Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023051

Identifier: 124023051

GI number: 124023051

Start: 1153106

End: 1154212

Strand: Reverse

Name: 124023051

Synonym: P9303_13461

Alternate gene names: NA

Gene position: 1154212-1153106 (Counterclockwise)

Preceding gene: 124023053

Following gene: 124023047

Centisome position: 43.02

GC content: 43.72

Gene sequence:

>1107_bases
ATGAGCAAGAATCCCTTGCATCGCGCCTTCGATTTACTAACAGGGCAATGGTCTATTTTCTTGGAACAACCTGTTCCAGT
TGAAGTGCTTGATGAGGAACGCATTGCTAACTCTTTGCCTTCCTTTGGCTTCTTTGTTTTACTTATCACATCAACAATAA
TCGCAACGTTTGGACTCATTGCCAACAACACTGCCGTTGTAATTGGAGCCATGATCGTGGCTCCATTAATGAATCCAATC
TTGAGCATGGCGTATGGGATATCAATTGCAAGCAGCCTGTTGATCCGACGATCATTAGTGACCTTGATCATAGGTACGGG
AGTCGTTGTTATCACATCAGCATTGATAACAGCGTGCATGCCGGTAAGAGTCTTAGGCTCAGAAATACTGGCTCGTACAT
CACCAAATCTGATCGACCTGCTAGTGGCTATTGCGGCCGGAATAGCTGGTGCATTTTCTCTAACCCGCAAGCGTATTGCT
AGTTCTATAGCTGGGGTCGCAATCGCCGTTGCGCTTGTGCCTCCACTTTGCGTTAGCGGCATTGGGTTAACGCTTGATCC
AGAGATCAGTGCCAGATTTGCTAGAGGGGTAATAAGGGGGCTTAACCATGAGGTTGCTACTGGGTCGTTCATACTTTTTC
TGGCCAACCTTATAGGCATCACCTTTGCCGCTTCTCTGACCTTTTTAAGTCAGTCCTATGGATCGATCAAGCGCTCATGG
CTTGCATTATTAGCATGGTTAGCACTGATTATTCTTATTTGCGTACCTCTAAGTTCATCCTTAAGAAAGTTCTTCCTTAC
AAAGAAGATTGAGATGGAACTCTCAACAATCGGGGCAAATCAACAAGAGCCAGGAACAACAAATATAAAAATGCCAGGAA
TTAAACAGAAGATGCAGATCCGCTATATGTATGTGAATTTAAAAGAAGATCGTGCTGTTCTAGACCTTGTACTCAATGTC
CCAGAAGGCACACTGACTGAGGAAAAAGTAGCCTCTATTAATCGAATGCTTTTTGAATCAATAAAACAGTTTGGGATTCG
ACAACTCGATGTAGACACAAGAATCGTCCCTTCACGAGTTCATCAGTACAGAGAGACTCTTAAATAA

Upstream 100 bases:

>100_bases
AAAATAAGTAAATAGGCCAAATATTGTGAAAAGTTTCTGGAAGATGAAATTTGAACAGGGATAACATAGTCTTACAAGCC
AGGTTCGAGTTAATTACAAA

Downstream 100 bases:

>100_bases
TCATTTTCTTAGCCTAGGGAGTGGGAAATTAGCAATTAAACATTCAAGAAGACTCAAACTATCGCATATGCAAAAGATAC
ATTTGACTGAACATTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIGAMIVAPLMNPI
LSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACMPVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIA
SSIAGVAIAVALVPPLCVSGIGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW
LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQIRYMYVNLKEDRAVLDLVLNV
PEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRVHQYRETLK

Sequences:

>Translated_368_residues
MSKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIGAMIVAPLMNPI
LSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACMPVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIA
SSIAGVAIAVALVPPLCVSGIGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW
LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQIRYMYVNLKEDRAVLDLVLNV
PEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRVHQYRETLK
>Mature_367_residues
SKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLIANNTAVVIGAMIVAPLMNPIL
SMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACMPVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIAS
SIAGVAIAVALVPPLCVSGIGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSWL
ALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQIRYMYVNLKEDRAVLDLVLNVP
EGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRVHQYRETLK

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19921100, Length=155, Percent_Identity=29.6774193548387, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 39915; Mature: 39784

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLI
CCCCHHHHHHHHHCCCEEEEECCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ANNTAVVIGAMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
PVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIASSIAGVAIAVALVPPLCVSG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW
CCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEE
RYMYVNLKEDRAVLDLVLNVPEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRV
EEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH
HQYRETLK
HHHHHHCC
>Mature Secondary Structure 
SKNPLHRAFDLLTGQWSIFLEQPVPVEVLDEERIANSLPSFGFFVLLITSTIIATFGLI
CCCHHHHHHHHHCCCEEEEECCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ANNTAVVIGAMIVAPLMNPILSMAYGISIASSLLIRRSLVTLIIGTGVVVITSALITACM
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
PVRVLGSEILARTSPNLIDLLVAIAAGIAGAFSLTRKRIASSIAGVAIAVALVPPLCVSG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGLTLDPEISARFARGVIRGLNHEVATGSFILFLANLIGITFAASLTFLSQSYGSIKRSW
CCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAWLALIILICVPLSSSLRKFFLTKKIEMELSTIGANQQEPGTTNIKMPGIKQKMQI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEE
RYMYVNLKEDRAVLDLVLNVPEGTLTEEKVASINRMLFESIKQFGIRQLDVDTRIVPSRV
EEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH
HQYRETLK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]