Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022969

Identifier: 124022969

GI number: 124022969

Start: 1088862

End: 1089113

Strand: Reverse

Name: 124022969

Synonym: P9303_12641

Alternate gene names: NA

Gene position: 1089113-1088862 (Counterclockwise)

Preceding gene: 124022971

Following gene: 124022966

Centisome position: 40.6

GC content: 56.75

Gene sequence:

>252_bases
GTGGGGAGAGAAGTGGAAGTGCTGTGTGTCCCACCGATCAACCCAAGATCTCTGAGAGTGGGAGATGGGTTGATGAGCTG
TGTCATGGGTGGTTGTGATGTTGATCACAGGCAAGAAAAAACCCCGCAGCGGGCGGGGTTTTGGGGAGGTGTGAGCTGGC
TGTCGTTAGCTAAATCTGGCCCGGTTGTGCCGCTGCCGTTACCGCGCCAGCTCACTGAAAGCTGGCTTCCTAGCAAGCAG
GAGTGTTGCTGA

Upstream 100 bases:

>100_bases
TCATGGCGTTGACCTCTTGCGGCTGAACAGACAGAAGCGCAGCGGAGGAGAGGGTGAGAGCGGAGAGGATGGAAAGTGAG
CGGTTCATGGTGGCGAGGGT

Downstream 100 bases:

>100_bases
TGGAGCCTGGATTTTGTGTGGGAGACCATGAGGTGTTGAAGCCAGGGTTGCCGCCGACTTTGACCAGACCGTTGCTTGTG
ATGCGCAGTTTGAGGGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MGREVEVLCVPPINPRSLRVGDGLMSCVMGGCDVDHRQEKTPQRAGFWGGVSWLSLAKSGPVVPLPLPRQLTESWLPSKQ
ECC

Sequences:

>Translated_83_residues
MGREVEVLCVPPINPRSLRVGDGLMSCVMGGCDVDHRQEKTPQRAGFWGGVSWLSLAKSGPVVPLPLPRQLTESWLPSKQ
ECC
>Mature_82_residues
GREVEVLCVPPINPRSLRVGDGLMSCVMGGCDVDHRQEKTPQRAGFWGGVSWLSLAKSGPVVPLPLPRQLTESWLPSKQE
CC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9075; Mature: 8943

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREVEVLCVPPINPRSLRVGDGLMSCVMGGCDVDHRQEKTPQRAGFWGGVSWLSLAKSG
CCCCEEEEEECCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PVVPLPLPRQLTESWLPSKQECC
CEECCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GREVEVLCVPPINPRSLRVGDGLMSCVMGGCDVDHRQEKTPQRAGFWGGVSWLSLAKSG
CCCEEEEEECCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PVVPLPLPRQLTESWLPSKQECC
CEECCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA