| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023300
Identifier: 124023300
GI number: 124023300
Start: 1403721
End: 1404359
Strand: Direct
Name: 124023300
Synonym: P9303_15981
Alternate gene names: NA
Gene position: 1403721-1404359 (Clockwise)
Preceding gene: 124023299
Following gene: 124023301
Centisome position: 52.33
GC content: 44.29
Gene sequence:
>639_bases ATGAGCAACCGCGTCGGTCGGGTCTTTTGTAAAACTAACAAGACAAAAAGATTTGCAATGGCACCAACTCTAAGCAAGCA TCAGAAAGATATTATTCAGAGAGTCAATAAGGAAACCTTCTCTGAATGGCTATCGAGAGGAGATAGGCAAGAGATCAGAG AGTTGATGGAAGAAGTCTGGATCGAATGGCTTTGCAAGGAAGATGATCAGTTCCGTCATCGTTACTATGGGCTTCAATCA CAGGGTGATTGCGAATGGCTCAATATCAGAGAAGAAATCTTAGCTGTGCATGGCCATATTGAGTCTCCAGAAGGAGCATC AGAGCTTCAACAAAAAGCTATTAAAGCCAATGGTATTAAGCACTTGCATGATTGGTTTGTATTTGTAGATGAATGTGTTC ATGAGTATCTGGAAGATCTTGGCTGGGCAAGGGGGCCGGAGGAGAAACCCCTGGATTATTCCCACACCTCTGTTTCTGCT TGGGTTTCCGATCAAGAGGCAAATGAACAACAAGAAAGGCGTCAATGGCTTGGTCAGTTGACCGACATGTTATGGGATTT CAAAGGCTCCTCTCATTGTTATTGGTCTGATCGCATCCTTGCCTTGCGCGATCTGGGTGAACAAAAGTCAGCCATTTGA
Upstream 100 bases:
>100_bases TCAATGGCCGGCTAGAAGTAGCTGAATCCCTAACAATATCTACAAATAAGTCGTCTATGACGTCTTAGCTGGACCTGGCC ACATAGGTTGATTCCATGTT
Downstream 100 bases:
>100_bases TGCACCAAACTTGCCTATCTCTATATACGATTTAAAGGTAATATCTTTAAAGATGAGCAACAACACTATTGCTATACCGG GCAGCCTGATTCATCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSNRVGRVFCKTNKTKRFAMAPTLSKHQKDIIQRVNKETFSEWLSRGDRQEIRELMEEVWIEWLCKEDDQFRHRYYGLQS QGDCEWLNIREEILAVHGHIESPEGASELQQKAIKANGIKHLHDWFVFVDECVHEYLEDLGWARGPEEKPLDYSHTSVSA WVSDQEANEQQERRQWLGQLTDMLWDFKGSSHCYWSDRILALRDLGEQKSAI
Sequences:
>Translated_212_residues MSNRVGRVFCKTNKTKRFAMAPTLSKHQKDIIQRVNKETFSEWLSRGDRQEIRELMEEVWIEWLCKEDDQFRHRYYGLQS QGDCEWLNIREEILAVHGHIESPEGASELQQKAIKANGIKHLHDWFVFVDECVHEYLEDLGWARGPEEKPLDYSHTSVSA WVSDQEANEQQERRQWLGQLTDMLWDFKGSSHCYWSDRILALRDLGEQKSAI >Mature_211_residues SNRVGRVFCKTNKTKRFAMAPTLSKHQKDIIQRVNKETFSEWLSRGDRQEIRELMEEVWIEWLCKEDDQFRHRYYGLQSQ GDCEWLNIREEILAVHGHIESPEGASELQQKAIKANGIKHLHDWFVFVDECVHEYLEDLGWARGPEEKPLDYSHTSVSAW VSDQEANEQQERRQWLGQLTDMLWDFKGSSHCYWSDRILALRDLGEQKSAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25110; Mature: 24979
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRVGRVFCKTNKTKRFAMAPTLSKHQKDIIQRVNKETFSEWLSRGDRQEIRELMEEVW CCCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IEWLCKEDDQFRHRYYGLQSQGDCEWLNIREEILAVHGHIESPEGASELQQKAIKANGIK HHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHH HLHDWFVFVDECVHEYLEDLGWARGPEEKPLDYSHTSVSAWVSDQEANEQQERRQWLGQL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHCCHHHHHHHHHHHH TDMLWDFKGSSHCYWSDRILALRDLGEQKSAI HHHHHHCCCCCCEEECCHHHHHHHCCHHCCCC >Mature Secondary Structure SNRVGRVFCKTNKTKRFAMAPTLSKHQKDIIQRVNKETFSEWLSRGDRQEIRELMEEVW CCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IEWLCKEDDQFRHRYYGLQSQGDCEWLNIREEILAVHGHIESPEGASELQQKAIKANGIK HHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHH HLHDWFVFVDECVHEYLEDLGWARGPEEKPLDYSHTSVSAWVSDQEANEQQERRQWLGQL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHCCHHHHHHHHHHHH TDMLWDFKGSSHCYWSDRILALRDLGEQKSAI HHHHHHCCCCCCEEECCHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA