| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yhhX [C]
Identifier: 124023429
GI number: 124023429
Start: 1512191
End: 1513300
Strand: Reverse
Name: yhhX [C]
Synonym: P9303_17291
Alternate gene names: 124023429
Gene position: 1513300-1512191 (Counterclockwise)
Preceding gene: 124023430
Following gene: 124023425
Centisome position: 56.41
GC content: 54.68
Gene sequence:
>1110_bases ATGAATCCAATCCGCCCTCCAATTGGTGTTGCTATTGCCGGCCTTGGCTTCGGTGAAAGCGTTCATCTTCCGGCACTAAA AGCCAACCCAGACCTACAGCCTGTTGCCCTATGGCATCCACGCAGAGAGCGACTAGAAAAAGCCTCTAACCAGCATGAAC TTGTCGGCTATAGCGACTGGTCTGCCCTATTGACGGATCCAAAGATCGAGGCCGTGATTCTGGCAACACCACCAGGCCCG CGTTTTGAATTGGCGCTCGAAGCACTGAAAGCTGGAAAACATTTGCTTCTGGAGAAACCCGTGGCGTTGCACGCCGATCA AGTCGCTGAACTGCAACGACTGGCCATCAAGAAAAGATTGAGCGTGGCCGTGGACTTTGAATACCGTGCTGTGCCGTTGT TTATGCAAGCCAAGCGTTTGCTTGATCAAGGCATCGTGGGAACACCATGGCTGGTGAAACTTGACTGGTTAATGAGTAGT CGCGCCAATGCTTCAAGACCATGGAACTGGTATTCCCAATCCGAGGCAGGTGGCGGCGTGATTGGGGCGCTAGGTACTCA TGCCATCGACATGCTGCATTGGTTGTGTGGGCCAACTCGCCAGGTGAGTGCTCTGCTATCCACCTCGATTCAAACAAGGC CTGATCCAAGTAGTGGCGATCCGTGTGATGTGAGCAGTGAAGACGTCACCTTGGCTCAGTTAAAGCTGGGTGGAAATGAG AGGCCTGAAATTCCTGCACAGGTGAGCCTCACGGCAATTGCCCTCCAGGGAAGAGGCTGCTGGCTGGAGATCTACGGCAG CAACGGCAGCCTCTTGCTTGGCAGTGACAACCAGAAAGACTATGTGCATGGCTTTGGCCTCTGGGCAGCCGCTGCCGGTG AGCCACTACGCAGCATTAGCGCTGATTTGGATCTAGCATTCCCAACCACATGGACTGATGGTCGCATCGCCCCTGTGGCG AGGCTTCAAGGCTGGTGGGCCGAGAGCATGCGCAGTGGACAGCCAATGCTGCCAGGCCTTGCGGAAGGATGGGCCAGCCA ACAGGTATGCGACAAAATAAGGGATTCGGCTAGATCAGGACAGCGACTTGAAATCCAATCGACACTCTGA
Upstream 100 bases:
>100_bases GCATCGTTTCCGCGCAGAATGGAAACCCTCCGATGGCGATGAGCTCATCGATGCAGTCATCGATGAGGTTTGCACTGCAG AGGTGACGTAAATATCAATC
Downstream 100 bases:
>100_bases AAATAAATAAGCCTGATAGAGATAGGTGACAGTTCTGACCATCGTCTTATAAAGTCCGGGGCCGCAGGTCCAGGACTCTT TGCTTGAGAACTGGCCCCTA
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MNPIRPPIGVAIAGLGFGESVHLPALKANPDLQPVALWHPRRERLEKASNQHELVGYSDWSALLTDPKIEAVILATPPGP RFELALEALKAGKHLLLEKPVALHADQVAELQRLAIKKRLSVAVDFEYRAVPLFMQAKRLLDQGIVGTPWLVKLDWLMSS RANASRPWNWYSQSEAGGGVIGALGTHAIDMLHWLCGPTRQVSALLSTSIQTRPDPSSGDPCDVSSEDVTLAQLKLGGNE RPEIPAQVSLTAIALQGRGCWLEIYGSNGSLLLGSDNQKDYVHGFGLWAAAAGEPLRSISADLDLAFPTTWTDGRIAPVA RLQGWWAESMRSGQPMLPGLAEGWASQQVCDKIRDSARSGQRLEIQSTL
Sequences:
>Translated_369_residues MNPIRPPIGVAIAGLGFGESVHLPALKANPDLQPVALWHPRRERLEKASNQHELVGYSDWSALLTDPKIEAVILATPPGP RFELALEALKAGKHLLLEKPVALHADQVAELQRLAIKKRLSVAVDFEYRAVPLFMQAKRLLDQGIVGTPWLVKLDWLMSS RANASRPWNWYSQSEAGGGVIGALGTHAIDMLHWLCGPTRQVSALLSTSIQTRPDPSSGDPCDVSSEDVTLAQLKLGGNE RPEIPAQVSLTAIALQGRGCWLEIYGSNGSLLLGSDNQKDYVHGFGLWAAAAGEPLRSISADLDLAFPTTWTDGRIAPVA RLQGWWAESMRSGQPMLPGLAEGWASQQVCDKIRDSARSGQRLEIQSTL >Mature_369_residues MNPIRPPIGVAIAGLGFGESVHLPALKANPDLQPVALWHPRRERLEKASNQHELVGYSDWSALLTDPKIEAVILATPPGP RFELALEALKAGKHLLLEKPVALHADQVAELQRLAIKKRLSVAVDFEYRAVPLFMQAKRLLDQGIVGTPWLVKLDWLMSS RANASRPWNWYSQSEAGGGVIGALGTHAIDMLHWLCGPTRQVSALLSTSIQTRPDPSSGDPCDVSSEDVTLAQLKLGGNE RPEIPAQVSLTAIALQGRGCWLEIYGSNGSLLLGSDNQKDYVHGFGLWAAAAGEPLRSISADLDLAFPTTWTDGRIAPVA RLQGWWAESMRSGQPMLPGLAEGWASQQVCDKIRDSARSGQRLEIQSTL
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI1789848, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787574, Length=240, Percent_Identity=26.25, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323975, Length=288, Percent_Identity=24.3055555555556, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40080; Mature: 40080
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIRPPIGVAIAGLGFGESVHLPALKANPDLQPVALWHPRRERLEKASNQHELVGYSDW CCCCCCCCCEEEEECCCCCCEECCEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEECCC SALLTDPKIEAVILATPPGPRFELALEALKAGKHLLLEKPVALHADQVAELQRLAIKKRL HHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCHHHCHHHHHHHHHHHHHHHH SVAVDFEYRAVPLFMQAKRLLDQGIVGTPWLVKLDWLMSSRANASRPWNWYSQSEAGGGV EEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCEE IGALGTHAIDMLHWLCGPTRQVSALLSTSIQTRPDPSSGDPCDVSSEDVTLAQLKLGGNE EEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC RPEIPAQVSLTAIALQGRGCWLEIYGSNGSLLLGSDNQKDYVHGFGLWAAAAGEPLRSIS CCCCCCEEEEEEEEEECCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHC ADLDLAFPTTWTDGRIAPVARLQGWWAESMRSGQPMLPGLAEGWASQQVCDKIRDSARSG CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC QRLEIQSTL CEEEEECCC >Mature Secondary Structure MNPIRPPIGVAIAGLGFGESVHLPALKANPDLQPVALWHPRRERLEKASNQHELVGYSDW CCCCCCCCCEEEEECCCCCCEECCEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEECCC SALLTDPKIEAVILATPPGPRFELALEALKAGKHLLLEKPVALHADQVAELQRLAIKKRL HHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCHHHCHHHHHHHHHHHHHHHH SVAVDFEYRAVPLFMQAKRLLDQGIVGTPWLVKLDWLMSSRANASRPWNWYSQSEAGGGV EEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCEE IGALGTHAIDMLHWLCGPTRQVSALLSTSIQTRPDPSSGDPCDVSSEDVTLAQLKLGGNE EEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC RPEIPAQVSLTAIALQGRGCWLEIYGSNGSLLLGSDNQKDYVHGFGLWAAAAGEPLRSIS CCCCCCEEEEEEEEEECCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHC ADLDLAFPTTWTDGRIAPVARLQGWWAESMRSGQPMLPGLAEGWASQQVCDKIRDSARSG CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC QRLEIQSTL CEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]