| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023083
Identifier: 124023083
GI number: 124023083
Start: 1174466
End: 1176613
Strand: Direct
Name: 124023083
Synonym: P9303_13781
Alternate gene names: NA
Gene position: 1174466-1176613 (Clockwise)
Preceding gene: 124023082
Following gene: 124023085
Centisome position: 43.78
GC content: 42.13
Gene sequence:
>2148_bases ATGGCAGATTATGAATTCCAAAGCGCTGTCATTGACGCCGCAAAGGTGTCATTCCTTAAGAGCATCTTAGGCGAAGCTAG AATTTCCGAAGCCGATCTTGTCGATCCAAACGCCAGCGGGACTGAGTATTACTTTCGATACTATTTGTGGCCTACCTCAA ATCGAATTGGTCAGGTGGCAATCGGTCGATTTGACCACGATGTTCCAGTCTACAATGATCAAGATGATTTTGTTGTATAT AACCCAATGTATATAGAAAAGCTTACCGAAACCCTTCAGAATAACTTAAAGCAAGACGGTAAGTCTAGTGGCGAATATAA GGGCTATAATATCATGAATAATGAAACAAATAATGAAGACCTTCTTCGGGTCGCGAGTGAAATTTATTCGGATGATACGA ATTCTTTGAAAGTGGCTGGAGTCGCTGGAGTTGGCAGTTCCGCGGGTCAAGTGACGGATTTGGGTGGCTGGAGTTGCGAT CCGGGTTGGAATATTACTGAAAATATCGGATTTGAGGGTGACCCTCTAGCATTTTTGGGGGAAATGAAGGCTACTACCAT ACCTCATGATTATACACCACAAGAAGCTAGTAACAGTTGGAGATTTGACAACAGTGGAGGCACTGAGGACTTGCCATGGA AGCAAGAAGTACAATTCAGTTACACCAATGTTGCATCTGTTAAAAACACTAGCACCACGAATACTGATATCAATGTTGAT ATCACTGAAACCTTAAAAGCGATACCGTTTATTGGGGACTTCATGCCCAAGGTGGAAGGGAAGTTTTCATGGGGAAGTAA AGACGAGGTTCTTAATAGTGATACTGAGTCGAAAACTTATAAGAGTACAATTAATGATACTGTGAAGGCGGGAGATATAA TTCAGTACTCTGTTCATTATGGAGAAGCCATCCATACTGCGCCAATAACTGGGAAAGTTGCTCTGTCTGGTGATATTACT CATAATATTAGTGAAATGTGGTACACAGACAGGCGTGGTAATGCAAACAGAAAGGATTCACTTTCCTCAGGTGCAGCTGA GTTTCTCCGTGATGCAATCACCTTCGGCACGTTGCCAAATGACTCCGTCGAATTCAATGAAGAGGGATCTTATATCCAAC GGGCTGGAAACTTGATATTTGATGAGGGGCAAAACTTCAGCTTTAAAAAGCACGTTGTAGTACCCAACTCCTCAGCCAGT TCTTATAGAAATGCTTTTGCTCCTGGCCAGACTTCGAAAGCTCACGAGACTGCGGCTCAAGAAGGAATAGGAGTCATGTA TGTTTCTGACATTAAACATTCTGACGACCATGTCATGGTCGGTACTCAGCATTCAGATCGGTTTCACTTCACGGGTTTAA ATCAAGAAGTGACCTCTTCTGGGGGATCAGACAAGTACTATGGGAATGAGGCTTCGAATGTCATCAATGTGAATGGTGAC GATCGTGTATATGCGAATGATGGTGATGATATTATTACTTCTAATGGTGGTGTTAATTTTATCGATGCCGGTGATGGCAA TGACAAAGTTAAAGTCCAAGTTTCAGATGAGGATGGTTTCAGTTACGTATTCCTTGGCGATGGTGCTGATGTGCTGACTC TCGAGGTAAGCAAAATAAATGACAAATATCCATCCATCATTGTTGCCGATATGGCCCTTGATGATGTTTTGAAAATTAAT AAACAGGGTGATGGAGATATTTTAGCCCGTGTTGAGCATGGAAATGTAAATCTGTATTATGACGACAATCGCTTTGCGAC CTTCCATGGGCATTCCTTTTTAGGGGATGATTTTCACTCCCTTGAAGGCGTTACTGAGTTTTCGCTTCTTAATTTTGAAT CGGATCTCAGTAGGGATTTCAAGACACTACAAAGTAGCTCGGTTTCTGCCAAGTTATTTGATGGAGATTTTTTAGTTGAT TATGCTAGTTTGCTCGAAGATAAGCGCACGCTCAAGCGTGAATTGAAAGAGATAGGTTCTGAGTTTGTTGACTCTAAGTT GGAGAAGCGATTTGTCAAATGGGCAATCGACCACCGCGAAGATTATGGAAGTATGACTGCATTGGTGACTGCGGCGAATG AAAGCTTCTTGGATGGTCTTAATGGGAAAAGTGAAGATCTTTCTGCTTTCCTTGTTCCTGATGTGTAA
Upstream 100 bases:
>100_bases GAAGGTACAAATGTCAACATTTTCCTTTCGGTTAAGATTTGCCTTTTTGGCTGCTTTTGTGCCTATATATATTGAACCTT TATAGATATTCCATTCATTC
Downstream 100 bases:
>100_bases ATCTCTGCTTTCAGAACCTCAAGCCTGAGACATTCTTTTTTATTTATAGAATAGTTTTGTGTGGCTGATTTGAGGAAGCT GCTCTGCCGGCGATATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 715; Mature: 714
Protein sequence:
>715_residues MADYEFQSAVIDAAKVSFLKSILGEARISEADLVDPNASGTEYYFRYYLWPTSNRIGQVAIGRFDHDVPVYNDQDDFVVY NPMYIEKLTETLQNNLKQDGKSSGEYKGYNIMNNETNNEDLLRVASEIYSDDTNSLKVAGVAGVGSSAGQVTDLGGWSCD PGWNITENIGFEGDPLAFLGEMKATTIPHDYTPQEASNSWRFDNSGGTEDLPWKQEVQFSYTNVASVKNTSTTNTDINVD ITETLKAIPFIGDFMPKVEGKFSWGSKDEVLNSDTESKTYKSTINDTVKAGDIIQYSVHYGEAIHTAPITGKVALSGDIT HNISEMWYTDRRGNANRKDSLSSGAAEFLRDAITFGTLPNDSVEFNEEGSYIQRAGNLIFDEGQNFSFKKHVVVPNSSAS SYRNAFAPGQTSKAHETAAQEGIGVMYVSDIKHSDDHVMVGTQHSDRFHFTGLNQEVTSSGGSDKYYGNEASNVINVNGD DRVYANDGDDIITSNGGVNFIDAGDGNDKVKVQVSDEDGFSYVFLGDGADVLTLEVSKINDKYPSIIVADMALDDVLKIN KQGDGDILARVEHGNVNLYYDDNRFATFHGHSFLGDDFHSLEGVTEFSLLNFESDLSRDFKTLQSSSVSAKLFDGDFLVD YASLLEDKRTLKRELKEIGSEFVDSKLEKRFVKWAIDHREDYGSMTALVTAANESFLDGLNGKSEDLSAFLVPDV
Sequences:
>Translated_715_residues MADYEFQSAVIDAAKVSFLKSILGEARISEADLVDPNASGTEYYFRYYLWPTSNRIGQVAIGRFDHDVPVYNDQDDFVVY NPMYIEKLTETLQNNLKQDGKSSGEYKGYNIMNNETNNEDLLRVASEIYSDDTNSLKVAGVAGVGSSAGQVTDLGGWSCD PGWNITENIGFEGDPLAFLGEMKATTIPHDYTPQEASNSWRFDNSGGTEDLPWKQEVQFSYTNVASVKNTSTTNTDINVD ITETLKAIPFIGDFMPKVEGKFSWGSKDEVLNSDTESKTYKSTINDTVKAGDIIQYSVHYGEAIHTAPITGKVALSGDIT HNISEMWYTDRRGNANRKDSLSSGAAEFLRDAITFGTLPNDSVEFNEEGSYIQRAGNLIFDEGQNFSFKKHVVVPNSSAS SYRNAFAPGQTSKAHETAAQEGIGVMYVSDIKHSDDHVMVGTQHSDRFHFTGLNQEVTSSGGSDKYYGNEASNVINVNGD DRVYANDGDDIITSNGGVNFIDAGDGNDKVKVQVSDEDGFSYVFLGDGADVLTLEVSKINDKYPSIIVADMALDDVLKIN KQGDGDILARVEHGNVNLYYDDNRFATFHGHSFLGDDFHSLEGVTEFSLLNFESDLSRDFKTLQSSSVSAKLFDGDFLVD YASLLEDKRTLKRELKEIGSEFVDSKLEKRFVKWAIDHREDYGSMTALVTAANESFLDGLNGKSEDLSAFLVPDV >Mature_714_residues ADYEFQSAVIDAAKVSFLKSILGEARISEADLVDPNASGTEYYFRYYLWPTSNRIGQVAIGRFDHDVPVYNDQDDFVVYN PMYIEKLTETLQNNLKQDGKSSGEYKGYNIMNNETNNEDLLRVASEIYSDDTNSLKVAGVAGVGSSAGQVTDLGGWSCDP GWNITENIGFEGDPLAFLGEMKATTIPHDYTPQEASNSWRFDNSGGTEDLPWKQEVQFSYTNVASVKNTSTTNTDINVDI TETLKAIPFIGDFMPKVEGKFSWGSKDEVLNSDTESKTYKSTINDTVKAGDIIQYSVHYGEAIHTAPITGKVALSGDITH NISEMWYTDRRGNANRKDSLSSGAAEFLRDAITFGTLPNDSVEFNEEGSYIQRAGNLIFDEGQNFSFKKHVVVPNSSASS YRNAFAPGQTSKAHETAAQEGIGVMYVSDIKHSDDHVMVGTQHSDRFHFTGLNQEVTSSGGSDKYYGNEASNVINVNGDD RVYANDGDDIITSNGGVNFIDAGDGNDKVKVQVSDEDGFSYVFLGDGADVLTLEVSKINDKYPSIIVADMALDDVLKINK QGDGDILARVEHGNVNLYYDDNRFATFHGHSFLGDDFHSLEGVTEFSLLNFESDLSRDFKTLQSSSVSAKLFDGDFLVDY ASLLEDKRTLKRELKEIGSEFVDSKLEKRFVKWAIDHREDYGSMTALVTAANESFLDGLNGKSEDLSAFLVPDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78835; Mature: 78704
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYEFQSAVIDAAKVSFLKSILGEARISEADLVDPNASGTEYYFRYYLWPTSNRIGQVA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEE IGRFDHDVPVYNDQDDFVVYNPMYIEKLTETLQNNLKQDGKSSGEYKGYNIMNNETNNED EECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHH LLRVASEIYSDDTNSLKVAGVAGVGSSAGQVTDLGGWSCDPGWNITENIGFEGDPLAFLG HHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCHHEEC EMKATTIPHDYTPQEASNSWRFDNSGGTEDLPWKQEVQFSYTNVASVKNTSTTNTDINVD CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCEEEEE ITETLKAIPFIGDFMPKVEGKFSWGSKDEVLNSDTESKTYKSTINDTVKAGDIIQYSVHY HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC GEAIHTAPITGKVALSGDITHNISEMWYTDRRGNANRKDSLSSGAAEFLRDAITFGTLPN CCEEEECCCCEEEEECCCCHHCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DSVEFNEEGSYIQRAGNLIFDEGQNFSFKKHVVVPNSSASSYRNAFAPGQTSKAHETAAQ CCCCCCCCCCHHHHCCCEEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHH EGIGVMYVSDIKHSDDHVMVGTQHSDRFHFTGLNQEVTSSGGSDKYYGNEASNVINVNGD CCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCEEECCCC DRVYANDGDDIITSNGGVNFIDAGDGNDKVKVQVSDEDGFSYVFLGDGADVLTLEVSKIN CEEEECCCCCEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCC DKYPSIIVADMALDDVLKINKQGDGDILARVEHGNVNLYYDDNRFATFHGHSFLGDDFHS CCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCEEEEEECCCCCCCCHHH LEGVTEFSLLNFESDLSRDFKTLQSSSVSAKLFDGDFLVDYASLLEDKRTLKRELKEIGS HCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH EFVDSKLEKRFVKWAIDHREDYGSMTALVTAANESFLDGLNGKSEDLSAFLVPDV HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCCCCCCEEEECCCC >Mature Secondary Structure ADYEFQSAVIDAAKVSFLKSILGEARISEADLVDPNASGTEYYFRYYLWPTSNRIGQVA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEE IGRFDHDVPVYNDQDDFVVYNPMYIEKLTETLQNNLKQDGKSSGEYKGYNIMNNETNNED EECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHH LLRVASEIYSDDTNSLKVAGVAGVGSSAGQVTDLGGWSCDPGWNITENIGFEGDPLAFLG HHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCHHEEC EMKATTIPHDYTPQEASNSWRFDNSGGTEDLPWKQEVQFSYTNVASVKNTSTTNTDINVD CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCEEEEE ITETLKAIPFIGDFMPKVEGKFSWGSKDEVLNSDTESKTYKSTINDTVKAGDIIQYSVHY HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC GEAIHTAPITGKVALSGDITHNISEMWYTDRRGNANRKDSLSSGAAEFLRDAITFGTLPN CCEEEECCCCEEEEECCCCHHCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DSVEFNEEGSYIQRAGNLIFDEGQNFSFKKHVVVPNSSASSYRNAFAPGQTSKAHETAAQ CCCCCCCCCCHHHHCCCEEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHH EGIGVMYVSDIKHSDDHVMVGTQHSDRFHFTGLNQEVTSSGGSDKYYGNEASNVINVNGD CCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCEEECCCC DRVYANDGDDIITSNGGVNFIDAGDGNDKVKVQVSDEDGFSYVFLGDGADVLTLEVSKIN CEEEECCCCCEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCC DKYPSIIVADMALDDVLKINKQGDGDILARVEHGNVNLYYDDNRFATFHGHSFLGDDFHS CCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCEEEEEECCCCCCCCHHH LEGVTEFSLLNFESDLSRDFKTLQSSSVSAKLFDGDFLVDYASLLEDKRTLKRELKEIGS HCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH EFVDSKLEKRFVKWAIDHREDYGSMTALVTAANESFLDGLNGKSEDLSAFLVPDV HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA