| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022895
Identifier: 124022895
GI number: 124022895
Start: 1043766
End: 1044107
Strand: Reverse
Name: 124022895
Synonym: P9303_11881
Alternate gene names: NA
Gene position: 1044107-1043766 (Counterclockwise)
Preceding gene: 124022896
Following gene: 124022894
Centisome position: 38.92
GC content: 46.2
Gene sequence:
>342_bases ATGGACAAGAAAGGCGCTAAGGGGTATTGGATCAGCACTTCAACAGTCACCAATCCAGCTTTGTTTGCTGAGTACGTTGA GAAGGTTGGACCATGGCTCAAAGAAGTTGATGGAGTGGTTTTTGCTAAAGACACAGAACCTCAAGGGAAAGAGAAGACAG AAGGAGCGAACTTGGCAGTGATTTGTGAGTTCCCTTCGATGAGAGCAGCAGTCGATGCTTATGAATCAGCTGAGTATCAA GAGCTAAGCAAAATACGTAACGCAGCCACAGAGAATGCAACCTTCACGATCATGGAAGGTATGGATGAAGCGGCAAAACT AAGGAGAGCCATGGGTAAGTAG
Upstream 100 bases:
>100_bases TCTGTTGAAACCGTTTCCCTATTGGGACCCACTACAAAATTGGTGACAAACCCAATACACGAATAAAGTGCGAAGCTCTA TGGGTTTCTAGAAGCTATGC
Downstream 100 bases:
>100_bases TCGTTTCTTCAAACTGTTACTTGGGTGACATCGCCTTTGATGTAAATCGACTAGAAGGCTGGTGCTTTTTTTGTTTGACA TGACCTTTCTGATGCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAVICEFPSMRAAVDAYESAEYQ ELSKIRNAATENATFTIMEGMDEAAKLRRAMGK
Sequences:
>Translated_113_residues MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAVICEFPSMRAAVDAYESAEYQ ELSKIRNAATENATFTIMEGMDEAAKLRRAMGK >Mature_113_residues MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAVICEFPSMRAAVDAYESAEYQ ELSKIRNAATENATFTIMEGMDEAAKLRRAMGK
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12430; Mature: 12430
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAV CCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCEEE ICEFPSMRAAVDAYESAEYQELSKIRNAATENATFTIMEGMDEAAKLRRAMGK EECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHCC >Mature Secondary Structure MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAV CCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCEEE ICEFPSMRAAVDAYESAEYQELSKIRNAATENATFTIMEGMDEAAKLRRAMGK EECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA