| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023352
Identifier: 124023352
GI number: 124023352
Start: 1441515
End: 1443113
Strand: Reverse
Name: 124023352
Synonym: P9303_16501
Alternate gene names: NA
Gene position: 1443113-1441515 (Counterclockwise)
Preceding gene: 124023353
Following gene: 124023350
Centisome position: 53.79
GC content: 56.72
Gene sequence:
>1599_bases ATGATCTCCCGACAGCGGCTGCTCCTATGGACCGCCTGCGCGCTGGTGGTCTTGCTCGTCATCGGAGCTCTAGTGCAAGT GGTGAGGAACCTGCTCTGGGATTTGAGTTACTTACTACCTCCCTGGTTGCTAGGCCCGGTGTTTTTCCTAACAGCAGGCC TCATCATCTTGATGATCTATCAAGTTGGATGGCCCTGGTGGAAGGCTTTTAAGCGTCAGAACTTAGAAACTGCTCAAAAC AATCAACGGCCCCTTTCCCCTCCAAGTAGCCGTCATCAAGCAGCCAAGCAAAGTCTTGAAAGCATTGATCGCCTGCTCGA ACGCCTCCAAGACGATGTCACTCGAGAAGGGCTTAAGCAAGAGAGAGAAAGGGTGGCTGATGAACTGGCCCGTGGTGATC TGATGGTGGTGGTGTTCGGTACTGGTTCCAGCGGCAAGACATCTCTGATCCGAGCACTCCTGAACGAAATGGTGGGTGAG GTTGGTGCACCCATGGGATCCACAACCAGTAGCCAGATTTATCGACTGCGTTTAAAGGGACTTGATCGAGGCCTTCAACT GGCTGACACCCCAGGAATTCTTGAAGCAGGCAGAGCCGGTTTAAGCCGAGAGAAGGAAGCAAGGCAACGAGCCAGTAGAG CTGACCTGATGGTGGTGGTTGTGGACTGTGATCTACGCGCTTCAGAGCTGGAGGTCATCAGTAGCCTCGCCAATCTCGGC AAACGATTGCTCCTGGTTCTGAATAAATGCGATCTACGCGGTGAAGAAGAGGAGCGACGGCTTTTGGCGCAGTTGCGAGG GCGATGCAAGGGCTTGCTTGAAGCTGAGGATGTGATCTCCTGTAGCGCTGCACCCCAGTCAGTGCCGCGTCCCGGCAAAC GACCTTTGCAGCCTCCGGCTGAGGTCGACAACCTGCTGCGTCGCCTTGCGTCAGTGCTACACGCCGATGGTGAAGAACTA CTGGCAGACAACATTCTGCTGCAATGTCGCCATCTAGGAGATGCCGGTCGCCAGCTGCTGGATCGACAACGACAACATGA AGCGCGTCAGTGTGTTGATCGTTACAGCTGGATCAGTGGTGGTGTCGTCGCTGCAACCCCCCTCCCAGGAGTGGATCTAT TGGGGACGGCAGCGGTGAATGCCCAAATGGTGATGGAGGTCGCCCGGGTCTATGGAGTTCAACTCACTCGCAACCGAGCA CAAGAACTGGCGGTATCAGTAGGCCGCACTTTGGCAGGACTCGGCATTGTTAAAGGTGGAGTGGCGATCATCGGCACAGC TCTCAGTGTCAACTTGCCCACCCTTTTGCTGGGCCGAGCGGTACAAGGGGTCGCTGCTGCTTGGCTCACACGCGTTGCGG GAGCGAGCTTCATGACCTACTTCCAGCAGGATCAAGACTGGGGGGATGGCGGCATGCAGGAAGTGGTTCAACGTCACTAC GATCTCAACCGACGAGAATCTTCGCTGGAACGTTTTCTCACGACAGCCCTGCGGCGGGTGGTGGAGCCTCTACAGCGGGA GAAACGGCGACAGCTCCCGCCACGCCCAGGGCCTCGGGAGGTGGCGGACGCATCGGACCACGGGCATCCAGAACTGTGA
Upstream 100 bases:
>100_bases TCTCTGGCTCAGCAATGATGCCAACAGTTCCAGACCCCAGACGCTGTCTCTCTGGTCAAAGATCATTCAATCTGCAGGCC AGCGGAAGCATGACAAACAA
Downstream 100 bases:
>100_bases TCAAAGCCAGGTAGAACAATCCAATCGCTACTGATAAAACAGTCGTGATAATCGCCACCCAGCGACCTCGCGGGGGTGAT GAAGCCATTAGCGCAAACCC
Product: GTPase SAR1 and related small G proteins
Products: NA
Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MISRQRLLLWTACALVVLLVIGALVQVVRNLLWDLSYLLPPWLLGPVFFLTAGLIILMIYQVGWPWWKAFKRQNLETAQN NQRPLSPPSSRHQAAKQSLESIDRLLERLQDDVTREGLKQERERVADELARGDLMVVVFGTGSSGKTSLIRALLNEMVGE VGAPMGSTTSSQIYRLRLKGLDRGLQLADTPGILEAGRAGLSREKEARQRASRADLMVVVVDCDLRASELEVISSLANLG KRLLLVLNKCDLRGEEEERRLLAQLRGRCKGLLEAEDVISCSAAPQSVPRPGKRPLQPPAEVDNLLRRLASVLHADGEEL LADNILLQCRHLGDAGRQLLDRQRQHEARQCVDRYSWISGGVVAATPLPGVDLLGTAAVNAQMVMEVARVYGVQLTRNRA QELAVSVGRTLAGLGIVKGGVAIIGTALSVNLPTLLLGRAVQGVAAAWLTRVAGASFMTYFQQDQDWGDGGMQEVVQRHY DLNRRESSLERFLTTALRRVVEPLQREKRRQLPPRPGPREVADASDHGHPEL
Sequences:
>Translated_532_residues MISRQRLLLWTACALVVLLVIGALVQVVRNLLWDLSYLLPPWLLGPVFFLTAGLIILMIYQVGWPWWKAFKRQNLETAQN NQRPLSPPSSRHQAAKQSLESIDRLLERLQDDVTREGLKQERERVADELARGDLMVVVFGTGSSGKTSLIRALLNEMVGE VGAPMGSTTSSQIYRLRLKGLDRGLQLADTPGILEAGRAGLSREKEARQRASRADLMVVVVDCDLRASELEVISSLANLG KRLLLVLNKCDLRGEEEERRLLAQLRGRCKGLLEAEDVISCSAAPQSVPRPGKRPLQPPAEVDNLLRRLASVLHADGEEL LADNILLQCRHLGDAGRQLLDRQRQHEARQCVDRYSWISGGVVAATPLPGVDLLGTAAVNAQMVMEVARVYGVQLTRNRA QELAVSVGRTLAGLGIVKGGVAIIGTALSVNLPTLLLGRAVQGVAAAWLTRVAGASFMTYFQQDQDWGDGGMQEVVQRHY DLNRRESSLERFLTTALRRVVEPLQREKRRQLPPRPGPREVADASDHGHPEL >Mature_532_residues MISRQRLLLWTACALVVLLVIGALVQVVRNLLWDLSYLLPPWLLGPVFFLTAGLIILMIYQVGWPWWKAFKRQNLETAQN NQRPLSPPSSRHQAAKQSLESIDRLLERLQDDVTREGLKQERERVADELARGDLMVVVFGTGSSGKTSLIRALLNEMVGE VGAPMGSTTSSQIYRLRLKGLDRGLQLADTPGILEAGRAGLSREKEARQRASRADLMVVVVDCDLRASELEVISSLANLG KRLLLVLNKCDLRGEEEERRLLAQLRGRCKGLLEAEDVISCSAAPQSVPRPGKRPLQPPAEVDNLLRRLASVLHADGEEL LADNILLQCRHLGDAGRQLLDRQRQHEARQCVDRYSWISGGVVAATPLPGVDLLGTAAVNAQMVMEVARVYGVQLTRNRA QELAVSVGRTLAGLGIVKGGVAIIGTALSVNLPTLLLGRAVQGVAAAWLTRVAGASFMTYFQQDQDWGDGGMQEVVQRHY DLNRRESSLERFLTTALRRVVEPLQREKRRQLPPRPGPREVADASDHGHPEL
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58745; Mature: 58745
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRQRLLLWTACALVVLLVIGALVQVVRNLLWDLSYLLPPWLLGPVFFLTAGLIILMIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QVGWPWWKAFKRQNLETAQNNQRPLSPPSSRHQAAKQSLESIDRLLERLQDDVTREGLKQ HHCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERERVADELARGDLMVVVFGTGSSGKTSLIRALLNEMVGEVGAPMGSTTSSQIYRLRLKG HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LDRGLQLADTPGILEAGRAGLSREKEARQRASRADLMVVVVDCDLRASELEVISSLANLG CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH KRLLLVLNKCDLRGEEEERRLLAQLRGRCKGLLEAEDVISCSAAPQSVPRPGKRPLQPPA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHH EVDNLLRRLASVLHADGEELLADNILLQCRHLGDAGRQLLDRQRQHEARQCVDRYSWISG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GVVAATPLPGVDLLGTAAVNAQMVMEVARVYGVQLTRNRAQELAVSVGRTLAGLGIVKGG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VAIIGTALSVNLPTLLLGRAVQGVAAAWLTRVAGASFMTYFQQDQDWGDGGMQEVVQRHY HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH DLNRRESSLERFLTTALRRVVEPLQREKRRQLPPRPGPREVADASDHGHPEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISRQRLLLWTACALVVLLVIGALVQVVRNLLWDLSYLLPPWLLGPVFFLTAGLIILMIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH QVGWPWWKAFKRQNLETAQNNQRPLSPPSSRHQAAKQSLESIDRLLERLQDDVTREGLKQ HHCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERERVADELARGDLMVVVFGTGSSGKTSLIRALLNEMVGEVGAPMGSTTSSQIYRLRLKG HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LDRGLQLADTPGILEAGRAGLSREKEARQRASRADLMVVVVDCDLRASELEVISSLANLG CCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH KRLLLVLNKCDLRGEEEERRLLAQLRGRCKGLLEAEDVISCSAAPQSVPRPGKRPLQPPA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHH EVDNLLRRLASVLHADGEELLADNILLQCRHLGDAGRQLLDRQRQHEARQCVDRYSWISG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GVVAATPLPGVDLLGTAAVNAQMVMEVARVYGVQLTRNRAQELAVSVGRTLAGLGIVKGG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VAIIGTALSVNLPTLLLGRAVQGVAAAWLTRVAGASFMTYFQQDQDWGDGGMQEVVQRHY HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH DLNRRESSLERFLTTALRRVVEPLQREKRRQLPPRPGPREVADASDHGHPEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA