| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023295
Identifier: 124023295
GI number: 124023295
Start: 1399599
End: 1400444
Strand: Reverse
Name: 124023295
Synonym: P9303_15931
Alternate gene names: NA
Gene position: 1400444-1399599 (Counterclockwise)
Preceding gene: 124023298
Following gene: 124023294
Centisome position: 52.2
GC content: 36.17
Gene sequence:
>846_bases ATGGATAGATGGGTATTTGACACTTTTACCTTATATGACCATGACTATATGGATCAGAAATATGTTGAGACTTTGTCAAA GTATAACTACAAAATATTTGCCAATTGGGCATGCCTTTATCAAGACGAATTGAATACACCGCTTGAAGCAGATATACGCA TCATTGTATTAGGCGGCTCAACAACTTCAGCAATTCTTGAGAGCACCTGGTCATATCACTTGTACCGTGAACTTTCTCAA TTCACTACAAATCTAGCTATACTCAATGGTGGATGCGGCACCTATAATAGTTTTAGTGAATTTATGAAACTTAATCGAGA TATTTCTTCGATAAATCCCACACATGTTCTATCTCTAAGTGGTGTCAATGATACAGTCGTGCCTAATAAAATAAGTAACG GCTTTGCCAAGATGCTTATAGAACCTTTGGTGAAAGGAAATCTTTTTACTAGGTTTAATGATTGCATTCCGGAAGTCGCA CGTCCAATTAGATGGATTGAGGAGACATTGCATATGAATTCTATATGCAATAACTACAATGCAGATTTTATGCGCTTCTT ACAACCATGTTTGGGATCTCCTTGTAATCCTACCAGCAGCATGTCTCCAGTGTTATTAGACATGATTATAAATAGTAGAA GGATGTTCGGAGAACAATATGTTGAATATGTAGACTATTTCTATAGAACTATTGTATCCAGTCAGTTACCTTCTTGCATT AAAAATATTTCTGCACTCCTGCCTAATCACGAAGATCTCTGGCAGGATTCAAGACATCCTAGTGATAAAGGCTACCTATT AATTGCTCAAGAAATAATGAAAACAATAAAGCCTTCATTGACATGA
Upstream 100 bases:
>100_bases AAGATAGATTGCAATACCATAGATCATATGGCCTGTATGAATTATAATAGTAACAAACTAATGAGCATTATGATCAACCG CAATCTCTGCATTTATATTA
Downstream 100 bases:
>100_bases TACTTTCTAAAACATTTCCAAAATATTCGCATTATTTTACAAGATTTTTGATTAGTTTCATGAGATTAGATAAGGATCAG CATACTACAATCGTACACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MDRWVFDTFTLYDHDYMDQKYVETLSKYNYKIFANWACLYQDELNTPLEADIRIIVLGGSTTSAILESTWSYHLYRELSQ FTTNLAILNGGCGTYNSFSEFMKLNRDISSINPTHVLSLSGVNDTVVPNKISNGFAKMLIEPLVKGNLFTRFNDCIPEVA RPIRWIEETLHMNSICNNYNADFMRFLQPCLGSPCNPTSSMSPVLLDMIINSRRMFGEQYVEYVDYFYRTIVSSQLPSCI KNISALLPNHEDLWQDSRHPSDKGYLLIAQEIMKTIKPSLT
Sequences:
>Translated_281_residues MDRWVFDTFTLYDHDYMDQKYVETLSKYNYKIFANWACLYQDELNTPLEADIRIIVLGGSTTSAILESTWSYHLYRELSQ FTTNLAILNGGCGTYNSFSEFMKLNRDISSINPTHVLSLSGVNDTVVPNKISNGFAKMLIEPLVKGNLFTRFNDCIPEVA RPIRWIEETLHMNSICNNYNADFMRFLQPCLGSPCNPTSSMSPVLLDMIINSRRMFGEQYVEYVDYFYRTIVSSQLPSCI KNISALLPNHEDLWQDSRHPSDKGYLLIAQEIMKTIKPSLT >Mature_281_residues MDRWVFDTFTLYDHDYMDQKYVETLSKYNYKIFANWACLYQDELNTPLEADIRIIVLGGSTTSAILESTWSYHLYRELSQ FTTNLAILNGGCGTYNSFSEFMKLNRDISSINPTHVLSLSGVNDTVVPNKISNGFAKMLIEPLVKGNLFTRFNDCIPEVA RPIRWIEETLHMNSICNNYNADFMRFLQPCLGSPCNPTSSMSPVLLDMIINSRRMFGEQYVEYVDYFYRTIVSSQLPSCI KNISALLPNHEDLWQDSRHPSDKGYLLIAQEIMKTIKPSLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32363; Mature: 32363
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRWVFDTFTLYDHDYMDQKYVETLSKYNYKIFANWACLYQDELNTPLEADIRIIVLGGS CCCEEEEEEECCCCHHCHHHHHHHHHHCCEEEEEEEEEEEHHHCCCCCCCCEEEEEECCC TTSAILESTWSYHLYRELSQFTTNLAILNGGCGTYNSFSEFMKLNRDISSINPTHVLSLS HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCHHHCCCCCEEEEEC GVNDTVVPNKISNGFAKMLIEPLVKGNLFTRFNDCIPEVARPIRWIEETLHMNSICNNYN CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADFMRFLQPCLGSPCNPTSSMSPVLLDMIINSRRMFGEQYVEYVDYFYRTIVSSQLPSCI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNISALLPNHEDLWQDSRHPSDKGYLLIAQEIMKTIKPSLT HHHHHHCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCC >Mature Secondary Structure MDRWVFDTFTLYDHDYMDQKYVETLSKYNYKIFANWACLYQDELNTPLEADIRIIVLGGS CCCEEEEEEECCCCHHCHHHHHHHHHHCCEEEEEEEEEEEHHHCCCCCCCCEEEEEECCC TTSAILESTWSYHLYRELSQFTTNLAILNGGCGTYNSFSEFMKLNRDISSINPTHVLSLS HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCHHHCCCCCEEEEEC GVNDTVVPNKISNGFAKMLIEPLVKGNLFTRFNDCIPEVARPIRWIEETLHMNSICNNYN CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADFMRFLQPCLGSPCNPTSSMSPVLLDMIINSRRMFGEQYVEYVDYFYRTIVSSQLPSCI HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNISALLPNHEDLWQDSRHPSDKGYLLIAQEIMKTIKPSLT HHHHHHCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA