Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022945

Identifier: 124022945

GI number: 124022945

Start: 1074757

End: 1075608

Strand: Reverse

Name: 124022945

Synonym: P9303_12381

Alternate gene names: NA

Gene position: 1075608-1074757 (Counterclockwise)

Preceding gene: 124022946

Following gene: 124022944

Centisome position: 40.09

GC content: 53.29

Gene sequence:

>852_bases
ATGAATCTCTTGGAACCCCAGGATCTGCCAGATCTTCCCAAGCTGAAGTTGGCCGTTGTGGGCCACGTTGAATGGGTGAC
CTTCCTGTCTACAGATCAATTACCCCAGCCTGGGGTAATCAGCCATGCAGATCATTCTTTTGAAGAGCCCGCTGGCGGTG
GAGCTGTCGTCGCGGTGCAATTGGCTCGGCTCGTTAAACAACCCGTTCAATTCATAACAGCTCTAAGTCGAGATTCATAC
GGTGAAAAGAGTTTTCAAAGACTCCAGCAGCTTGGCTTAAGCCTGACTGTGGCTTGGCGTGATCAACCCACTCGTCGGGC
GATCAGCCTTGTTGATTCTCATGGGGAACGGGCAATTACAGTGATTGGCGAGCGTTTACAACCCAGAGCAAAAGATGCGC
TGGGCTGGGGAGCCCTTGCTGGTTACGACGGTGTTTTTGTGACCGCTGCAGATGCCCCTGCACTGCATCATTGTCGTCAT
GCTGGTGTTATGGCAGCTACTCCTCGCGTTCGTCTAGAGACACTTGAGCAGGCGAATATTCAGCTTGATGCGCTGATTGG
TAGTGGTCTTGATCCAGGCGAACACGTTCCAGATAAAGCTCTCTTTCCAACTCCCCGGCTGAGAATTGCAACTGAAGGAG
CTTTAGGCGGTCAGCTATGGCCTGGGGGACGCTATCAGGCTGTTTCACTGAAGTCTCCAGTCGTGGATGCCTATGGCTGT
GGCGATAGCTTTGCCGCTGGGGTAACTGCAGGTTTGGCTGCTGGTTGGACTGATGAACAGGCGATCAGCCTAGGGGCTCA
CTGCGGTGCAAGCTGTGCAACTCATTTTGGGCCTTACTCCAGTGATGAGTGA

Upstream 100 bases:

>100_bases
CGGCCCAGGCTTGTTACTAGTCAAATCGATAGCCAACAGCCCCATCGGCCTGACCATGCCTTACTGATGCATCCTTTTTC
TATTGAGTGAATCAATCACC

Downstream 100 bases:

>100_bases
GTCTGAGAGTTGGGCGTTGATTCGACCTTCAGACTTGAAGGCAAGCCTGCCAATAGCTTGTGAGCAGCTTGAAGTGAGGG
TCAACCTGATTCACTTAGGC

Product: pfkB family carbohydrate kinase

Products: ADP; D-ribose 5-phosphate

Alternate protein names: Ribokinase Family Sugar Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain Protein; Carbohydrate Kinase PfkB

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITALSRDSY
GEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRH
AGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC
GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE

Sequences:

>Translated_283_residues
MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITALSRDSY
GEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRH
AGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC
GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
>Mature_283_residues
MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITALSRDSY
GEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRH
AGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC
GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.15

Molecular weight: Translated: 29948; Mature: 29948

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQ
CCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LARLVKQPVQFITALSRDSYGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAIT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEE
VIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRHAGVMAATPRVRLETLEQANI
EECHHCCCHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCCEECCCCHHHHHHHHCCE
QLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC
EEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCC
GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
CCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQ
CCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LARLVKQPVQFITALSRDSYGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAIT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEE
VIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRHAGVMAATPRVRLETLEQANI
EECHHCCCHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCCEECCCCHHHHHHHHCCE
QLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC
EEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCC
GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
CCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-ribose

Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA