| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023051
Identifier: 124023051
GI number: 124023051
Start: 1153106
End: 1154212
Strand: Reverse
Name: 124023051
Synonym: P9303_13461
Alternate gene names: NA
Gene position: 1154212-1153106 (Counterclockwise)
Preceding gene: 124023053
Following gene: 124023047
Centisome position: 43.02
GC content: 43.72
Gene sequence:
>1107_bases ATGAGCAAGAATCCCTTGCATCGCGCCTTCGATTTACTAACAGGGCAATGGTCTATTTTCTTGGAACAACCTGTTCCAGT TGAAGTGCTTGATGAGGAACGCATTGCTAACTCTTTGCCTTCCTTTGGCTTCTTTGTTTTACTTATCACATCAACAATAA TCGCAACGTTTGGACTCATTGCCAACAACACTGCCGTTGTAATTGGAGCCATGATCGTGGCTCCATTAATGAATCCAATC TTGAGCATGGCGTATGGGATATCAATTGCAAGCAGCCTGTTGATCCGACGATCATTAGTGACCTTGATCATAGGTACGGG AGTCGTTGTTATCACATCAGCATTGATAACAGCGTGCATGCCGGTAAGAGTCTTAGGCTCAGAAATACTGGCTCGTACAT CACCAAATCTGATCGACCTGCTAGTGGCTATTGCGGCCGGAATAGCTGGTGCATTTTCTCTAACCCGCAAGCGTATTGCT AGTTCTATAGCTGGGGTCGCAATCGCCGTTGCGCTTGTGCCTCCACTTTGCGTTAGCGGCATTGGGTTAACGCTTGATCC AGAGATCAGTGCCAGATTTGCTAGAGGGGTAATAAGGGGGCTTAACCATGAGGTTGCTACTGGGTCGTTCATACTTTTTC TGGCCAACCTTATAGGCATCACCTTTGCCGCTTCTCTGACCTTTTTAAGTCAGTCCTATGGATCGATCAAGCGCTCATGG CTTGCATTATTAGCATGGTTAGCACTGATTATTCTTATTTGCGTACCTCTAAGTTCATCCTTAAGAAAGTTCTTCCTTAC AAAGAAGATTGAGATGGAACTCTCAACAATCGGGGCAAATCAACAAGAGCCAGGAACAACAAATATAAAAATGCCAGGAA TTAAACAGAAGATGCAGATCCGCTATATGTATGTGAATTTAAAAGAAGATCGTGCTGTTCTAGACCTTGTACTCAATGTC CCAGAAGGCACACTGACTGAGGAAAAAGTAGCCTCTATTAATCGAATGCTTTTTGAATCAATAAAACAGTTTGGGATTCG ACAACTCGATGTAGACACAAGAATCGTCCCTTCACGAGTTCATCAGTACAGAGAGACTCTTAAATAA
Upstream 100 bases:
>100_bases AAAATAAGTAAATAGGCCAAATATTGTGAAAAGTTTCTGGAAGATGAAATTTGAACAGGGATAACATAGTCTTACAAGCC AGGTTCGAGTTAATTACAAA
Downstream 100 bases:
>100_bases TCATTTTCTTAGCCTAGGGAGTGGGAAATTAGCAATTAAACATTCAAGAAGACTCAAACTATCGCATATGCAAAAGATAC ATTTGACTGAACATTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIGAMIVAPLMNPI LSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACMPVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIA SSIAGVAIAVALVPPLCVSGIGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQIRYMYVNLKEDRAVLDLVLNV PEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRVHQYRETLK
Sequences:
>Translated_368_residues MSKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIGAMIVAPLMNPI LSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACMPVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIA SSIAGVAIAVALVPPLCVSGIGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQIRYMYVNLKEDRAVLDLVLNV PEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRVHQYRETLK >Mature_367_residues SKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIGAMIVAPLMNPIL SMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACMPVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIAS SIAGVAIAVALVPPLCVSGIGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSWL ALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQIRYMYVNLKEDRAVLDLVLNVP EGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRVHQYRETLK
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI19921100, Length=155, Percent_Identity=29.6774193548387, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 39915; Mature: 39784
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLI CCCCHHHHHHHHHCCCEEEEECCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ANNTAVVIGAMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH PVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIASSIAGVAIAVALVPPLCVSG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW CCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEE RYMYVNLKEDRAVLDLVLNVPEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRV EEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH HQYRETLK HHHHHHCC >Mature Secondary Structure SKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLI CCCHHHHHHHHHCCCEEEEECCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ANNTAVVIGAMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH PVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIASSIAGVAIAVALVPPLCVSG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW CCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEE RYMYVNLKEDRAVLDLVLNVPEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRV EEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH HQYRETLK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]