Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023190

Identifier: 124023190

GI number: 124023190

Start: 1284469

End: 1285296

Strand: Reverse

Name: 124023190

Synonym: P9303_14861

Alternate gene names: NA

Gene position: 1285296-1284469 (Counterclockwise)

Preceding gene: 124023191

Following gene: 124023189

Centisome position: 47.91

GC content: 44.32

Gene sequence:

>828_bases
ATGCAGCTCCTTCTTGAGGGTGGAAAGCCAATACGAGATGACAAATCAGTTTCAACGAATGCAAAGACCGTTTCGTCGCA
ACCAACACCGTATTTTGCTTCTCAATCCTCTCAGGATGTCAATTCATTGTCTTTGGAGTTAAGGGTTGGTCTGATTAGTC
AAAGTCCACCAATACAAATCAAATTAAAGGATTCAGGTTTTTGTAAATTTCACTCAGGGAGGATGATTAATGAGTATACT
CTCAATAACATGTTGAAGATAAAGAACAAGCAGATTGCTGATGTCAAATGTGTTGCCACAGACAGTAGCGGCATCCATGT
TAACAATCAGGTTTATAGATCTAAAGTTTATTTAGTTAACCGTGGCAATGGCTGGATTGCAGTTAACCAACTATCACTTG
AGGATTATGTCGCTTCTGTTGTTGGTGCTGAAATGCCTAGTCTTTGGAATATGGAGGCACTTAAAGCCCAGGCGGTTGCT
GCACGTTCTTATGCGCTTGCACATATCGCAAGACCTGCGAACAAGGATTTCGATCTGGGTGACACTACACGTTGGCAGGC
CTATCGAGGGATTTCAAGCCAAACATCACGCTCTACGCAAGCAACTCAGGCCACCAAGGGAATTGTTCTTCGTTACAAGG
GAGGAATTGTTGAAAGCCTTTATGCGTCAACGGCAGATATCAGTTTGCAAGCTCATGGCCACCTAGGAGCGAGCATGAGC
CAGCATGGGGCCCAGCAATTGGCACGTCGTGGTTTGAAGTTCAATGAAATTCTTGCTAGGTATTACACAGGTGCTTCCTT
AGCCAAACTACAGAGCCGTGGCAATTGA

Upstream 100 bases:

>100_bases
TTCACAAGCCATAATAGCTTGTGGGCTAATCGTAGCTATCGTTAATATCCTGCTAATCTCAATCAATGGCTTCCATCAAA
CAAAAGCAAGAAATCAACTT

Downstream 100 bases:

>100_bases
GCATTACTGGGATCAGGCGCTTGAACGCAGCACTGCAGCACAATTAAATGGTGCTCTGGTACCTCTCAGCACCGAGCTCA
GCAGAATTCCTGCACGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQLLLEGGKPIRDDKSVSTNAKTVSSQPTPYFASQSSQDVNSLSLELRVGLISQSPPIQIKLKDSGFCKFHSGRMINEYT
LNNMLKIKNKQIADVKCVATDSSGIHVNNQVYRSKVYLVNRGNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVA
ARSYALAHIARPANKDFDLGDTTRWQAYRGISSQTSRSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMS
QHGAQQLARRGLKFNEILARYYTGASLAKLQSRGN

Sequences:

>Translated_275_residues
MQLLLEGGKPIRDDKSVSTNAKTVSSQPTPYFASQSSQDVNSLSLELRVGLISQSPPIQIKLKDSGFCKFHSGRMINEYT
LNNMLKIKNKQIADVKCVATDSSGIHVNNQVYRSKVYLVNRGNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVA
ARSYALAHIARPANKDFDLGDTTRWQAYRGISSQTSRSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMS
QHGAQQLARRGLKFNEILARYYTGASLAKLQSRGN
>Mature_275_residues
MQLLLEGGKPIRDDKSVSTNAKTVSSQPTPYFASQSSQDVNSLSLELRVGLISQSPPIQIKLKDSGFCKFHSGRMINEYT
LNNMLKIKNKQIADVKCVATDSSGIHVNNQVYRSKVYLVNRGNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVA
ARSYALAHIARPANKDFDLGDTTRWQAYRGISSQTSRSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMS
QHGAQQLARRGLKFNEILARYYTGASLAKLQSRGN

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 30040; Mature: 30040

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLLEGGKPIRDDKSVSTNAKTVSSQPTPYFASQSSQDVNSLSLELRVGLISQSPPIQI
CEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCEEE
KLKDSGFCKFHSGRMINEYTLNNMLKIKNKQIADVKCVATDSSGIHVNNQVYRSKVYLVN
EECCCCEEEECCCCEEEHHHHCCEEEECCCCCCEEEEEEECCCCEEECCEEEEEEEEEEE
RGNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPANKDFDLG
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DTTRWQAYRGISSQTSRSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMS
CCCHHHHHCCCCCCCCCCHHHHHHHCCEEEEECCCHHHHHHCCCCEEEEEECCCCCCCHH
QHGAQQLARRGLKFNEILARYYTGASLAKLQSRGN
HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MQLLLEGGKPIRDDKSVSTNAKTVSSQPTPYFASQSSQDVNSLSLELRVGLISQSPPIQI
CEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCEEE
KLKDSGFCKFHSGRMINEYTLNNMLKIKNKQIADVKCVATDSSGIHVNNQVYRSKVYLVN
EECCCCEEEECCCCEEEHHHHCCEEEECCCCCCEEEEEEECCCCEEECCEEEEEEEEEEE
RGNGWIAVNQLSLEDYVASVVGAEMPSLWNMEALKAQAVAARSYALAHIARPANKDFDLG
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DTTRWQAYRGISSQTSRSTQATQATKGIVLRYKGGIVESLYASTADISLQAHGHLGASMS
CCCHHHHHCCCCCCCCCCHHHHHHHCCEEEEECCCHHHHHHCCCCEEEEEECCCCCCCHH
QHGAQQLARRGLKFNEILARYYTGASLAKLQSRGN
HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA