| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023292
Identifier: 124023292
GI number: 124023292
Start: 1394398
End: 1395225
Strand: Direct
Name: 124023292
Synonym: P9303_15901
Alternate gene names: NA
Gene position: 1394398-1395225 (Clockwise)
Preceding gene: 124023289
Following gene: 124023293
Centisome position: 51.98
GC content: 54.23
Gene sequence:
>828_bases ATGGATTCAAAAGCCGTGAAACTCTCCTCCTTTGGAGTTGCTGCTGTGGTGGCTTCCTTTGTGTTTGTTCCAGTAGCCGC CTGGGCTGGCCCAACGGTTTCTGTACCCGACTTTAAAAACCAGGTGGGAAGGTTGTCTTGGTGGAGCCCGCGTGTGAGCC GTCAGCTCGCGGATGCTCTTTCCAATGAACTAGCCCTTGCTGGTGGACTAACTGTCGTGGAACGGCAGAATCTCAAGGCC GTCCTCTCTGAGCAAGAGCTTGCCGAGTTGGGGATTGTGCGAAACGACGGAGACGCCGCACGTAGCCGTCAAATGCGTGG CGCCCGCTATTTGATTATGGGGCGTGTGAGTGGCTACGAGGATGGGGTTGAAACAAAGCAATCTGGAAGTGGGATGCGCT TTATGGGTTTTGGAGGCTCGAAGACTGTTTCGGAATCCAAGGCTTATGTTTCCATCGACCTACGGGTGGTGGATTCCTCC ACTGGAGAGGTTGTCGGTGCGCGAACAGTAGAGGGGCGTGCGACCAGCACAGCTAAGCAGAAAGGCTCCGGCGGATCTTT GGCTCCCTTGGCTGGGATTGTAGGAGGTGCAACCGGTGCAAGAGGGGCAGGGGCCTATGGCCTTGCGGCTGCAGGCACTT TTAGTTATGAAGAATCATCCAGCGAAAGTAATCGCACTCCCGCAGCAAAAGCCATTCGCGCAGCTCTCATAGATGGTGCT GATTATGTGAATTGCCTATTGGTGATTCGTGATGGCTGTTTGGCGTCTTATCAGCAGCAGGAAGCAATTCGACGCTCTAA TACACGTGATGTGCTGCAACTCGATTGA
Upstream 100 bases:
>100_bases GCCATGACGTTCCAAATTGGTGATGGCAAGTCGCGTTGCTTTACGAGAAGCAACCCACTCTCCTAATTCTTTTTAAATTG CCGGACTGTAGAAATCTCTA
Downstream 100 bases:
>100_bases TGTCGATCAAAGTTTTGTCGTTTTGCGGCAAGGCTGATTACGCCGTTTGCGCTGCCAATACAGAGAGGACGATTTTGAAG AGGTTTTGAGTTCTTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDSKAVKLSSFGVAAVVASFVFVPVAAWAGPTVSVPDFKNQVGRLSWWSPRVSRQLADALSNELALAGGLTVVERQNLKA VLSEQELAELGIVRNDGDAARSRQMRGARYLIMGRVSGYEDGVETKQSGSGMRFMGFGGSKTVSESKAYVSIDLRVVDSS TGEVVGARTVEGRATSTAKQKGSGGSLAPLAGIVGGATGARGAGAYGLAAAGTFSYEESSSESNRTPAAKAIRAALIDGA DYVNCLLVIRDGCLASYQQQEAIRRSNTRDVLQLD
Sequences:
>Translated_275_residues MDSKAVKLSSFGVAAVVASFVFVPVAAWAGPTVSVPDFKNQVGRLSWWSPRVSRQLADALSNELALAGGLTVVERQNLKA VLSEQELAELGIVRNDGDAARSRQMRGARYLIMGRVSGYEDGVETKQSGSGMRFMGFGGSKTVSESKAYVSIDLRVVDSS TGEVVGARTVEGRATSTAKQKGSGGSLAPLAGIVGGATGARGAGAYGLAAAGTFSYEESSSESNRTPAAKAIRAALIDGA DYVNCLLVIRDGCLASYQQQEAIRRSNTRDVLQLD >Mature_275_residues MDSKAVKLSSFGVAAVVASFVFVPVAAWAGPTVSVPDFKNQVGRLSWWSPRVSRQLADALSNELALAGGLTVVERQNLKA VLSEQELAELGIVRNDGDAARSRQMRGARYLIMGRVSGYEDGVETKQSGSGMRFMGFGGSKTVSESKAYVSIDLRVVDSS TGEVVGARTVEGRATSTAKQKGSGGSLAPLAGIVGGATGARGAGAYGLAAAGTFSYEESSSESNRTPAAKAIRAALIDGA DYVNCLLVIRDGCLASYQQQEAIRRSNTRDVLQLD
Specific function: Unknown
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28720; Mature: 28720
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKAVKLSSFGVAAVVASFVFVPVAAWAGPTVSVPDFKNQVGRLSWWSPRVSRQLADAL CCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH SNELALAGGLTVVERQNLKAVLSEQELAELGIVRNDGDAARSRQMRGARYLIMGRVSGYE HHCEEHHCCEEEEEHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCCCEEEEEEECCCCC DGVETKQSGSGMRFMGFGGSKTVSESKAYVSIDLRVVDSSTGEVVGARTVEGRATSTAKQ CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHH KGSGGSLAPLAGIVGGATGARGAGAYGLAAAGTFSYEESSSESNRTPAAKAIRAALIDGA CCCCCCHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH DYVNCLLVIRDGCLASYQQQEAIRRSNTRDVLQLD HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MDSKAVKLSSFGVAAVVASFVFVPVAAWAGPTVSVPDFKNQVGRLSWWSPRVSRQLADAL CCCCEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH SNELALAGGLTVVERQNLKAVLSEQELAELGIVRNDGDAARSRQMRGARYLIMGRVSGYE HHCEEHHCCEEEEEHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCCCEEEEEEECCCCC DGVETKQSGSGMRFMGFGGSKTVSESKAYVSIDLRVVDSSTGEVVGARTVEGRATSTAKQ CCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCHHHHH KGSGGSLAPLAGIVGGATGARGAGAYGLAAAGTFSYEESSSESNRTPAAKAIRAALIDGA CCCCCCHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCH DYVNCLLVIRDGCLASYQQQEAIRRSNTRDVLQLD HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA