| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is rsbW
Identifier: 124023337
GI number: 124023337
Start: 1429044
End: 1429538
Strand: Reverse
Name: rsbW
Synonym: P9303_16351
Alternate gene names: NA
Gene position: 1429538-1429044 (Counterclockwise)
Preceding gene: 124023338
Following gene: 124023334
Centisome position: 53.29
GC content: 52.53
Gene sequence:
>495_bases ATGGTCCTGATGCCTTCCTGGTCACGGGCAGCTTCTAGGCTTCTATTCAGCGTTAGCCCCCAGGGGGTGGCCCCGCTGTT TCGTTGGGCTGATTTCATTCTTCCTTCAACCCTGCAGCTCACTCCTTTGCTGGAGATTCTGCTTGAACCTGTTGCCTGTC AGGACACCAGCTATCGCCTACAGCTGGGATTGCAGGAGGCCTTGGTGAATGCAGTGCAACATGGCAATTGCGGAGATCCA GGCAAATCTCTGCGAGTTCGTCGAATCTTTACGCCTAACTGGATGATTTGGCAGATCCAGGATGAAGGGATCGGTGTACC GCTGAATGCTCGAGTTGGTTGCCTTCCAGCTCAACTCGAAGCCAATAGTGGACGTGGAATGTTTCTGATTCATCAGTGTT TTGATGATGTGCGCTGGAGCCAGCGTGGCAATCGCTTGCAGCTTGCTTGTCGACGTCCTAAAGCACTTAACACTGCTGAC AGCGTACAAACTTGA
Upstream 100 bases:
>100_bases GTGTTGCATCATCCATCACTTGTAGCCCGCCGTTAGAGCAGATTTCAGTTTGAGTCTCCGGCCTGGAGCACGCGAACGGT TATGGTCAAAACAGGTCTGA
Downstream 100 bases:
>100_bases ATGCTATCAATCATATGAACTAATAATTAGAAGCGAAGCTGAGATATATTCACCGTCTAATTAATAATCAAGCAAGAACA TGGATCCATTCATTGTTTCA
Product: anti-sigma regulatory factor (Ser/Thr protein kinase)
Products: NA
Alternate protein names: PmgA Protein; Photomixotrophic Growth Related Protein PmgA-Like Protein; Photomixotrophic Growth-Like Protein PmgA; Photomixotrophic Growth Related Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRLQLGLQEALVNAVQHGNCGDP GKSLRVRRIFTPNWMIWQIQDEGIGVPLNARVGCLPAQLEANSGRGMFLIHQCFDDVRWSQRGNRLQLACRRPKALNTAD SVQT
Sequences:
>Translated_164_residues MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRLQLGLQEALVNAVQHGNCGDP GKSLRVRRIFTPNWMIWQIQDEGIGVPLNARVGCLPAQLEANSGRGMFLIHQCFDDVRWSQRGNRLQLACRRPKALNTAD SVQT >Mature_164_residues MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRLQLGLQEALVNAVQHGNCGDP GKSLRVRRIFTPNWMIWQIQDEGIGVPLNARVGCLPAQLEANSGRGMFLIHQCFDDVRWSQRGNRLQLACRRPKALNTAD SVQT
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18339; Mature: 18339
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRL CEECCCHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEE QLGLQEALVNAVQHGNCGDPGKSLRVRRIFTPNWMIWQIQDEGIGVPLNARVGCLPAQLE EECHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEECEEE ANSGRGMFLIHQCFDDVRWSQRGNRLQLACRRPKALNTADSVQT CCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MVLMPSWSRAASRLLFSVSPQGVAPLFRWADFILPSTLQLTPLLEILLEPVACQDTSYRL CEECCCHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEE QLGLQEALVNAVQHGNCGDPGKSLRVRRIFTPNWMIWQIQDEGIGVPLNARVGCLPAQLE EECHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEECEEE ANSGRGMFLIHQCFDDVRWSQRGNRLQLACRRPKALNTADSVQT CCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA