| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023033
Identifier: 124023033
GI number: 124023033
Start: 1133240
End: 1134355
Strand: Reverse
Name: 124023033
Synonym: P9303_13281
Alternate gene names: NA
Gene position: 1134355-1133240 (Counterclockwise)
Preceding gene: 124023036
Following gene: 124023032
Centisome position: 42.28
GC content: 46.15
Gene sequence:
>1116_bases ATGAGTATTGCTGGTCAGTTTTGTGCTCAAGGAAATATATCAAGTATCGATGTACTGGGATCTGGCAACGTCAATGATAC TTTTTTAGTGGCCTTGACTGGGACTGAACCTCAGCATTTTGTGCTTCAACGACTCAACACCCATGTGTTTGATCGACCTG ATCTAGTGATGAAAAACATGCTCAACCTTGTTGAACATGTGGAAAGAAAATTAGCCTCAAATCCATCAGAGCTAACCGGC AGGAGATGGGAGATCCCAAGAGTTCTACCAGTTCGTGGCTTAGATCAACATTGGATTGAACAAGATGGACAGTTCTGGCG TTCCATCACCTACATCAACTCCGCTACAACTGTTGAGGTACTCCGCGACTATGAACACGCTAAAGAAATCGGATATGCAC TTGGCATGTTTCATTACCTCATCAGTGATCTCCCCAACGATGGATTAGCAGACACGCTTGAGAATTTTCACGTTACTCCT GCTTACTTACAAGAGTTCGACATCGCCCAAACCATAGGATGCAGTGGTAGCGTTACAACTTTGAAGCGAGACTCACGCCT TAGCTCGGCTATGCATTTCATAGAGACCCGTCGCGCTGGCGTCGATGTACTAGAAGCCGCACTTTGTCGTGGTGAACTAA AGAAACGTCCCATTCATGGTGATCCGAAGATCAACAATGTCATGATCGACAACCTCACAAGACAGGCGGTGGGGTTGATT GACCTCGATACCGTCAAGCCTGGCCTGGTTCACTATGACATTGGTGATTGCCTTCGTTCCTGTTGTAATCCAGCAGGAGA GGAAGCTACCGATATCAGCCAGGTTCAATTTGATCTCTCAGTATGTGAAGCAATCCTTGATGGATACCTATCTGTAGCAA GAGGCTTCTTGAGTGAAAGGGATTATCACTACATCCCCGAGTGCATCAAATTGATCCCATTTGAACTTGGTTTGCGCTTC CTTACTGATCACCTCAATGGCAACATCTACTTCAAAACGAAACATCGAAACCAAAACCTTGATCGAGCGGAGGTGCAGTT CCGCCTCATGGAAAGTATTGAAGCTCAGTGGACCTCTATTGTTGGCTTGGTAGAGCGCCTGAGGAGCCAAAGCTAA
Upstream 100 bases:
>100_bases CTGATCTCTGGCAAAAGCCTTTAAAAGACATCATCGTTGCTCATAAAGAAACAAGTAAGCAGTCTTGGCCAAATCCCCAC TCGTGACCAGCAATGCTCTA
Downstream 100 bases:
>100_bases AGATGGCTCGCCATGCTGTCATGACACGCCAAGTATGCACTCTGGTTCCCTATGAACCAAGGCAGAAACCAAACTTACTA GTTAGTGCTGAGTTTGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Phosphotransferase Family Protein; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase; Phosphotransferase
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSIAGQFCAQGNISSIDVLGSGNVNDTFLVALTGTEPQHFVLQRLNTHVFDRPDLVMKNMLNLVEHVERKLASNPSELTG RRWEIPRVLPVRGLDQHWIEQDGQFWRSITYINSATTVEVLRDYEHAKEIGYALGMFHYLISDLPNDGLADTLENFHVTP AYLQEFDIAQTIGCSGSVTTLKRDSRLSSAMHFIETRRAGVDVLEAALCRGELKKRPIHGDPKINNVMIDNLTRQAVGLI DLDTVKPGLVHYDIGDCLRSCCNPAGEEATDISQVQFDLSVCEAILDGYLSVARGFLSERDYHYIPECIKLIPFELGLRF LTDHLNGNIYFKTKHRNQNLDRAEVQFRLMESIEAQWTSIVGLVERLRSQS
Sequences:
>Translated_371_residues MSIAGQFCAQGNISSIDVLGSGNVNDTFLVALTGTEPQHFVLQRLNTHVFDRPDLVMKNMLNLVEHVERKLASNPSELTG RRWEIPRVLPVRGLDQHWIEQDGQFWRSITYINSATTVEVLRDYEHAKEIGYALGMFHYLISDLPNDGLADTLENFHVTP AYLQEFDIAQTIGCSGSVTTLKRDSRLSSAMHFIETRRAGVDVLEAALCRGELKKRPIHGDPKINNVMIDNLTRQAVGLI DLDTVKPGLVHYDIGDCLRSCCNPAGEEATDISQVQFDLSVCEAILDGYLSVARGFLSERDYHYIPECIKLIPFELGLRF LTDHLNGNIYFKTKHRNQNLDRAEVQFRLMESIEAQWTSIVGLVERLRSQS >Mature_370_residues SIAGQFCAQGNISSIDVLGSGNVNDTFLVALTGTEPQHFVLQRLNTHVFDRPDLVMKNMLNLVEHVERKLASNPSELTGR RWEIPRVLPVRGLDQHWIEQDGQFWRSITYINSATTVEVLRDYEHAKEIGYALGMFHYLISDLPNDGLADTLENFHVTPA YLQEFDIAQTIGCSGSVTTLKRDSRLSSAMHFIETRRAGVDVLEAALCRGELKKRPIHGDPKINNVMIDNLTRQAVGLID LDTVKPGLVHYDIGDCLRSCCNPAGEEATDISQVQFDLSVCEAILDGYLSVARGFLSERDYHYIPECIKLIPFELGLRFL TDHLNGNIYFKTKHRNQNLDRAEVQFRLMESIEAQWTSIVGLVERLRSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41889; Mature: 41758
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAGQFCAQGNISSIDVLGSGNVNDTFLVALTGTEPQHFVLQRLNTHVFDRPDLVMKNM CCCCCCHHCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH LNLVEHVERKLASNPSELTGRRWEIPRVLPVRGLDQHWIEQDGQFWRSITYINSATTVEV HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH LRDYEHAKEIGYALGMFHYLISDLPNDGLADTLENFHVTPAYLQEFDIAQTIGCSGSVTT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH LKRDSRLSSAMHFIETRRAGVDVLEAALCRGELKKRPIHGDPKINNVMIDNLTRQAVGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCE DLDTVKPGLVHYDIGDCLRSCCNPAGEEATDISQVQFDLSVCEAILDGYLSVARGFLSER EECCCCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DYHYIPECIKLIPFELGLRFLTDHLNGNIYFKTKHRNQNLDRAEVQFRLMESIEAQWTSI CCHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH VGLVERLRSQS HHHHHHHHCCC >Mature Secondary Structure SIAGQFCAQGNISSIDVLGSGNVNDTFLVALTGTEPQHFVLQRLNTHVFDRPDLVMKNM CCCCCHHCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHH LNLVEHVERKLASNPSELTGRRWEIPRVLPVRGLDQHWIEQDGQFWRSITYINSATTVEV HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH LRDYEHAKEIGYALGMFHYLISDLPNDGLADTLENFHVTPAYLQEFDIAQTIGCSGSVTT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH LKRDSRLSSAMHFIETRRAGVDVLEAALCRGELKKRPIHGDPKINNVMIDNLTRQAVGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCE DLDTVKPGLVHYDIGDCLRSCCNPAGEEATDISQVQFDLSVCEAILDGYLSVARGFLSER EECCCCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DYHYIPECIKLIPFELGLRFLTDHLNGNIYFKTKHRNQNLDRAEVQFRLMESIEAQWTSI CCHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH VGLVERLRSQS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA