| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023075
Identifier: 124023075
GI number: 124023075
Start: 1170786
End: 1171280
Strand: Direct
Name: 124023075
Synonym: P9303_13701
Alternate gene names: NA
Gene position: 1170786-1171280 (Clockwise)
Preceding gene: 124023074
Following gene: 124023076
Centisome position: 43.64
GC content: 49.29
Gene sequence:
>495_bases TTGAGCGATCAGTGGAATAACAGCTCTGAGGCTGTAGATGTTCGAGTAAATGAGGGCAAACTGAGAGCAAAACGCTTACT GCCATCTGGCTGCAGTTTCCATATCACGCTGCGATGCAATAGCAGGCAGTTCTTGATTGCCAAAACCCTTAGGCGTGATG TGTTGTTGGCAGTGCTCAATAAAGCCAAGCAGAAATTTGCCGTGAAGGTTTATGGGCTCTGCCTGATGGCTAACCACCTT CACTTACTGCTTAAACCAGAGGATGCAAAGGATTTGCCGAGGTTGATGCACTGGTTCGCTTGGTATTCAGCCATGGCCTT GAACCGCTTGAGCGGTCGTTGTGGGCACTTCTGGGAGGCCAGGTATTTCTCAACTCCGATCCACCCAAAAGATCACCGGC GAATGCTGAATACCTTGAGGTATATCCATGCCAACCCAAAAGCGGCTGGGGTAAGGAAAGGCTTTTATGACCCCTATTCC AACTATGGCCACTAA
Upstream 100 bases:
>100_bases GGAAAAGACTTCAACGCGAAGGGTGGAGGGTCGCGTCAGCCCAAAAGAATTTATCCGCAGAGCTTTGGTGAAGCTGGCTG TGCTCTCAGACGACGCGTGA
Downstream 100 bases:
>100_bases ATCAGGTTGCAATCAGACGGCATCAGTGAATGGAGCCCTGCCTTTTTAAAGCTCTCGGCAACGCTCGATGGATGCGTCAA GCGCTATGAGCGTTTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSDQWNNSSEAVDVRVNEGKLRAKRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLNKAKQKFAVKVYGLCLMANHL HLLLKPEDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYS NYGH
Sequences:
>Translated_164_residues MSDQWNNSSEAVDVRVNEGKLRAKRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLNKAKQKFAVKVYGLCLMANHL HLLLKPEDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYS NYGH >Mature_163_residues SDQWNNSSEAVDVRVNEGKLRAKRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLNKAKQKFAVKVYGLCLMANHLH LLLKPEDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYSN YGH
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19066; Mature: 18935
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQWNNSSEAVDVRVNEGKLRAKRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLN CCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH KAKQKFAVKVYGLCLMANHLHLLLKPEDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEA HHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECH RYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYSNYGH HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDQWNNSSEAVDVRVNEGKLRAKRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLN CCCCCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH KAKQKFAVKVYGLCLMANHLHLLLKPEDAKDLPRLMHWFAWYSAMALNRLSGRCGHFWEA HHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECH RYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYSNYGH HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA