| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is pykF [H]
Identifier: 124023245
GI number: 124023245
Start: 1344316
End: 1346133
Strand: Direct
Name: pykF [H]
Synonym: P9303_15431
Alternate gene names: 124023245
Gene position: 1344316-1346133 (Clockwise)
Preceding gene: 124023242
Following gene: 124023246
Centisome position: 50.11
GC content: 51.87
Gene sequence:
>1818_bases ATGGTAGTTTCCGCGATGTTTCAGGTCCCGTTGATGGCCCAGATCGATCTGACACGACGGACCAAAATCGTTGCCACCAT AGGTCCGGCAACCGAGACCGCCGAACGAATCCGAGAACTCGTTCAGGTAGGTGCTACCACCTTCCGGCTGAATTTCTCAC ACGGCGACCATGACGAGCACGCCAAGCGCATCTCCACCATCCGCCAGGTCTCTGATGAATTGGGGATGCACATTGGCATT CTTCAAGACTTGCAAGGCCCCAAAATTCGCCTGGGTCGTTTTGATAAGGGGCCTATCACTTTGGCCAATGGCGATCCCTT CGCACTGACCTCAAAACAAGTTCAATGCAATCAGTCAGTGGCAACCGTCACTTACGAAAAGCTTGCAGACGAAGTCACGA CCGGCAGTCGAATCTTGCTTGATGACGGTCGAGTGGAGATGAAAGTCGTAAAAATCGATCAAAGCGAACAAACCTTGCAC TGCATCGTCACAGTGGGAGGGGTGCTCTCAAATAACAAGGGAGTGAATTTCCCTGATGTACAGCTATCGGTTCGCGCCCT TACAGAGAAAGATCGCCAAGATCTCGCCTTTGGCCTCCAGCAAGGGGTGGACTGGGTCGCACTGAGCTTTGTGCGAAACC CTTCGGACATGAAAGAGATCCGCAAACTCATCGGGGATCATGGGCACAGCACCCCAGTGATCGCGAAGATCGAGAAATTT GAGGCGATTGATCAAATCGATTCAATCCTTCCTCTCTGTGATGGAGTCATGGTTGCAAGGGGGGACCTAGGCGTTGAGAT GCCAGCCGAAGAGGTGCCTCTACTGCAAAAGGATTTGATTCGCAAGGCCAACAGCCTTGGAATTCCAATCATCACAGCCA CCCAGATGCTCGACTCGATGGCCTCGAGCCCGAGGCCCACCAGAGCAGAAGTGAGTGATGTAGCAAATGCGATCCTTGAT GGTACTGATGCAGTGATGCTCTCGAACGAAACCGCTGTAGGAGACTATCCAGTGGAGGCGGTTCAAACGATGGCCACCAT TGCCAGACGGATTGAACGGGACTATCCACAGCGTCCAATCGAAACTTATCTTGCCAGCACCATTTCCAACGCGATTAGTT CAGCCGTAAGCAGCATCGCCAGTCATCTCAACGCGGCAGCAATCGTGCCACTAACTGAAAGTGGTGCCACTGCCCACAAC GTCAGCAAATTCCGCCCAGCAGCGCCAATTTTGGCCGTCACCAACGAAGTGGCTGTAGCAAGAAAACTTCAATTGGCATG GGGTGTCACCCCACTGCTTGTCCCAACCCAGAAAAGCACCACTGCAACCTTCAGTGCTGCAATTGCTGTTGCCCAGGAAT TGGGTCTTCTCAAAGAAGGAGATCTAACAATTCAAACTGCAGGAACCCTTGCTGGCGTGAGCGGGTCCACAGATCTTGTC AAAGTAGGAATTGTCAGTGCAGTGCTTGGCCAAGGGATCGGTATTGGCAATGGCACCGTTAGCGGCAAGGTCAGATTTGC TTTCTCCCCAAACGACTCAACAAAAATTGAACCAGGGGAGATTCTGGTCATTCATGAAACAAGCGATGACTATCTCGATG CAATCAGAAAGTCTGCAGGAGTGATTACAGAACAAGAAGGAGAGGAATCCCACGCAGCCGTGATCTCAAAACGCCTAGGG ATTCCGTTCATCATTGGGATAGCACATGCCACGAGAAACCTGCTTGAAGGAGAGGTGGTAACAATGCAGCTCAGTAATGG CAAAGTTCATCGCGGCACAGGCGGCAAGCTGCCAATGAAGCTCGACTCAATGCTTTGA
Upstream 100 bases:
>100_bases ATTCGGATAGCTGGCCGTAGCTCGAGCTCCATCCTGGTAATGATTAATGTCCATAGAAAAACATTGGCAACGCTGTCAAC AACTACGTGTTGAGGCCTGG
Downstream 100 bases:
>100_bases GGGTTCATGAATAGCTCCCTTCCGCTCATCGAAACGGTGAGCATGGCGTTCTCAACCCTTAAAGCCAATCGCCTACGTAG TCTCCTGACAATGCTCGGCA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 2 [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MVVSAMFQVPLMAQIDLTRRTKIVATIGPATETAERIRELVQVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI LQDLQGPKIRLGRFDKGPITLANGDPFALTSKQVQCNQSVATVTYEKLADEVTTGSRILLDDGRVEMKVVKIDQSEQTLH CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIGDHGHSTPVIAKIEKF EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN VSKFRPAAPILAVTNEVAVARKLQLAWGVTPLLVPTQKSTTATFSAAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEESHAAVISKRLG IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSML
Sequences:
>Translated_605_residues MVVSAMFQVPLMAQIDLTRRTKIVATIGPATETAERIRELVQVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI LQDLQGPKIRLGRFDKGPITLANGDPFALTSKQVQCNQSVATVTYEKLADEVTTGSRILLDDGRVEMKVVKIDQSEQTLH CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIGDHGHSTPVIAKIEKF EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN VSKFRPAAPILAVTNEVAVARKLQLAWGVTPLLVPTQKSTTATFSAAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEESHAAVISKRLG IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSML >Mature_605_residues MVVSAMFQVPLMAQIDLTRRTKIVATIGPATETAERIRELVQVGATTFRLNFSHGDHDEHAKRISTIRQVSDELGMHIGI LQDLQGPKIRLGRFDKGPITLANGDPFALTSKQVQCNQSVATVTYEKLADEVTTGSRILLDDGRVEMKVVKIDQSEQTLH CIVTVGGVLSNNKGVNFPDVQLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIGDHGHSTPVIAKIEKF EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSMASSPRPTRAEVSDVANAILD GTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPIETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHN VSKFRPAAPILAVTNEVAVARKLQLAWGVTPLLVPTQKSTTATFSAAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAGVITEQEGEESHAAVISKRLG IPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMKLDSML
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=502, Percent_Identity=39.4422310756972, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI33286420, Length=502, Percent_Identity=39.4422310756972, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI33286418, Length=502, Percent_Identity=39.0438247011952, Blast_Score=327, Evalue=3e-89, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=40, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=40, Blast_Score=325, Evalue=1e-88, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=38.2758620689655, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=38.2758620689655, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI310128736, Length=251, Percent_Identity=33.4661354581673, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI310128734, Length=251, Percent_Identity=33.4661354581673, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI310128738, Length=217, Percent_Identity=33.1797235023041, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1787965, Length=473, Percent_Identity=43.7632135306554, Blast_Score=353, Evalue=2e-98, Organism=Escherichia coli, GI1788160, Length=474, Percent_Identity=40.7172995780591, Blast_Score=325, Evalue=4e-90, Organism=Escherichia coli, GI1787994, Length=100, Percent_Identity=32, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17544584, Length=436, Percent_Identity=41.0550458715596, Blast_Score=322, Evalue=5e-88, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=40.9465020576132, Blast_Score=318, Evalue=6e-87, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=40.9465020576132, Blast_Score=318, Evalue=7e-87, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=40.9465020576132, Blast_Score=317, Evalue=8e-87, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=40.9465020576132, Blast_Score=317, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6319279, Length=479, Percent_Identity=38.6221294363257, Blast_Score=300, Evalue=3e-82, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=36.9387755102041, Blast_Score=286, Evalue=5e-78, Organism=Drosophila melanogaster, GI24648964, Length=500, Percent_Identity=38.2, Blast_Score=319, Evalue=3e-87, Organism=Drosophila melanogaster, GI28571814, Length=500, Percent_Identity=38.2, Blast_Score=319, Evalue=4e-87, Organism=Drosophila melanogaster, GI24648966, Length=411, Percent_Identity=41.3625304136253, Blast_Score=298, Evalue=1e-80, Organism=Drosophila melanogaster, GI24581235, Length=502, Percent_Identity=33.6653386454183, Blast_Score=273, Evalue=3e-73, Organism=Drosophila melanogaster, GI24646914, Length=269, Percent_Identity=42.3791821561338, Blast_Score=194, Evalue=1e-49,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 64593; Mature: 64593
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSAMFQVPLMAQIDLTRRTKIVATIGPATETAERIRELVQVGATTFRLNFSHGDHDEH CEEECCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH AKRISTIRQVSDELGMHIGILQDLQGPKIRLGRFDKGPITLANGDPFALTSKQVQCNQSV HHHHHHHHHHHHHHCCEEEHHHHCCCCCEEECCCCCCCEEEECCCCCEEECCHHCCCCCH ATVTYEKLADEVTTGSRILLDDGRVEMKVVKIDQSEQTLHCIVTVGGVLSNNKGVNFPDV HHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCEEECCCCCCCCCC QLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIGDHGHSTPVIAKIEKF EEEHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHH EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSM HHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHH ASSPRPTRAEVSDVANAILDGTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPI HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH ETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHNVSKFRPAAPILAVTNEVAVA HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEHHHHHHH RKLQLAWGVTPLLVPTQKSTTATFSAAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCEECCCEEEEECCCEECCCCCCCHH KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAG HHHHHHHHHHCCCCCCCCEECCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC VITEQEGEESHAAVISKRLGIPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMK CCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCH LDSML HHCCC >Mature Secondary Structure MVVSAMFQVPLMAQIDLTRRTKIVATIGPATETAERIRELVQVGATTFRLNFSHGDHDEH CEEECCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH AKRISTIRQVSDELGMHIGILQDLQGPKIRLGRFDKGPITLANGDPFALTSKQVQCNQSV HHHHHHHHHHHHHHCCEEEHHHHCCCCCEEECCCCCCCEEEECCCCCEEECCHHCCCCCH ATVTYEKLADEVTTGSRILLDDGRVEMKVVKIDQSEQTLHCIVTVGGVLSNNKGVNFPDV HHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCEEECCCCCCCCCC QLSVRALTEKDRQDLAFGLQQGVDWVALSFVRNPSDMKEIRKLIGDHGHSTPVIAKIEKF EEEHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHH EAIDQIDSILPLCDGVMVARGDLGVEMPAEEVPLLQKDLIRKANSLGIPIITATQMLDSM HHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHH ASSPRPTRAEVSDVANAILDGTDAVMLSNETAVGDYPVEAVQTMATIARRIERDYPQRPI HCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH ETYLASTISNAISSAVSSIASHLNAAAIVPLTESGATAHNVSKFRPAAPILAVTNEVAVA HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEHHHHHHH RKLQLAWGVTPLLVPTQKSTTATFSAAIAVAQELGLLKEGDLTIQTAGTLAGVSGSTDLV HHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCEECCCEEEEECCCEECCCCCCCHH KVGIVSAVLGQGIGIGNGTVSGKVRFAFSPNDSTKIEPGEILVIHETSDDYLDAIRKSAG HHHHHHHHHHCCCCCCCCEECCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC VITEQEGEESHAAVISKRLGIPFIIGIAHATRNLLEGEVVTMQLSNGKVHRGTGGKLPMK CCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCH LDSML HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]