Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022895

Identifier: 124022895

GI number: 124022895

Start: 1043766

End: 1044107

Strand: Reverse

Name: 124022895

Synonym: P9303_11881

Alternate gene names: NA

Gene position: 1044107-1043766 (Counterclockwise)

Preceding gene: 124022896

Following gene: 124022894

Centisome position: 38.92

GC content: 46.2

Gene sequence:

>342_bases
ATGGACAAGAAAGGCGCTAAGGGGTATTGGATCAGCACTTCAACAGTCACCAATCCAGCTTTGTTTGCTGAGTACGTTGA
GAAGGTTGGACCATGGCTCAAAGAAGTTGATGGAGTGGTTTTTGCTAAAGACACAGAACCTCAAGGGAAAGAGAAGACAG
AAGGAGCGAACTTGGCAGTGATTTGTGAGTTCCCTTCGATGAGAGCAGCAGTCGATGCTTATGAATCAGCTGAGTATCAA
GAGCTAAGCAAAATACGTAACGCAGCCACAGAGAATGCAACCTTCACGATCATGGAAGGTATGGATGAAGCGGCAAAACT
AAGGAGAGCCATGGGTAAGTAG

Upstream 100 bases:

>100_bases
TCTGTTGAAACCGTTTCCCTATTGGGACCCACTACAAAATTGGTGACAAACCCAATACACGAATAAAGTGCGAAGCTCTA
TGGGTTTCTAGAAGCTATGC

Downstream 100 bases:

>100_bases
TCGTTTCTTCAAACTGTTACTTGGGTGACATCGCCTTTGATGTAAATCGACTAGAAGGCTGGTGCTTTTTTTGTTTGACA
TGACCTTTCTGATGCATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAVICEFPSMRAAVDAYESAEYQ
ELSKIRNAATENATFTIMEGMDEAAKLRRAMGK

Sequences:

>Translated_113_residues
MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAVICEFPSMRAAVDAYESAEYQ
ELSKIRNAATENATFTIMEGMDEAAKLRRAMGK
>Mature_113_residues
MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAVICEFPSMRAAVDAYESAEYQ
ELSKIRNAATENATFTIMEGMDEAAKLRRAMGK

Specific function: Unknown

COG id: COG5470

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12430; Mature: 12430

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAV
CCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCEEE
ICEFPSMRAAVDAYESAEYQELSKIRNAATENATFTIMEGMDEAAKLRRAMGK
EECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MDKKGAKGYWISTSTVTNPALFAEYVEKVGPWLKEVDGVVFAKDTEPQGKEKTEGANLAV
CCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCEEE
ICEFPSMRAAVDAYESAEYQELSKIRNAATENATFTIMEGMDEAAKLRRAMGK
EECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA