| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023303
Identifier: 124023303
GI number: 124023303
Start: 1405130
End: 1405597
Strand: Reverse
Name: 124023303
Synonym: P9303_16011
Alternate gene names: NA
Gene position: 1405597-1405130 (Counterclockwise)
Preceding gene: 124023304
Following gene: 124023302
Centisome position: 52.4
GC content: 44.02
Gene sequence:
>468_bases ATGATCATGCAAAAACTATTGCTTGCACCGTTAGCAATTATTGCGATTTCGAGCGTTTCATCAACGTCCTTAAATGCACA TGAAAATGCTAAATATAGCAAGGATCTTGGTATTAAGATTGAAACACTTGTGCAAAGCACTAAGCAATGGGATGGAAATT TTCTCCCGCATTATCCAACCAGCAATGCTGAGATCACAGTTCTGCGTATCACGATTCCAGCCGGAGTTAACCTGCCATTG CATACCCACCCAGTCATCAGTGCAGGAGTAATCCTTCAAGGCACGCTTCAGCTAACTCTTCAAGATGGAACGACACGCCT TTTCAATCAGGGAGCTGCGCTGATTGAGACAGTGAATACAGTTCATACCGGAAAAAGTCTTGGTCCAAAAGATACTGTTG TTCTCGTCTTTTATGCAGGTAGCAAGCACCTTCCGACGACTGTTCAGGTGAAAACGCAAGCCCTTTGA
Upstream 100 bases:
>100_bases TATCTTTCTTTATTCTGATCAATTAATGATATTAAAGGTATTTAATTGAAGTGAGGAGGCTAAACTATGATTTATTCTCC TCTCTTCACCCTTTTATTAA
Downstream 100 bases:
>100_bases AAAAGGTTCCTTAGGCAGCGCTTAAAACGTAAAAGTTGGCAGGTGCAACAGAGCAGCTCGATCAAGCACAAGCAATCTTG TAAAGAGGTTGCTACCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein; Cupin Domain Protein; Cupin Domain-Containing Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIMQKLLLAPLAIIAISSVSSTSLNAHENAKYSKDLGIKIETLVQSTKQWDGNFLPHYPTSNAEITVLRITIPAGVNLPL HTHPVISAGVILQGTLQLTLQDGTTRLFNQGAALIETVNTVHTGKSLGPKDTVVLVFYAGSKHLPTTVQVKTQAL
Sequences:
>Translated_155_residues MIMQKLLLAPLAIIAISSVSSTSLNAHENAKYSKDLGIKIETLVQSTKQWDGNFLPHYPTSNAEITVLRITIPAGVNLPL HTHPVISAGVILQGTLQLTLQDGTTRLFNQGAALIETVNTVHTGKSLGPKDTVVLVFYAGSKHLPTTVQVKTQAL >Mature_155_residues MIMQKLLLAPLAIIAISSVSSTSLNAHENAKYSKDLGIKIETLVQSTKQWDGNFLPHYPTSNAEITVLRITIPAGVNLPL HTHPVISAGVILQGTLQLTLQDGTTRLFNQGAALIETVNTVHTGKSLGPKDTVVLVFYAGSKHLPTTVQVKTQAL
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16617; Mature: 16617
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMQKLLLAPLAIIAISSVSSTSLNAHENAKYSKDLGIKIETLVQSTKQWDGNFLPHYPT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC SNAEITVLRITIPAGVNLPLHTHPVISAGVILQGTLQLTLQDGTTRLFNQGAALIETVNT CCCEEEEEEEEECCCCCCCCCCCCCEECCEEEEEEEEEEEECCCHHHHHCCHHHHHHHHH VHTGKSLGPKDTVVLVFYAGSKHLPTTVQVKTQAL HHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MIMQKLLLAPLAIIAISSVSSTSLNAHENAKYSKDLGIKIETLVQSTKQWDGNFLPHYPT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC SNAEITVLRITIPAGVNLPLHTHPVISAGVILQGTLQLTLQDGTTRLFNQGAALIETVNT CCCEEEEEEEEECCCCCCCCCCCCCEECCEEEEEEEEEEEECCCHHHHHCCHHHHHHHHH VHTGKSLGPKDTVVLVFYAGSKHLPTTVQVKTQAL HHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA