| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022968
Identifier: 124022968
GI number: 124022968
Start: 1087373
End: 1088884
Strand: Direct
Name: 124022968
Synonym: P9303_12631
Alternate gene names: NA
Gene position: 1087373-1088884 (Clockwise)
Preceding gene: 124022967
Following gene: 124022970
Centisome position: 40.53
GC content: 54.56
Gene sequence:
>1512_bases ATGTATTTCGCCACCAAATCCCTCGCCCTGAGCTTCGCAGCCGCAGCTGGTCTTAGCGGCCTCAACACACTCACCGCTCT CTCCGCCCAGGCAGCCACCCGATGCGACAGCGGAATGCTGCTGGGCCGCTACACCTTGAAATCGGAACTCAACAATAAAT ACGTGCGGGCCGGCATTGGTTCCGGTGCCTATGTCGGCGCCAAAAGCAACAGCGTGGGCGGCAGCACCAGCTGGGAAACC TTCGACATCTATGACCTGGGCAATCGAGATGGCCTCAATGGAGGTACCTACGCCCTGCGAAGTACTCAAGATCCCAATCG CTGGGTGAGCGTGAACTCTCAGAACGCACTGAAACTGATGCGTGGCTGCAACACCGCCAGCAAAACCCGTCTGTTCCGCG CCAACAGGGTCGGCAACATCCTGCAGCTTCAATCACTCTCCAATCAGCAATGGGTGATCCAGCGCTCCAACAACATGCTT TACGCCAATGCAGCGACCATGGGCGGCAACGTACCCAAAGCACTGCAATATCGGCTAACGCGCATCGGGTCCGGGCCAAC GAGCCCCAGCCCACAACCGCAGGTCAACCTCAACGGCTGGTTCAGAGGCAATAACAAAGGCGTCTATTCCGTACAACGCA GCGGCAATTCATTCCAGATGAAAGGCTTCCTCAATGGCAAGCCCTTCAATCTGATCACCGGCAACATCCAGGGCAACATC ATTAATGCCAGCTGGAAAAACTACTGCAATCGCAGCACAGGCTCCCTCAAACTGCGCATCACAAGCAACGGTCTGGTCAA AGTCGGCGGCAACCCTGGCTTCAACACCTCATGGTCTCCCACACAAAATCCAGGTTCCATCAGCAACACTCCTGCTTGTC AGCAGCAACAACCGCAGGTCAACCTCAACGGCTGGTTCAGAGGCAATAACAAAGGCGTCTATTCCGCACAACGCAGCGGC AATTCATTCCAAATGAAAGGCTTCCTCAATGGCAAGCCCTTCAATCTGATCACCGGCAACATCCAGGGCAACATCATTAA TGCCAGCTGGAAAAACTACTGCAATCGCAGCACAGGCTCCCTCAAACTGCGCATCACAAGCAACGGTCTGGTCAAAGTCG GCGGCAACCCTGGCTTCAACACCTCATGGTCTCCCACACAAAATCCAGGTTCCATCAGCAACACTCCTGTTTGTCAGCAG CAACAACCGCAGGTCAACCTCAACGGCTGGTTCAGAGGCAATAACAAAGGCGTCTATTCCGCACAACGCAGCGGCAATTC ATTCCAAATGAAAGGCTTCCTCAATGGCAAGCCCTTCAATCTGATCACCGGCAACATCCAGGGCAACATCATTAATGCCA GCTGGAAAAACTACTGCAATCGCAGCACAGGCTCCCTCAAACTGCGCATCACAAGCAACGGTCTGGTCAAAGTCGGCGGC AACCCTGGCTTCAACACCTCATGGTCTCCCACACAAAATCCAGGCTCCATCAGCAACACTCCTGCTTGCTAG
Upstream 100 bases:
>100_bases ACCAACGACAACTCTGCATGCGATCACGGAGATCCTGGGCTCATCGGTGATCTAGCACCGCTTCTCCTTAACAGCACTAC TAATCCTCACCTTTCAACCG
Downstream 100 bases:
>100_bases GAAGCCAGCTTTCAGTGAGCTGGCGCGGTAACGGCAGCGGCACAACCGGGCCAGATTTAGCTAACGACAGCCAGCTCACA CCTCCCCAAAACCCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MYFATKSLALSFAAAAGLSGLNTLTALSAQAATRCDSGMLLGRYTLKSELNNKYVRAGIGSGAYVGAKSNSVGGSTSWET FDIYDLGNRDGLNGGTYALRSTQDPNRWVSVNSQNALKLMRGCNTASKTRLFRANRVGNILQLQSLSNQQWVIQRSNNML YANAATMGGNVPKALQYRLTRIGSGPTSPSPQPQVNLNGWFRGNNKGVYSVQRSGNSFQMKGFLNGKPFNLITGNIQGNI INASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPACQQQQPQVNLNGWFRGNNKGVYSAQRSG NSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPVCQQ QQPQVNLNGWFRGNNKGVYSAQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGG NPGFNTSWSPTQNPGSISNTPAC
Sequences:
>Translated_503_residues MYFATKSLALSFAAAAGLSGLNTLTALSAQAATRCDSGMLLGRYTLKSELNNKYVRAGIGSGAYVGAKSNSVGGSTSWET FDIYDLGNRDGLNGGTYALRSTQDPNRWVSVNSQNALKLMRGCNTASKTRLFRANRVGNILQLQSLSNQQWVIQRSNNML YANAATMGGNVPKALQYRLTRIGSGPTSPSPQPQVNLNGWFRGNNKGVYSVQRSGNSFQMKGFLNGKPFNLITGNIQGNI INASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPACQQQQPQVNLNGWFRGNNKGVYSAQRSG NSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPVCQQ QQPQVNLNGWFRGNNKGVYSAQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGG NPGFNTSWSPTQNPGSISNTPAC >Mature_503_residues MYFATKSLALSFAAAAGLSGLNTLTALSAQAATRCDSGMLLGRYTLKSELNNKYVRAGIGSGAYVGAKSNSVGGSTSWET FDIYDLGNRDGLNGGTYALRSTQDPNRWVSVNSQNALKLMRGCNTASKTRLFRANRVGNILQLQSLSNQQWVIQRSNNML YANAATMGGNVPKALQYRLTRIGSGPTSPSPQPQVNLNGWFRGNNKGVYSVQRSGNSFQMKGFLNGKPFNLITGNIQGNI INASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPACQQQQPQVNLNGWFRGNNKGVYSAQRSG NSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPVCQQ QQPQVNLNGWFRGNNKGVYSAQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGG NPGFNTSWSPTQNPGSISNTPAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54147; Mature: 54147
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFATKSLALSFAAAAGLSGLNTLTALSAQAATRCDSGMLLGRYTLKSELNNKYVRAGIG CEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCEEEEECC SGAYVGAKSNSVGGSTSWETFDIYDLGNRDGLNGGTYALRSTQDPNRWVSVNSQNALKLM CCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCHHHHHHH RGCNTASKTRLFRANRVGNILQLQSLSNQQWVIQRSNNMLYANAATMGGNVPKALQYRLT HCCCCHHHHEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHH RIGSGPTSPSPQPQVNLNGWFRGNNKGVYSVQRSGNSFQMKGFLNGKPFNLITGNIQGNI HCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCEEEECCEECCE INASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPACQQQQPQV EECCHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE NLNGWFRGNNKGVYSAQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGS EEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEECCEECCEEECCHHHHCCCCCCE LKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPVCQQQQPQVNLNGWFRGNNKGVYS EEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE AQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGG ECCCCCEEEEEEEECCCCCEEEECCEECCEEECCHHHHCCCCCCEEEEEEECCCEEEECC NPGFNTSWSPTQNPGSISNTPAC CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYFATKSLALSFAAAAGLSGLNTLTALSAQAATRCDSGMLLGRYTLKSELNNKYVRAGIG CEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCEEEEECC SGAYVGAKSNSVGGSTSWETFDIYDLGNRDGLNGGTYALRSTQDPNRWVSVNSQNALKLM CCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCHHHHHHH RGCNTASKTRLFRANRVGNILQLQSLSNQQWVIQRSNNMLYANAATMGGNVPKALQYRLT HCCCCHHHHEEEECCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHH RIGSGPTSPSPQPQVNLNGWFRGNNKGVYSVQRSGNSFQMKGFLNGKPFNLITGNIQGNI HCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCEEEECCEECCE INASWKNYCNRSTGSLKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPACQQQQPQV EECCHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE NLNGWFRGNNKGVYSAQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGS EEEEEEECCCCCEEEECCCCCEEEEEEEECCCCCEEEECCEECCEEECCHHHHCCCCCCE LKLRITSNGLVKVGGNPGFNTSWSPTQNPGSISNTPVCQQQQPQVNLNGWFRGNNKGVYS EEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE AQRSGNSFQMKGFLNGKPFNLITGNIQGNIINASWKNYCNRSTGSLKLRITSNGLVKVGG ECCCCCEEEEEEEECCCCCEEEECCEECCEEECCHHHHCCCCCCEEEEEEECCCEEEECC NPGFNTSWSPTQNPGSISNTPAC CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA