRVTSTRLISRLRTADLLNVPSGE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC PILRLAPALIESAPLAAS HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA