| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023149
Identifier: 124023149
GI number: 124023149
Start: 1243065
End: 1243592
Strand: Reverse
Name: 124023149
Synonym: P9303_14451
Alternate gene names: NA
Gene position: 1243592-1243065 (Counterclockwise)
Preceding gene: 124023150
Following gene: 124023148
Centisome position: 46.36
GC content: 48.86
Gene sequence:
>528_bases ATGACAAGACTGCAAAAGTACTTACTTTTGCCTTGCCTGAGTCCTCTGCTGGCTGTGGTTGTAGTAGCAGTTTCAATCTC AACCAACCTGTCAACCTACGGATATGAATTGGCGATCTCCAACCTGGACACTAGTGGGTGGATGGTCCTGGGCAGCAGCG CAGGACATTTCGCCTTAACCACAAGTCTCTCCATACCACTAAGCAGAGACCCATTACGTGATCATTTCCATCAAGGGGTA AGAGAGGCTTCGCCCAATACCAGCACCACGTGGCAACGAAACTGGCAGGCAGCTAACGATGAACGATCCCAATCAAGAAC AAAGCATGATGAGAACCCAGAACGTGATTTAAGAGATCCATCTCCCACGGTGGCTGTGCCATTCCGAGTCGTACGAAGAT CATCAGTAAGGCGGCAAACACATGTTGAGAAATCGCCCCAGCGTCAACCTGTCGAGAGCAACGTTCCACATAGATATTCA TCAACAGAAAATGATTCTTGGGGAGATTCACTCAGTGAGGACTGGTAA
Upstream 100 bases:
>100_bases CAAACACAATTGAAGAGATGGTTGATTTTCTTGTTGTGAGATTGTTCGACCTCTTTGATGAAAGGCTCGCCCCCATTAAC CGCTGGAATGGTCCTTCACA
Downstream 100 bases:
>100_bases ACCAATAGCGCGACGAACTCAACGGATCGTTGAGTTCGTCGCAAAGCTGTTTAAAGTTCATTCGTCTGTACTGATCCAGT GAACGACAACGACAACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTRLQKYLLLPCLSPLLAVVVVAVSISTNLSTYGYELAISNLDTSGWMVLGSSAGHFALTTSLSIPLSRDPLRDHFHQGV REASPNTSTTWQRNWQAANDERSQSRTKHDENPERDLRDPSPTVAVPFRVVRRSSVRRQTHVEKSPQRQPVESNVPHRYS STENDSWGDSLSEDW
Sequences:
>Translated_175_residues MTRLQKYLLLPCLSPLLAVVVVAVSISTNLSTYGYELAISNLDTSGWMVLGSSAGHFALTTSLSIPLSRDPLRDHFHQGV REASPNTSTTWQRNWQAANDERSQSRTKHDENPERDLRDPSPTVAVPFRVVRRSSVRRQTHVEKSPQRQPVESNVPHRYS STENDSWGDSLSEDW >Mature_174_residues TRLQKYLLLPCLSPLLAVVVVAVSISTNLSTYGYELAISNLDTSGWMVLGSSAGHFALTTSLSIPLSRDPLRDHFHQGVR EASPNTSTTWQRNWQAANDERSQSRTKHDENPERDLRDPSPTVAVPFRVVRRSSVRRQTHVEKSPQRQPVESNVPHRYSS TENDSWGDSLSEDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19755; Mature: 19624
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLQKYLLLPCLSPLLAVVVVAVSISTNLSTYGYELAISNLDTSGWMVLGSSAGHFALT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEE TSLSIPLSRDPLRDHFHQGVREASPNTSTTWQRNWQAANDERSQSRTKHDENPERDLRDP EEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHCCCCCCCCHHCCCC SPTVAVPFRVVRRSSVRRQTHVEKSPQRQPVESNVPHRYSSTENDSWGDSLSEDW CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRLQKYLLLPCLSPLLAVVVVAVSISTNLSTYGYELAISNLDTSGWMVLGSSAGHFALT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEE TSLSIPLSRDPLRDHFHQGVREASPNTSTTWQRNWQAANDERSQSRTKHDENPERDLRDP EEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHCCCCCCCCHHCCCC SPTVAVPFRVVRRSSVRRQTHVEKSPQRQPVESNVPHRYSSTENDSWGDSLSEDW CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA