| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023272
Identifier: 124023272
GI number: 124023272
Start: 1371363
End: 1371995
Strand: Reverse
Name: 124023272
Synonym: P9303_15701
Alternate gene names: NA
Gene position: 1371995-1371363 (Counterclockwise)
Preceding gene: 124023273
Following gene: 124023271
Centisome position: 51.14
GC content: 33.65
Gene sequence:
>633_bases ATGTTAAATTACAAAAATAATGCTATAGAAGAAGCATCACAGTTAGTCAATAAAGTCATTGATGATGCCCCGAAAAATGA AGATACTCGTTATGAATCACGACTTATCGCTTTTTGCCTGAATCACATAGGTCAAGAATTCGAAGGGGTTCGTTATACAC CAGGTGCAGACATACAAAGACTTCTAGATATCAACGGTATAAACCACCGACAGGTATCTTTGCAAAATATAGGTCTAAGC AATCAATTTCCATTACTAATAGCATATTCAAATGATACTAATACACCCTTAATTATTTATGAGCAGTCAAATCAGACATA TGTATATTTACCAGAGGACGATAGATCTGAATTGATTACGAACATAGATAATATTCAAGATTTTGGCTATGAAATCTATG CTTCAATGCCATCCAAGGTAGAAAATATATTTAAGATATTGAACTTTACATTCAGACCAGAACTCTCTGCCGGTTTCGCG CTAATTGCAACTTCAGCTATCGTTATGTTGTTTAATTTGTCAATTCCAATATTTACTCAATTATTAGTTAGTAGAGTACT TCCAAATAATGACGTACAACTTCTATTAGAGGGTCTATATATCGTAATGATCGTCGTTATGGTTCAAGCCTAG
Upstream 100 bases:
>100_bases AAAGGTGTAATTGTTGAACAGGGCAATCCAAAATCATTATTAGCAAAAGAAAGTATATTTAAGCAGTTTGCAGATTCGGA ACAAAAAGTGGAGGCTTAGG
Downstream 100 bases:
>100_bases CTCAATATCTTCAATTACGTATGACGTTGAGACTTGAAAGTGTAACAGATCTACGACTACAAACAGCATTATGGGATCGT GTAATGAAGATTCCGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLNYKNNAIEEASQLVNKVIDDAPKNEDTRYESRLIAFCLNHIGQEFEGVRYTPGADIQRLLDINGINHRQVSLQNIGLS NQFPLLIAYSNDTNTPLIIYEQSNQTYVYLPEDDRSELITNIDNIQDFGYEIYASMPSKVENIFKILNFTFRPELSAGFA LIATSAIVMLFNLSIPIFTQLLVSRVLPNNDVQLLLEGLYIVMIVVMVQA
Sequences:
>Translated_210_residues MLNYKNNAIEEASQLVNKVIDDAPKNEDTRYESRLIAFCLNHIGQEFEGVRYTPGADIQRLLDINGINHRQVSLQNIGLS NQFPLLIAYSNDTNTPLIIYEQSNQTYVYLPEDDRSELITNIDNIQDFGYEIYASMPSKVENIFKILNFTFRPELSAGFA LIATSAIVMLFNLSIPIFTQLLVSRVLPNNDVQLLLEGLYIVMIVVMVQA >Mature_210_residues MLNYKNNAIEEASQLVNKVIDDAPKNEDTRYESRLIAFCLNHIGQEFEGVRYTPGADIQRLLDINGINHRQVSLQNIGLS NQFPLLIAYSNDTNTPLIIYEQSNQTYVYLPEDDRSELITNIDNIQDFGYEIYASMPSKVENIFKILNFTFRPELSAGFA LIATSAIVMLFNLSIPIFTQLLVSRVLPNNDVQLLLEGLYIVMIVVMVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23855; Mature: 23855
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNYKNNAIEEASQLVNKVIDDAPKNEDTRYESRLIAFCLNHIGQEFEGVRYTPGADIQR CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LLDINGINHRQVSLQNIGLSNQFPLLIAYSNDTNTPLIIYEQSNQTYVYLPEDDRSELIT HHHCCCCCCCEEEHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHH NIDNIQDFGYEIYASMPSKVENIFKILNFTFRPELSAGFALIATSAIVMLFNLSIPIFTQ HHHHHHHHCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH LLVSRVLPNNDVQLLLEGLYIVMIVVMVQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNYKNNAIEEASQLVNKVIDDAPKNEDTRYESRLIAFCLNHIGQEFEGVRYTPGADIQR CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LLDINGINHRQVSLQNIGLSNQFPLLIAYSNDTNTPLIIYEQSNQTYVYLPEDDRSELIT HHHCCCCCCCEEEHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHH NIDNIQDFGYEIYASMPSKVENIFKILNFTFRPELSAGFALIATSAIVMLFNLSIPIFTQ HHHHHHHHCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH LLVSRVLPNNDVQLLLEGLYIVMIVVMVQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA