| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is cbbY [H]
Identifier: 124023158
GI number: 124023158
Start: 1251280
End: 1252038
Strand: Direct
Name: cbbY [H]
Synonym: P9303_14541
Alternate gene names: 124023158
Gene position: 1251280-1252038 (Clockwise)
Preceding gene: 124023157
Following gene: 124023159
Centisome position: 46.64
GC content: 50.33
Gene sequence:
>759_bases ATGAACAAGCTTTGTTCAGTGTTCTGGGACGTTGATGGCACTCTTGCTGACACAGAAATGGAAGGCCATCGTGTGGCCTT TAATGCGGCCTTTGCTGAGGCCGAACTTGCTTGGTACTGGGATCAACTCTTATACGCTGAGCTTCTACGAATACCAGGAG GCAGACAACGTATTGAGACCTATGCTGAGCGTCTGGGAGAAGAGTTCAATGAGGAGTTTTTGGCTCAGTTGCGTAGGCGT AAACAACACCACTACATCGAAAGAATACGTACTGGACACGTCCCTTGGAGACCTGGTGTGCGGCGTCTTCTCATGGAACT TCAACTGAATGGAGTGGAGCAATGGGTGGTAACAACAAGCGGTCGCGACTCTGTAAATGCCTTACTTGAGGTGAGTTTCC CTTCTGGTGATTCACCGTTCCAGGGATGCATCACTGCTGAGGATGTTTACCTCGGCAAGCCACATCCAGAGGGTTATCTG AATGCACTTTGTGCCAGTGGTTTCAAAAAGAATGAGGTGATAGTGATCGAAGATTCTGCCGCTGGACTTGCTGCCGCTAG AGCTGCGAATCTGCCTTGCCTGCTCACCCCATCCCCGTGGGATCAGGAACTCAAATCACAGTTTCATCAAGCCAATGCGG TGTTCGACCATCTTGGTGACGAAGGGTTGCCCTGCAAAGTGCTTGTAGGCCCTCCTTGTCTGCAAGGACAGGTCAAGCTG GAGTACTTACAAAGACTCATCGTTATGGCTCCTTCATGA
Upstream 100 bases:
>100_bases AGCTCCAGCAGGGATGTTCGGATGATGACAATGGTTACTGGCAACCTTCTGCATTTTTAGCGTTGCTTCAAGCTGTGAGG AAGTTGTATCGCCGCTAGGC
Downstream 100 bases:
>100_bases GCCTACAAAACACACGCTTTGCACGATTCCAGCGTCAGCTGTGGGGGCATTTTGCTCAAGCTTGGCTTGGATCATGGCGT CGACGCAGCATTGCTCTCAT
Product: CbbY-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIETYAERLGEEFNEEFLAQLRRR KQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTSGRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYL NALCASGFKKNEVIVIEDSAAGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL EYLQRLIVMAPS
Sequences:
>Translated_252_residues MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIETYAERLGEEFNEEFLAQLRRR KQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTSGRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYL NALCASGFKKNEVIVIEDSAAGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL EYLQRLIVMAPS >Mature_252_residues MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIETYAERLGEEFNEEFLAQLRRR KQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTSGRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYL NALCASGFKKNEVIVIEDSAAGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL EYLQRLIVMAPS
Specific function: Unknown
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28291; Mature: 28291
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIET CCCHHEEHCCCCCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YAERLGEEFNEEFLAQLRRRKQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECC GRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYLNALCASGFKKNEVIVIEDSA CCCCEEEEEEEECCCCCCCCCCCEEECCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCC AGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL CCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHH EYLQRLIVMAPS HHHHHHHHCCCC >Mature Secondary Structure MNKLCSVFWDVDGTLADTEMEGHRVAFNAAFAEAELAWYWDQLLYAELLRIPGGRQRIET CCCHHEEHCCCCCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YAERLGEEFNEEFLAQLRRRKQHHYIERIRTGHVPWRPGVRRLLMELQLNGVEQWVVTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECC GRDSVNALLEVSFPSGDSPFQGCITAEDVYLGKPHPEGYLNALCASGFKKNEVIVIEDSA CCCCEEEEEEEECCCCCCCCCCCEEECCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCC AGLAAARAANLPCLLTPSPWDQELKSQFHQANAVFDHLGDEGLPCKVLVGPPCLQGQVKL CCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHH EYLQRLIVMAPS HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA