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The map label for this gene is hcaE [C]

Identifier: 124023142

GI number: 124023142

Start: 1235325

End: 1236635

Strand: Reverse

Name: hcaE [C]

Synonym: P9303_14381

Alternate gene names: 124023142

Gene position: 1236635-1235325 (Counterclockwise)

Preceding gene: 124023143

Following gene: 124023141

Centisome position: 46.1

GC content: 36.92

Gene sequence:

>1311_bases
TTGACAGTTGAGTCTCCAACCGAGAAAGCCATAACTCCTTCAGTTGGCCTGCTGGGTTGGTATTCTGTGTGCGCCAGTCA
GTTATTAAAGCAAAATGAATTATATCATCTGTCCATGTATAATGAGCCATTAGTTATATACAGAGACAAGGAAAATAAAC
CGAGATGTATCAAAGATTCGTGCCCTCATCGATCGGCATCATTTCGTGGGGGAGAAAGTAAAAATGGCGAAATCATCTGC
CCATATCATGGAGCTCGCTATACGACATCCTGCAATCAGGATGGATTTGATAGAATAACTTGCAACCATATTGTTGATTC
TGATTATGATAATTTTGCAAAATATTTACACCTGAGGCAATATCCATGTGTAGAACAAGGTGATTATATATATATTTATT
ATACAGGGGAAGCAAAGACAAGTCCAAATGATTTCAAGATAAACTCTGAGCTAGAACCAAGTCTGCCAGAGACGTATGGA
TTTGACTTAGCAGATTCAAAATTTGAAGAAGTATTTATAGACTTTAAATGCGATTGGTCTCGCATCATAGAAAACCATTT
AGACATCCTACATATATTTTGGCTGCATGGTAATACTCTGCCTGGAAATGATGTCAACAGAGAAACAATTAAAAGCTTCA
ATCAAACAATCAATAAGGATCAATATCATCTTCGAAGTGTCTACAATGAGAAAGGAAATAAAAAGGAGGAGTTTATTTCT
CAAATCTTCATCCCTCCTGGCCGTGTGATTATATTCAAGGGCTCGCCTGAGCAGGCAAGATATGTACAAGTTTTAGATCA
TATTCCTTTGGCTCACAATCGAGCACGAATCATTGTTCGTCATTATAGAAAGTTTCTTAAGAATAAGTTTCTGTGCAAAT
TACTTCTCTTTAAGCAAAGGCAGCAACAAGTATTTTACAAAATTTTCTCGGAAGATTATCTCGTCTTACAAACGCAAACC
TTTAATGAACAGATGGGCTACATGCACCAAGGGCAAAACAAACTTTTAGCAGAAGACAAGATGATTAAACATTTTTGGGA
TTGGCATCAACAATCCATTGAGAAAGAAAGCCCATGGACTATACACCCTACATCGGCACATACAAATACAATTCATCAAG
ATATGTTGATGGTATACCCTCCCGCAAACCCACAGTTATCTCATGATGTTCAACGTATAATCGATCGTAAAGTGGCCGTT
CGTCTATTCTCTATAGTTATAATCATACTAGCTTTCATTTTTGCGCCAAACTTAGTTCAACAAATCAAGTCTGGAAATGA
TTCAATACCTATGGTTGAAACTCAAGAATAA

Upstream 100 bases:

>100_bases
TGAGCACCTCACCAGAACATCAATATTATTACGCCATAACTGCAGAATTTACAAACCAGATGCCTGCACGATAAAATCGA
ATTAATAAAAAAAGACCAAG

Downstream 100 bases:

>100_bases
AGATCATAATCTCCTTGATATTTCGATTTTTATTTGTATGCCTGTTCTTCCAGGATTTGTTTTTAACTAACAATTGAACA
AAACAATTATCTTGGGCCTC

Product: Rieske iron-sulfur protein 2Fe-2S subunit

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Domain Protein; Oxidase-Related Protein; Rieske Iron-Sulphur Domain Protein; Vanillate Demethylase A; Rieske Protein; Rieske Region Protein; Vanillate Monooxygenase; Pheophorbide A Oxygenase Family; Dioxygenase Rieske Iron-Sulfur Component; Rieske Iron-Sulfur Domain Protein

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTVESPTEKAITPSVGLLGWYSVCASQLLKQNELYHLSMYNEPLVIYRDKENKPRCIKDSCPHRSASFRGGESKNGEIIC
PYHGARYTTSCNQDGFDRITCNHIVDSDYDNFAKYLHLRQYPCVEQGDYIYIYYTGEAKTSPNDFKINSELEPSLPETYG
FDLADSKFEEVFIDFKCDWSRIIENHLDILHIFWLHGNTLPGNDVNRETIKSFNQTINKDQYHLRSVYNEKGNKKEEFIS
QIFIPPGRVIIFKGSPEQARYVQVLDHIPLAHNRARIIVRHYRKFLKNKFLCKLLLFKQRQQQVFYKIFSEDYLVLQTQT
FNEQMGYMHQGQNKLLAEDKMIKHFWDWHQQSIEKESPWTIHPTSAHTNTIHQDMLMVYPPANPQLSHDVQRIIDRKVAV
RLFSIVIIILAFIFAPNLVQQIKSGNDSIPMVETQE

Sequences:

>Translated_436_residues
MTVESPTEKAITPSVGLLGWYSVCASQLLKQNELYHLSMYNEPLVIYRDKENKPRCIKDSCPHRSASFRGGESKNGEIIC
PYHGARYTTSCNQDGFDRITCNHIVDSDYDNFAKYLHLRQYPCVEQGDYIYIYYTGEAKTSPNDFKINSELEPSLPETYG
FDLADSKFEEVFIDFKCDWSRIIENHLDILHIFWLHGNTLPGNDVNRETIKSFNQTINKDQYHLRSVYNEKGNKKEEFIS
QIFIPPGRVIIFKGSPEQARYVQVLDHIPLAHNRARIIVRHYRKFLKNKFLCKLLLFKQRQQQVFYKIFSEDYLVLQTQT
FNEQMGYMHQGQNKLLAEDKMIKHFWDWHQQSIEKESPWTIHPTSAHTNTIHQDMLMVYPPANPQLSHDVQRIIDRKVAV
RLFSIVIIILAFIFAPNLVQQIKSGNDSIPMVETQE
>Mature_435_residues
TVESPTEKAITPSVGLLGWYSVCASQLLKQNELYHLSMYNEPLVIYRDKENKPRCIKDSCPHRSASFRGGESKNGEIICP
YHGARYTTSCNQDGFDRITCNHIVDSDYDNFAKYLHLRQYPCVEQGDYIYIYYTGEAKTSPNDFKINSELEPSLPETYGF
DLADSKFEEVFIDFKCDWSRIIENHLDILHIFWLHGNTLPGNDVNRETIKSFNQTINKDQYHLRSVYNEKGNKKEEFISQ
IFIPPGRVIIFKGSPEQARYVQVLDHIPLAHNRARIIVRHYRKFLKNKFLCKLLLFKQRQQQVFYKIFSEDYLVLQTQTF
NEQMGYMHQGQNKLLAEDKMIKHFWDWHQQSIEKESPWTIHPTSAHTNTIHQDMLMVYPPANPQLSHDVQRIIDRKVAVR
LFSIVIIILAFIFAPNLVQQIKSGNDSIPMVETQE

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.1.- [C]

Molecular weight: Translated: 51084; Mature: 50953

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVESPTEKAITPSVGLLGWYSVCASQLLKQNELYHLSMYNEPLVIYRDKENKPRCIKDS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCC
CPHRSASFRGGESKNGEIICPYHGARYTTSCNQDGFDRITCNHIVDSDYDNFAKYLHLRQ
CCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHC
YPCVEQGDYIYIYYTGEAKTSPNDFKINSELEPSLPETYGFDLADSKFEEVFIDFKCDWS
CCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHH
RIIENHLDILHIFWLHGNTLPGNDVNRETIKSFNQTINKDQYHLRSVYNEKGNKKEEFIS
HHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
QIFIPPGRVIIFKGSPEQARYVQVLDHIPLAHNRARIIVRHYRKFLKNKFLCKLLLFKQR
HHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQVFYKIFSEDYLVLQTQTFNEQMGYMHQGQNKLLAEDKMIKHFWDWHQQSIEKESPWT
HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
IHPTSAHTNTIHQDMLMVYPPANPQLSHDVQRIIDRKVAVRLFSIVIIILAFIFAPNLVQ
ECCCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIKSGNDSIPMVETQE
HHHCCCCCCCCEECCC
>Mature Secondary Structure 
TVESPTEKAITPSVGLLGWYSVCASQLLKQNELYHLSMYNEPLVIYRDKENKPRCIKDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCC
CPHRSASFRGGESKNGEIICPYHGARYTTSCNQDGFDRITCNHIVDSDYDNFAKYLHLRQ
CCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHC
YPCVEQGDYIYIYYTGEAKTSPNDFKINSELEPSLPETYGFDLADSKFEEVFIDFKCDWS
CCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHH
RIIENHLDILHIFWLHGNTLPGNDVNRETIKSFNQTINKDQYHLRSVYNEKGNKKEEFIS
HHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHH
QIFIPPGRVIIFKGSPEQARYVQVLDHIPLAHNRARIIVRHYRKFLKNKFLCKLLLFKQR
HHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQVFYKIFSEDYLVLQTQTFNEQMGYMHQGQNKLLAEDKMIKHFWDWHQQSIEKESPWT
HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
IHPTSAHTNTIHQDMLMVYPPANPQLSHDVQRIIDRKVAVRLFSIVIIILAFIFAPNLVQ
ECCCCCCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIKSGNDSIPMVETQE
HHHCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA