Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is cbbY [H]

Identifier: 124023158

GI number: 124023158

Start: 1251280

End: 1252038

Strand: Direct

Name: cbbY [H]

Synonym: P9303_14541

Alternate gene names: 124023158

Gene position: 1251280-1252038 (Clockwise)

Preceding gene: 124023157

Following gene: 124023159

Centisome position: 46.64

GC content: 50.33

Gene sequence:

>759_bases
ATGAACAAGCTTTGTTCAGTGTTCTGGGACGTTGATGGCACTCTTGCTGACACAGAAATGGAAGGCCATCGTGTGGCCTT
TAATGCGGCCTTTGCTGAGGCCGAACTTGCTTGGTACTGGGATCAACTCTTATACGCTGAGCTTCTACGAATACCAGGAG
GCAGACAACGTATTGAGACCTATGCTGAGCGTCTGGGAGAAGAGTTCAATGAGGAGTTTTTGGCTCAGTTGCGTAGGCGT
AAACAACACCACTACATCGAAAGAATACGTACTGGACACGTCCCTTGGAGACCTGGTGTGCGGCGTCTTCTCATGGAACT
TCAACTGAATGGAGTGGAGCAATGGGTGGTAACAACAAGCGGTCGCGACTCTGTAAATGCCTTACTTGAGGTGAGTTTCC
CTTCTGGTGATTCACCGTTCCAGGGATGCATCACTGCTGAGGATGTTTACCTCGGCAAGCCACATCCAGAGGGTTATCTG
AATGCACTTTGTGCCAGTGGTTTCAAAAAGAATGAGGTGATAGTGATCGAAGATTCTGCCGCTGGACTTGCTGCCGCTAG
AGCTGCGAATCTGCCTTGCCTGCTCACCCCATCCCCGTGGGATCAGGAACTCAAATCACAGTTTCATCAAGCCAATGCGG
TGTTCGACCATCTTGGTGACGAAGGGTTGCCCTGCAAAGTGCTTGTAGGCCCTCCTTGTCTGCAAGGACAGGTCAAGCTG
GAGTACTTACAAAGACTCATCGTTATGGCTCCTTCATGA

Upstream 100 bases:

>100_bases
AGCTCCAGCAGGGATGTTCGGATGATGACAATGGTTACTGGCAACCTTCTGCATTTTTAGCGTTGCTTCAAGCTGTGAGG
AAGTTGTATCGCCGCTAGGC

Downstream 100 bases:

>100_bases
GCCTACAAAACACACGCTTTGCACGATTCCAGCGTCAGCTGTGGGGGCATTTTGCTCAAGCTTGGCTTGGATCATGGCGT
CGACGCAGCATTGCTCTCAT

Product: CbbY-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIETYAERLGEEFNEEFLAQLRRR
KQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTSGRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYL
NALCASGFKKNEVIVIEDSAAGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL
EYLQRLIVMAPS

Sequences:

>Translated_252_residues
MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIETYAERLGEEFNEEFLAQLRRR
KQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTSGRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYL
NALCASGFKKNEVIVIEDSAAGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL
EYLQRLIVMAPS
>Mature_252_residues
MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIETYAERLGEEFNEEFLAQLRRR
KQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTSGRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYL
NALCASGFKKNEVIVIEDSAAGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL
EYLQRLIVMAPS

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28291; Mature: 28291

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIET
CCCHHEEHCCCCCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YAERLGEEFNEEFLAQLRRRKQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECC
GRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYLNALCASGFKKNEVIVIEDSA
CCCCEEEEEEEECCCCCCCCCCCEEECCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCC
AGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL
CCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHH
EYLQRLIVMAPS
HHHHHHHHCCCC
>Mature Secondary Structure
MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIET
CCCHHEEHCCCCCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YAERLGEEFNEEFLAQLRRRKQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECC
GRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYLNALCASGFKKNEVIVIEDSA
CCCCEEEEEEEECCCCCCCCCCCEEECCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCC
AGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL
CCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHH
EYLQRLIVMAPS
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA