| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022975
Identifier: 124022975
GI number: 124022975
Start: 1093209
End: 1094192
Strand: Reverse
Name: 124022975
Synonym: P9303_12701
Alternate gene names: NA
Gene position: 1094192-1093209 (Counterclockwise)
Preceding gene: 124022976
Following gene: 124022971
Centisome position: 40.79
GC content: 42.68
Gene sequence:
>984_bases ATGACAGAAACATCCAGCCCAAAAAAGCAAAAAAAGTATCGCCTTCCAAAGAGGCAGAAGGAAGTTCTTGATCAGCTTCT TGTTAGCATCCGAAGTGCACCCAATGTCACGGCGAGACTAAACAGAAAAACAATTACATGCTTGCTAAGCAGCACGCAGG ATAAATTATATGCAGGAGTAGAAATGAGAAAGAACAAATTTTCCTTGACCTATAGAGTTGAACAGGACAAGGCAGATAAC AGTCAATTAGTTCATGACCTATTTCGCGAGGTTTCGCAAGGGCTCAGTTGCGCAAAAATCACTACTGGAAAGTTTTATAC TCAAATACTATTAGATGCCGACATAGCAAAAATGAACCTTCTGATTCGGAGGTTGGCAGACAAGCTAGAAGATGAGGATC TGGGCAACTCACTGACTAATGGCACGCAAAATTTTCTCCAGCTAGGTACACAGTGCGATCAATCTTACTTTGATGATGTA GCACAAATTATTCACTTCTCTTCTAGAGAAAATCTAAAATGGCCTTTCGAGGGCTCCTTTCGCAAAACACTAGGCTTTGA CTCTGTGGACCGACTCATTACGATTGGGCACTCTCAACTTGCTCTAAGCGAAAAGGCAAATGAACTTTGGAGGGAGCATG TTGTTCCAGTAGTAATGATTAAACGAAAAGTTTATGAGATGGCTAAAAACCATGCTCCACCCAGAGTTATCAGTGAGTTC CTCAAAGCTCATCTTGCCATACTAATTATTACCAGGAAGGAAGCTGACCTTATGGACCGACAGCTTACAGAGAGCAACGA GAGTCTTAGAACTTCAATGCCGGAAGGATGGGATTGGGGCCAGGATCCTCTTGCTAGGATTAAAGCTGTGGGAATAAAGC CTCACCTGATTGGTGGGTACCAACCTCATCCATGGCAAGGCTGGAAGCCCACTGCAGTGAATAGCCTTTGGTATTGGCTA AATAAACCAATATTGAATTTCTAA
Upstream 100 bases:
>100_bases AACATTCACCGGAAATATCCCACGTTGAGGTGATGTAGTTACAGACTAATTCAGCGATGTTGAAGAGGTCCATGAGGGGG ACCTCCACATCCTGAGATAA
Downstream 100 bases:
>100_bases CTACCAGTCGGAAAGCCTGAAGCCCTTGCGAGACGGCCTCAAACCAGCGGGGCTCGTTTGATTTCTTCAAGCCACGGGTT CTGCAGACCTTGCCCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTETSSPKKQKKYRLPKRQKEVLDQLLVSIRSAPNVTARLNRKTITCLLSSTQDKLYAGVEMRKNKFSLTYRVEQDKADN SQLVHDLFREVSQGLSCAKITTGKFYTQILLDADIAKMNLLIRRLADKLEDEDLGNSLTNGTQNFLQLGTQCDQSYFDDV AQIIHFSSRENLKWPFEGSFRKTLGFDSVDRLITIGHSQLALSEKANELWREHVVPVVMIKRKVYEMAKNHAPPRVISEF LKAHLAILIITRKEADLMDRQLTESNESLRTSMPEGWDWGQDPLARIKAVGIKPHLIGGYQPHPWQGWKPTAVNSLWYWL NKPILNF
Sequences:
>Translated_327_residues MTETSSPKKQKKYRLPKRQKEVLDQLLVSIRSAPNVTARLNRKTITCLLSSTQDKLYAGVEMRKNKFSLTYRVEQDKADN SQLVHDLFREVSQGLSCAKITTGKFYTQILLDADIAKMNLLIRRLADKLEDEDLGNSLTNGTQNFLQLGTQCDQSYFDDV AQIIHFSSRENLKWPFEGSFRKTLGFDSVDRLITIGHSQLALSEKANELWREHVVPVVMIKRKVYEMAKNHAPPRVISEF LKAHLAILIITRKEADLMDRQLTESNESLRTSMPEGWDWGQDPLARIKAVGIKPHLIGGYQPHPWQGWKPTAVNSLWYWL NKPILNF >Mature_326_residues TETSSPKKQKKYRLPKRQKEVLDQLLVSIRSAPNVTARLNRKTITCLLSSTQDKLYAGVEMRKNKFSLTYRVEQDKADNS QLVHDLFREVSQGLSCAKITTGKFYTQILLDADIAKMNLLIRRLADKLEDEDLGNSLTNGTQNFLQLGTQCDQSYFDDVA QIIHFSSRENLKWPFEGSFRKTLGFDSVDRLITIGHSQLALSEKANELWREHVVPVVMIKRKVYEMAKNHAPPRVISEFL KAHLAILIITRKEADLMDRQLTESNESLRTSMPEGWDWGQDPLARIKAVGIKPHLIGGYQPHPWQGWKPTAVNSLWYWLN KPILNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37609; Mature: 37478
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETSSPKKQKKYRLPKRQKEVLDQLLVSIRSAPNVTARLNRKTITCLLSSTQDKLYAGV CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEHHCCHHHHHHHH EMRKNKFSLTYRVEQDKADNSQLVHDLFREVSQGLSCAKITTGKFYTQILLDADIAKMNL HHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH LIRRLADKLEDEDLGNSLTNGTQNFLQLGTQCDQSYFDDVAQIIHFSSRENLKWPFEGSF HHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH RKTLGFDSVDRLITIGHSQLALSEKANELWREHVVPVVMIKRKVYEMAKNHAPPRVISEF HHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LKAHLAILIITRKEADLMDRQLTESNESLRTSMPEGWDWGQDPLARIKAVGIKPHLIGGY HHHHHEEEEEECCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCC QPHPWQGWKPTAVNSLWYWLNKPILNF CCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TETSSPKKQKKYRLPKRQKEVLDQLLVSIRSAPNVTARLNRKTITCLLSSTQDKLYAGV CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEHHCCHHHHHHHH EMRKNKFSLTYRVEQDKADNSQLVHDLFREVSQGLSCAKITTGKFYTQILLDADIAKMNL HHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH LIRRLADKLEDEDLGNSLTNGTQNFLQLGTQCDQSYFDDVAQIIHFSSRENLKWPFEGSF HHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH RKTLGFDSVDRLITIGHSQLALSEKANELWREHVVPVVMIKRKVYEMAKNHAPPRVISEF HHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LKAHLAILIITRKEADLMDRQLTESNESLRTSMPEGWDWGQDPLARIKAVGIKPHLIGGY HHHHHEEEEEECCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCC QPHPWQGWKPTAVNSLWYWLNKPILNF CCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA