| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022945
Identifier: 124022945
GI number: 124022945
Start: 1074757
End: 1075608
Strand: Reverse
Name: 124022945
Synonym: P9303_12381
Alternate gene names: NA
Gene position: 1075608-1074757 (Counterclockwise)
Preceding gene: 124022946
Following gene: 124022944
Centisome position: 40.09
GC content: 53.29
Gene sequence:
>852_bases ATGAATCTCTTGGAACCCCAGGATCTGCCAGATCTTCCCAAGCTGAAGTTGGCCGTTGTGGGCCACGTTGAATGGGTGAC CTTCCTGTCTACAGATCAATTACCCCAGCCTGGGGTAATCAGCCATGCAGATCATTCTTTTGAAGAGCCCGCTGGCGGTG GAGCTGTCGTCGCGGTGCAATTGGCTCGGCTCGTTAAACAACCCGTTCAATTCATAACAGCTCTAAGTCGAGATTCATAC GGTGAAAAGAGTTTTCAAAGACTCCAGCAGCTTGGCTTAAGCCTGACTGTGGCTTGGCGTGATCAACCCACTCGTCGGGC GATCAGCCTTGTTGATTCTCATGGGGAACGGGCAATTACAGTGATTGGCGAGCGTTTACAACCCAGAGCAAAAGATGCGC TGGGCTGGGGAGCCCTTGCTGGTTACGACGGTGTTTTTGTGACCGCTGCAGATGCCCCTGCACTGCATCATTGTCGTCAT GCTGGTGTTATGGCAGCTACTCCTCGCGTTCGTCTAGAGACACTTGAGCAGGCGAATATTCAGCTTGATGCGCTGATTGG TAGTGGTCTTGATCCAGGCGAACACGTTCCAGATAAAGCTCTCTTTCCAACTCCCCGGCTGAGAATTGCAACTGAAGGAG CTTTAGGCGGTCAGCTATGGCCTGGGGGACGCTATCAGGCTGTTTCACTGAAGTCTCCAGTCGTGGATGCCTATGGCTGT GGCGATAGCTTTGCCGCTGGGGTAACTGCAGGTTTGGCTGCTGGTTGGACTGATGAACAGGCGATCAGCCTAGGGGCTCA CTGCGGTGCAAGCTGTGCAACTCATTTTGGGCCTTACTCCAGTGATGAGTGA
Upstream 100 bases:
>100_bases CGGCCCAGGCTTGTTACTAGTCAAATCGATAGCCAACAGCCCCATCGGCCTGACCATGCCTTACTGATGCATCCTTTTTC TATTGAGTGAATCAATCACC
Downstream 100 bases:
>100_bases GTCTGAGAGTTGGGCGTTGATTCGACCTTCAGACTTGAAGGCAAGCCTGCCAATAGCTTGTGAGCAGCTTGAAGTGAGGG TCAACCTGATTCACTTAGGC
Product: pfkB family carbohydrate kinase
Products: ADP; D-ribose 5-phosphate
Alternate protein names: Ribokinase Family Sugar Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITALSRDSY GEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRH AGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
Sequences:
>Translated_283_residues MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITALSRDSY GEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRH AGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE >Mature_283_residues MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITALSRDSY GEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRH AGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15
Molecular weight: Translated: 29948; Mature: 29948
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQ CCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LARLVKQPVQFITALSRDSYGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAIT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEE VIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRHAGVMAATPRVRLETLEQANI EECHHCCCHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCCEECCCCHHHHHHHHCCE QLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC EEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCC GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE CCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQ CCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LARLVKQPVQFITALSRDSYGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAIT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEE VIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRHAGVMAATPRVRLETLEQANI EECHHCCCHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCCEECCCCHHHHHHHHCCE QLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVVDAYGC EEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCC GDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE CCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-ribose
Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA