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The map label for this gene is yfiK [H]

Identifier: 124022984

GI number: 124022984

Start: 1099543

End: 1100244

Strand: Direct

Name: yfiK [H]

Synonym: P9303_12791

Alternate gene names: 124022984

Gene position: 1099543-1100244 (Clockwise)

Preceding gene: 124022978

Following gene: 124022985

Centisome position: 40.99

GC content: 49.15

Gene sequence:

>702_bases
ATGGAGTTCAACCACCACTCAGAGGCTTTAGAGACTGCTCGCAGAAAGTGCCGTGAAGCCTTAGCAGGCAAAACATCTGT
TGCTTGTATGGGGGATCGCTTAGCTCTAAATAGCTTTTGCCTTGTTAAGCCGATCTATGACTCCATTGCCGCTGCATCGA
CAACACAAGCAGAAGGTATACAAGCGATTGGCAAACATCGCCCAGACATCCTTTTCACCTCTGATGACCTAGAGCAGGGA
TATGGGATCGACCTCGTCAAAGAAGCAAAGCTTGCCTGCGCTGAGATCAAGGCATTGATCTTTCTTAGACGCGAAACCAA
AGAAGTCGTCGATGAAGCCTTAGATGCTGGTGCTGATGGCGTGATATTTGTCTCTTCTGTCGGCAGTGGTAATGGCGACT
TCATTCAATCGCTACTGACGACACTCAAAGGCGGGATCTACTACCCAGCTGATGTGCGTGAGCTGGCACGAGATACCAAA
CAGCCCAACGATGCCCCTGTTATCGACTGTCAGCTCACAGAAAGGGAACTAGAGGTTCTCAATGCAATTGTCGGAGGGCT
TTCCAATAAGGAAATCTCAGAGTCTCTGTTTGTCTCTAGTGAAACCGTCAAAAGCAATGTGAGCACAATCATCAGCAAGC
TAGGGGTGCGTGTTCGAACTCAAGCAGCAGTCTTTGCGATCAGACATCGCATCGTCGGGTGA

Upstream 100 bases:

>100_bases
CTTAAGCACTACTGATCACACATCACCCACGCTGTGGATTTCAGTGGAGAGCCACTCCCCCATTTGGGGGTTAGGTCTCT
AGCCCTGTAGCGTTTGCTCT

Downstream 100 bases:

>100_bases
ACACGCTTAACAAGGTTTTCCCTAGGTCAGTTGCATCAGCCTTCTGAGACGATGTCTAGATAAGCGTTAGTAAGGCGTAC
CTTGCGTTCCTCAGACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEFNHHSEALETARRKCREALAGKTSVACMGDRLALNSFCLVKPIYDSIAAASTTQAEGIQAIGKHRPDILFTSDDLEQG
YGIDLVKEAKLACAEIKALIFLRRETKEVVDEALDAGADGVIFVSSVGSGNGDFIQSLLTTLKGGIYYPADVRELARDTK
QPNDAPVIDCQLTERELEVLNAIVGGLSNKEISESLFVSSETVKSNVSTIISKLGVRVRTQAAVFAIRHRIVG

Sequences:

>Translated_233_residues
MEFNHHSEALETARRKCREALAGKTSVACMGDRLALNSFCLVKPIYDSIAAASTTQAEGIQAIGKHRPDILFTSDDLEQG
YGIDLVKEAKLACAEIKALIFLRRETKEVVDEALDAGADGVIFVSSVGSGNGDFIQSLLTTLKGGIYYPADVRELARDTK
QPNDAPVIDCQLTERELEVLNAIVGGLSNKEISESLFVSSETVKSNVSTIISKLGVRVRTQAAVFAIRHRIVG
>Mature_233_residues
MEFNHHSEALETARRKCREALAGKTSVACMGDRLALNSFCLVKPIYDSIAAASTTQAEGIQAIGKHRPDILFTSDDLEQG
YGIDLVKEAKLACAEIKALIFLRRETKEVVDEALDAGADGVIFVSSVGSGNGDFIQSLLTTLKGGIYYPADVRELARDTK
QPNDAPVIDCQLTERELEVLNAIVGGLSNKEISESLFVSSETVKSNVSTIISKLGVRVRTQAAVFAIRHRIVG

Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786747, Length=152, Percent_Identity=29.6052631578947, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25183; Mature: 25183

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFNHHSEALETARRKCREALAGKTSVACMGDRLALNSFCLVKPIYDSIAAASTTQAEGI
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHH
QAIGKHRPDILFTSDDLEQGYGIDLVKEAKLACAEIKALIFLRRETKEVVDEALDAGADG
HHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VIFVSSVGSGNGDFIQSLLTTLKGGIYYPADVRELARDTKQPNDAPVIDCQLTERELEVL
EEEEEECCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHH
NAIVGGLSNKEISESLFVSSETVKSNVSTIISKLGVRVRTQAAVFAIRHRIVG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFNHHSEALETARRKCREALAGKTSVACMGDRLALNSFCLVKPIYDSIAAASTTQAEGI
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHH
QAIGKHRPDILFTSDDLEQGYGIDLVKEAKLACAEIKALIFLRRETKEVVDEALDAGADG
HHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VIFVSSVGSGNGDFIQSLLTTLKGGIYYPADVRELARDTKQPNDAPVIDCQLTERELEVL
EEEEEECCCCCHHHHHHHHHHHCCCEECCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHH
NAIVGGLSNKEISESLFVSSETVKSNVSTIISKLGVRVRTQAAVFAIRHRIVG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]