| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is mas1 [H]
Identifier: 124023409
GI number: 124023409
Start: 1491987
End: 1492697
Strand: Direct
Name: mas1 [H]
Synonym: P9303_17071
Alternate gene names: 124023409
Gene position: 1491987-1492697 (Clockwise)
Preceding gene: 124023408
Following gene: 124023410
Centisome position: 55.62
GC content: 51.48
Gene sequence:
>711_bases ATGATGCGCACGATCTTGATCAGTGGTGCCAGTCGAGGTATAGGCCGAGCAATTGCCGAACGAATGTTGGCTGATGGCCA TCGTCTTAGCCTTGGCCTACGGGACCCCAAATGCCTAATTGGTAGCTCACTTGACCCGGCAATCGCTGGTTCTGAACAAG TGTTCCTACATCCCTATGAAGCCCAGGACGTTAACGCTGCCGAAAGCTGGGTATCTGCAAGCCTGGCTCATTTCAGTGGC TTCGATAGTTTGATTCACTGTGCAGGCGTATTTCATCGCACGCCAATACGGTTTAATGATAACCAGCAGCATGAGATTGA TCAGCTCTGGCAGGTGAATGTAATGGGCCCATGGTTGCTCAGCCGCGCTGCTTGGTCTCAGCTTGAATGCCATGATGAGG CGCGCATCATTGTGTTGGTCTCAATGAGTGGCAAGCGCTCCAAGGGCCGTTTGGCTGGCTACACAGTTAGTAAGTTTGCG CTGATGGGCCTTTGTCAGACCATGCGTAACGAAGGATGGGAGCAAGGCATCCGCGTGACAGCGATTTGTCCAGGTTGGGT CAATACCGATATGGCTGCCAGGGTTAAGTCTTTGCCCAAAGAGGCGATGACTCAGCCTGATGACATCGCCTCTTTGAGCT CTCATTTGTTACAGCTACCTAACAGTTGTGTACCGTTTGAACTGAGCATGAATTGCACACATGAGATCTGA
Upstream 100 bases:
>100_bases GTGGAGCGGGATTTCATCAAAAGGTTTTCAGATTCTGCAGAGTCATGAGCATCACGAGAACTACCAGCAATAGTGTTTTT GGATTTGCGACCATTCAGGA
Downstream 100 bases:
>100_bases ACCCTTAGTTGAGTTGATGGGACTTTGTTATTGGCAAAGAAATGACGAGCAAAACTTTCCAAACCTCTTCAATAACATGG ATTCTTCGCGATAAAAATCG
Product: Short-chain dehydrogenase/reductase (SDR) superfamily
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYEAQDVNAAESWVSASLAHFSG FDSLIHCAGVFHRTPIRFNDNQQHEIDQLWQVNVMGPWLLSRAAWSQLECHDEARIIVLVSMSGKRSKGRLAGYTVSKFA LMGLCQTMRNEGWEQGIRVTAICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSHLLQLPNSCVPFELSMNCTHEI
Sequences:
>Translated_236_residues MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYEAQDVNAAESWVSASLAHFSG FDSLIHCAGVFHRTPIRFNDNQQHEIDQLWQVNVMGPWLLSRAAWSQLECHDEARIIVLVSMSGKRSKGRLAGYTVSKFA LMGLCQTMRNEGWEQGIRVTAICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSHLLQLPNSCVPFELSMNCTHEI >Mature_236_residues MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYEAQDVNAAESWVSASLAHFSG FDSLIHCAGVFHRTPIRFNDNQQHEIDQLWQVNVMGPWLLSRAAWSQLECHDEARIIVLVSMSGKRSKGRLAGYTVSKFA LMGLCQTMRNEGWEQGIRVTAICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSHLLQLPNSCVPFELSMNCTHEI
Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI33667109, Length=204, Percent_Identity=30.3921568627451, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI5031737, Length=200, Percent_Identity=30.5, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI40254992, Length=226, Percent_Identity=24.3362831858407, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1787335, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI87082100, Length=241, Percent_Identity=25.3112033195021, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=28.6458333333333, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571387, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=24.7474747474747, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR013078 - InterPro: IPR015845 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 26028; Mature: 26028
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYE CCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEECCC AQDVNAAESWVSASLAHFSGFDSLIHCAGVFHRTPIRFNDNQQHEIDQLWQVNVMGPWLL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCHHHH SRAAWSQLECHDEARIIVLVSMSGKRSKGRLAGYTVSKFALMGLCQTMRNEGWEQGIRVT HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCEEE AICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSHLLQLPNSCVPFELSMNCTHEI EECCCCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC >Mature Secondary Structure MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYE CCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEECCC AQDVNAAESWVSASLAHFSGFDSLIHCAGVFHRTPIRFNDNQQHEIDQLWQVNVMGPWLL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCCHHHH SRAAWSQLECHDEARIIVLVSMSGKRSKGRLAGYTVSKFALMGLCQTMRNEGWEQGIRVT HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCEEE AICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSHLLQLPNSCVPFELSMNCTHEI EECCCCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1909028 [H]