Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023286

Identifier: 124023286

GI number: 124023286

Start: 1390091

End: 1390576

Strand: Reverse

Name: 124023286

Synonym: P9303_15841

Alternate gene names: NA

Gene position: 1390576-1390091 (Counterclockwise)

Preceding gene: 124023287

Following gene: 124023277

Centisome position: 51.84

GC content: 51.65

Gene sequence:

>486_bases
ATGGCCGAACGAAGCAAAGCTATGCCTTTCGGGCCTGACAAGAGCGGAACGGCCAACAAAAGCCTGCCCCAAAAGGGATC
CAAATCGCCACAGATCAAGAAAGCAAAAGCGACCTCCAGCAGTCAGCAGGCCATTCCCAAGCCGGTGGCCAATCGCATGC
TGCGGCGCGTGATCTTTGCCTCGGGTCTTCCTACTGCTGCAGGGATGGGTGTTTTTGTAGCTAGTTATCTGATTGTGAGC
CGAGGCATTGCTGATATCTCACCATTCATCACGCTGATTACTTCAGGAGCTTGCTTCCTCGTTGGCTTGATAGGACTGAG
TTATGGGGTTCTATCTGCCAGCTGGGAAGATGCCCCAGGCAGCCTGCTTGGACTGGAACACATTGGTCGCAACATAGGAA
GAATGCGCGATTCAAGGAAAGCTAATCAACCAGACTCAAAATCAGAGACCAAGCCAAAGGAATCCGGACAAACATCAGAC
AAATAG

Upstream 100 bases:

>100_bases
TGAACAGCGCTACAACGGCCTGATCACCAAACTAGGCATCCGCGGTTAAATCCCTTTTGGCGATTTCCCTCTTGGCGATT
TCCCTCTAATTTTTAAGCAG

Downstream 100 bases:

>100_bases
TCGGTCGCTGCATCGAGCTTTGAATTCCTGCTGTTGAAGGGAACTGAGTGCAGCAGAAGCGTCACGAACGCAGAACTGAT
GACCTAGACATACGTAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAERSKAMPFGPDKSGTANKSLPQKGSKSPQIKKAKATSSSQQAIPKPVANRMLRRVIFASGLPTAAGMGVFVASYLIVS
RGIADISPFITLITSGACFLVGLIGLSYGVLSASWEDAPGSLLGLEHIGRNIGRMRDSRKANQPDSKSETKPKESGQTSD
K

Sequences:

>Translated_161_residues
MAERSKAMPFGPDKSGTANKSLPQKGSKSPQIKKAKATSSSQQAIPKPVANRMLRRVIFASGLPTAAGMGVFVASYLIVS
RGIADISPFITLITSGACFLVGLIGLSYGVLSASWEDAPGSLLGLEHIGRNIGRMRDSRKANQPDSKSETKPKESGQTSD
K
>Mature_160_residues
AERSKAMPFGPDKSGTANKSLPQKGSKSPQIKKAKATSSSQQAIPKPVANRMLRRVIFASGLPTAAGMGVFVASYLIVSR
GIADISPFITLITSGACFLVGLIGLSYGVLSASWEDAPGSLLGLEHIGRNIGRMRDSRKANQPDSKSETKPKESGQTSDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16963; Mature: 16832

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERSKAMPFGPDKSGTANKSLPQKGSKSPQIKKAKATSSSQQAIPKPVANRMLRRVIFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHH
SGLPTAAGMGVFVASYLIVSRGIADISPFITLITSGACFLVGLIGLSYGVLSASWEDAPG
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SLLGLEHIGRNIGRMRDSRKANQPDSKSETKPKESGQTSDK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AERSKAMPFGPDKSGTANKSLPQKGSKSPQIKKAKATSSSQQAIPKPVANRMLRRVIFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHH
SGLPTAAGMGVFVASYLIVSRGIADISPFITLITSGACFLVGLIGLSYGVLSASWEDAPG
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SLLGLEHIGRNIGRMRDSRKANQPDSKSETKPKESGQTSDK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA