Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022899

Identifier: 124022899

GI number: 124022899

Start: 1044904

End: 1045041

Strand: Reverse

Name: 124022899

Synonym: P9303_11921

Alternate gene names: NA

Gene position: 1045041-1044904 (Counterclockwise)

Preceding gene: 124022900

Following gene: 124022896

Centisome position: 38.96

GC content: 48.55

Gene sequence:

>138_bases
ATGTTCGGTCGTCGAAACAAAAAAGATGCTCCCAAGGAGGAACCCGCAGAAACAGATCTTGAAAGGGGTTACAGGCTCGC
TGCCGCGAAGCAAAAGGAGATTTTGAAAGAGCTTCTCGCACAAAAACCAAAGCCCTGA

Upstream 100 bases:

>100_bases
CTGCGCACGCTTACGCCTGTTCTTGCCATCGCTGGCCATGTGAGACCATCAGCTGAGCAAGCCTTTCAGCTCCTCAATGC
TCAGTAAGTCCATAACTGGG

Downstream 100 bases:

>100_bases
CTCCCTACCACTGGTCTAGGGGCAGAGTTGTTGAAACGACCCTCACCACTGGGCTCACTTGGCCCTCCAGCCCACTTTTT
TCAGTCTTTTCCATCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 45

Protein sequence:

>45_residues
MFGRRNKKDAPKEEPAETDLERGYRLAAAKQKEILKELLAQKPKP

Sequences:

>Translated_45_residues
MFGRRNKKDAPKEEPAETDLERGYRLAAAKQKEILKELLAQKPKP
>Mature_45_residues
MFGRRNKKDAPKEEPAETDLERGYRLAAAKQKEILKELLAQKPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5194; Mature: 5194

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRRNKKDAPKEEPAETDLERGYRLAAAKQKEILKELLAQKPKP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFGRRNKKDAPKEEPAETDLERGYRLAAAKQKEILKELLAQKPKP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA